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7 protocols using n acetylneuraminic acid

1

EGCG Purification and Compound Acquisition

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Epigallocatechin-3-gallate (EGCG, 95% pure) was purchased from Thermo Fisher Scientific (AC449010100). Heparin and N-acetylneuraminic acid were obtained from Carbosynth Ltd (YH09354 and MA0076, respectively).
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2

Carbohydrate Metabolism in E. coli EHV2

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E. coli EHV2 (107 cells) were cultured in 3 ml of M9 minimal medium52 containing 10 mM of either glucose (Glc), galactose (Gal), N-acetylglucosamine (GlcNAc), N-acetylgalactosamine (GalNAc), fucose (Fuc) and N-acetylneuraminic acid (Sia) as single carbohydrate source at 37 °C for 24 h. The milk oligosaccharides 3SL and 6SL were tested as 5 mM in 3 ml of M9 minimal medium supplemented with PBS or sterile-filtered mouse caecal fluid (1.5%, v/v). All neutral monosaccharides were purchased from Sigma-Aldrich except N-acetylneuraminic acid from Carbosynth (Berkshire, UK). The oligosaccharides 3SL and 6SL were obtained from Glycom A/S (Lyngby, Denmark). Cell density was determined by OD 600 values at 3, 6, 12 and 24 h. For determination of the growth phenotype in nanT mutant and ManX mutant, parental and mutant strains were cultured in modified M9 minimal medium (additional 0.003% L-histidine, 0.004% leucine and 0.01% yeast extract) containing 10 mM of glucose or N-acetylneuraminic acid.
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3

Oligosaccharide Standards for Research

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The oligosaccharide standards; 2′-Fucosyllactose (2′FL), Lacto-N-tetraose (LNT), 3′-Sialyllactose (3′SL), 6′-Sialyllactose (6′SL), Disialyllactose (DSL), Lacto-N-hexaose (LNH), N-Acetylneuraminic acid (Sialic Acid), LS-tetrasaccharide c (LSTc), Lacto-N-neotetraose (LNnT) and Lacto-N-neohexaose (LNnH) were purchased from Carbosynth Ltd. (Berkshire, UK) and lactose was obtained from VWR (Dublin, Ireland).
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4

Characterization of Lactobacillus Spp.

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L. antri was from the DSMZ collection (#16041) and the genomic DNA from L. sakei 23K was kindly provided by Prof. Monique Zagorec (Unité Flore Lactique et Environnement Carné, INRA, France). N-acetyl-D-mannosamine, N-acetylneuraminic acid and other sugars were from Carbosynth (Berkshire, UK). ManNAc dehydrogenase was from Kikkoman (Japan, Tokio). Other reagents were from Sigma-Aldrich (Madrid, Spain).
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5

HIV-1 Entry and Replication Assay

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M-CSF–derived or GM-CSF–derived MDMs were plated at 0.5 × 106 cells/well in 24-well plates. The cells were preincubated with 300 μl of purified mAbs (10 μg/ml), N-acetylneuraminic acid (10 mM SA; Carbosynth, Compton, West Berkshire, United Kingdom), lactose (50 mM), sialyllactose (GM3, 10 mM), recombinant-scaffolded HIV-1–V1V2 proteins (20 μg/ml), PNGase-treated recombinant HIV-1–V1V2 proteins (20 μg/ml), neuraminidase A–treated recombinant HIV-1–V1V2 proteins (20 μg/ml), or varying concentrations of JR-FL FD gp145 trimer for 30 min at room temperature. Following aspiration and washing, 300 μl of fresh infection medium containing purified HIV-1 was added to each monolayer, and the plate was centrifuged at 2500 rpm for 15 or 30 min at 37°C (for HIV-1 entry experiments) or for 90 min at 37°C (for HIV-1 replication experiments). For HIV-1 entry experiments, unadsorbed virus was removed, and the cells were washed 3 times with PBS to remove residual virus. The cells were subsequently lysed, and HIV-1 entry was determined by qRT-PCR or by qPCR. For HIV-1 replication, unabsorbed virus was removed, and the cells were incubated at 37°C/5% CO2 in 1 ml of M-CSF or GM-CSF medium containing Polybrene. Cells were harvested and stained, and the percentage of HIV-1–infected cells was determined by flow cytometry.
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6

Synthesis and Characterization of Gold Nanoparticles

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N-acetylneuraminic acid was purchased from Biosynth-Carbosynth (Compton, UK). Chloroauric acid solution (HAuCl4) was obtained from Sigma-Aldrich (Poole, UK). Sodium hydroxide (NaOH) was supplied from Loba Chemie (Mumbai, India). Deionized water was generated through Milli Q Millipore (Billerica, MA, USA) and used throughout the study.
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7

Synthesis and Characterization of Functionalized Polymers

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ABDV was from Wako Chemicals GmbH (Neuss,
Germany). EGDMA and ARS were from Acros Organics. 4-Vinylphenylboronic
acid (FM3), ammonium hydrogen difluoride (NH4HF2), acetic acid, acetic anhydride, phenol, ammonium acetate, formic
acid, dimethylformamide (DMF), dry methanol (MeOH), DMSO-d6, and methanol-d4 (CD3OD) were
from VWR chemicals. All solvents for high-performance liquid chromatography
(HPLC) analysis were of HPLC grade and were purchased from VWR. 2-Aminoethyl
methacrylate hydrochloride (FM2) was received from Polysciences. Amino-functionalized
macroporous silica beads (NH2@SiO2) with an
average particle size of 30 μm, a surface area (S) of 45 m2g–1, an average pore diameter (Dp) of 47.5 nm, and a pore volume (Vp) of 0.81 mL/g were purchased from Fuji Silysia Chemical Ltd.
(Kozojicho, Kasugai Aichi, Japan). Monosaccharides Glc, galactose
(Gal), Fru, and TBA hydroxide (TBA–OH) 1 M in methanol were
obtained from Sigma-Aldrich. D-GlcA was received
from Fluka. N-Acetylneuraminic acid, N-glycolylneuraminic acid (Neu5Gc), GalNAc, ManNac, 2,6′-sialyllactose
sodium salt (6SL), and 2,3′-sialyllactose sodium salt (3SL)
were purchased from Carbosynth Ltd. (UK).
EGDMA was passed through
a column of activated basic alumina to remove the inhibitor and stored
at −20 °C before polymerization. N-3,5-Bis(trifluoromethyl)-phenyl-N′-4-vinylphenylurea (FM1) was synthesized as previously
reported.33 (link)
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