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Pmal c2e

Manufactured by New England Biolabs

PMAL-c2e is a laboratory product produced by New England Biolabs. It is used for protein purification purposes. The core function of PMAL-c2e is to facilitate the purification of recombinant proteins expressed in E. coli.

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5 protocols using pmal c2e

1

Pull-Down Assay for α1.2 Subunit-Actinin Interaction

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Expression, purification, and pull-down assays using the CaV1.2 α11.2 subunit-GST fusion proteins were performed essentially as before (32 (link), 50 (link), 51 (link)). Wild Type (WT) and mutant (K1647A, Y1649A, I1654A) rabbit α11.2 AAs 1576-1733 were expressed as GST-fusion proteins using the expression vector pGEX-4T1. Human α-actinin-1 (AAs 391-892)-MBP fusion protein was produced from the expression vector, pMAL-c2e (New England Biolabs, NEB). Expression and purification of MBP-tagged α-actinin-1 was performed according to the manufacturer’s protocol (NEB). For pull-down assays, GST-tagged WT and mutant α11.2 AAs 1576-1733 were expressed in E. coli before extraction and adsorption of 150 μg onto glutathione-Sepharose, washing, and incubation with 100 μg of MBP-purified α-actinin-1. Resins were washed three times in ice-cold TBS plus 0.1% Triton X-100 and extracted with 1.5x SDS-PAGE sample buffer at 90 °C for 5 min. Extracted proteins were loaded onto 7.5% polyacrylamide gels, fractionated by SDS-PAGE and transferred to PVDF membranes for immunoblot detection with anti-GST antibodies to assess relative amounts of immobilized α11.2 bait and anti-MBP antibodies to determine relative amounts of α-actinin pulled down by the resin.
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2

In vitro protein-protein interaction assay

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For in vitro pull-down assays, we used the GST-CT1 plasmid, which covers rabbit α11.2 AAs 1513-1733 in the GST-fusion protein expression vector pGEX-4T1 (GE healthcare) as described (32 (link)). The site-specific mutations K1647A, Y1649A, and I1654A were generated via QuikChange II as above (see Supporting Information, Table S4). A cDNA fragment encoding AAs 391-892 of human α-actinin-1 was sub-cloned into KpnI/EcoRI digested plasmid DNA of the MBP fusion protein expression vector, pMAL-c2e (NEB). For identification of CaV1.2 expressing HEK293T/17 transfectants in electrophysiological, flow cytometry and surface biotinylation studies, we used a rat α11.2 (GenBank ID: M67515.1) construct that carried an HA tag in the S5-H5 extracellular loop of domain II, which only modestly reduces current density in heterologous expression systems (25 (link), 49 (link)). This α11.2 cDNA was subcloned into a SalI/SacII restriction endonuclease digested pECFP-C1 vector (Clontech). The site-specific mutations K1647A, Y1649A, and I1654A in the rat α11.2 IQ domain were again generated via QuikChange II with rat-appropriate oligonucleotide primer sets (see Supporting Information, Table S5).
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3

Recombinant Expression and Purification of NoV P-Domain

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Each of GII.3 (TCH04-577) and GII.4 Sydney 2012 P-domain sequence was cloned into the expression vector pMal-C2E (New England BioLabs). The recombinant P-domain was expressed with an N-terminal His6-maltose-binding protein (MBP) tag, and a tobacco etch virus (TEV) cleavage site between the MBP and P-domain in E. coli BL21(DE3) and purified using His-Trap (GE Healthcare). The His-MBP tag was then removed using TEV protease and separated from the P-domain by purifying it once again using His-Trap (GE Healthcare), MBPTrap (GE Healthcare) affinity columns, and size exclusion chromatography as previously described61 (link). The purified P-domain was concentrated and stored in a buffer containing 20 mM Tris-HCl (pH 7.2), 150 mM NaCl, and 2.5 mM MgCl2. The recombinant M4 was expressed in E. coli WK6 strain. The periplasmic proteins were extracted by osmotic shock using Tris/EDTA/Sucrose (TES) buffer, and His-tagged M4 was purified from the periplasmic extract using a High-Trap HP Ni-chelating column (GE Healthcare, US).
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4

Expression and Purification of PP1C and PP5C

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Expression constructs for human PP1C (PPP1CA; Human genome nomenclature committee (HGNC) ID: HGNC:9281) and PP5C (PPP5C; HGNC:9322) were created using standard cloning methods as previously described.6 (link),20 (link),22 (link),23 (link) Expression and purification of PP5C was performed essentially as described previously.22 (link),23 (link) For PP1C, the commercial vector pMal-c2E (New England Biolabs) was used to express the N-terminal maltose binding protein (MBP) fusion to the PPP1CA ORF in BL21(DE3) Tuner pLacI cells (Novagen). The MBP-PP1C fusion protein was purified using heparin-sepharose affinity chromatography. Following digestion with enterokinase (New England Biolabs), PP1C was separated from MBP by anion exchange chromatography on Q-sepharose HP (GE Life Sciences). Phosphatase preparations were divided into aliquots and stored at −80 °C (PP1C storage buffer: 20 mM tris pH 7.4, 0.01 mM EDTA, 0.01% CHAPS, 1 mM MnCl2; PP5C storage buffer: 40 mM tris pH 7.5, 1 mM tris-carboxyethyl phosphine, 1 mM sodium azide). Working stocks of enzymes for low throughput confirmation assays were stored at −20 °C in tris buffer containing 50% glycerol, 2 mM DTT, 0.1 mg/mL BSA and 2 mM MnCl2.
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5

Expressing and Purifying Kinesin Motors

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Human GFP-Kif4 motor (residues 1–356), GFP-Kif3A motor (residues 1–354) and GFP-Kif17 motor (residues 1–335) were kind gifts of G. Kreitzer (Weil Cornell Medical College, NY). Mouse Kif4 full length was obtained from Open Biosystems and cloned into the Clontech GFP-C1 vector to prepare mouse GFP-Kif4. Human Kif4 fragments were subcloned into a maltose binding protein (MBP) vector pMAL-c2E (New England Biolabs) from the GFP-C1 vector after digesting with EcoRI and SalI and were verified by sequencing.
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