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6 protocols using reblot

1

Western Blot Analysis of TGFβR1

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Polyvinylidene difluoride membranes were probed with anti-TGFβR1 antibody (polyclonal rabbit anti-human antibody 1:5,000; Abcam, Cambridge, United Kingdom) and detected using horseradish peroxidase–conjugated secondary antibodies (1:1,000; Calbiochem, San Diego, CA). Membranes were stripped with ReBlot (Millipore, Billerica, MA) and re-probed for loading control (anti-β-actin; 1:1,000; Invitrogen). Protein band intensities were quantified using ImageJ software (NIH), and data were expressed as relative fold change to untreated controls.
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2

Huntingtin Protein Detection Protocol

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Proteins were separated by SDS-PAGE using 3–8% Tris-acetate gels or 4–12% Tris-bis gels (Life Technologies) then transferred to nitrocellulose using iBlot semi-dry transfer apparatus (Life Technologies) or Trans-Blot Turbo (BioRad) and developed using SuperSignal West Pico Chemiluminescent Substrate (Thermo Scientific). Statistical analysis was performed using Microsoft Excel or Prism (GraphPad Software). Pixel intensity quantification was performed using ImageJ (NIH) and signal for Huntingtin was standardized to signal for GAPDH. Some blots were stripped before re-probed using Reblot (Millipore) per manufacturer’s instructions. The stripping buffer is pH 13.3.
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3

Western Blot Analysis of TRPC6

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Proteins preparation homogenates were mixed with 5x protein sample buffer (62 mM Tris-HCl pH 6.8, 2% SDS, 10% glycerol, 5% ß-mercaptoethanol, and 0.05% bromophenol blue as the tracking dye), and heated at 95°C for 5 minutes. Samples were then separated on 4-20% SDS-PAGE gels and transferred into 0.22 µm nitrocellulose membranes (Bio-Rad) using a Mini Trans-Blot Cell (Bio-Rad). Membranes were blocked in 5 % non-fat dry milk in PBS 0.1% Tween and incubated overnight at 4°C with anti-TRPC6 antibody (Alomone labs ACC-017, dilution 1:200). This was followed by a 1 hour incubation with a matched horseradish peroxidase labeled secondary antibody (Jackson, 1:3000). Immunoreactivity was detected using chemiluminescence detection kit reagents and a Chimidoc Station (Bio-Rad). To standardize for sample loading, the blots were subsequently stripped using a commercially available kit following the manufacturer's instructions (Reblot; Millipore), and reprobed with an anti-β-actin antibody (Sigma-Aldrich A5060, 1/1000) as an internal control for protein loading.
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4

Protein Expression Analysis by Western Blot

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Western blotting was performed as described. Cells were washed once with ice-cold PBS and artificial cerebro-spinal fluid (Sigma-Aldrich, CA, United States). To normalize for protein load, membranes were reblotted (Re-Blot, Chemicon, United States) and incubated with an appropriate control antibody (see section “Results”). BSA method was applied to quantify the basic expression of loading proteins (Bio-Rad, United States). Blotting images were carried out using Image J (MIT, Boston, MA, United States). The representative image is taken from three repeated trials. Most western blot studies were in neurons, except IGF-1 analysis in astrocytes.
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5

Autophagy Regulation by Lacritin in Corneal Cells

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Subconfluent CRL-11515 cells treated with 0.001% or 0.004% BAK for 1 minute in the absence or presence of lacritin were lysed (50 mM Tris-HCl [pH 7.5], 150 mM NaCl, 1 mM EDTA, 0.5% SDS, and 1:100 protease inhibitor) to extract protein. Total protein was measured by the Micro BCA Protein Assay kit (Thermo Scientific, Nepean, ON) and 20 μg of protein was loaded per well. Protein was separated on a 10% PAGE gel and transferred to a nitrocellulose membrane. Autophagy was estimated by Western blotting for the autophagy marker LC3-II using anti-LC3-II antibody (Sigma-Aldrich, St. Louis, MO) at a dilution of 1:1,000 followed by anti-rabbit horseradish peroxidase-conjugated secondary antibody (1:3,000) and signal was detected by enhanced chemiluminescence (Pierce Biotechnology, Rockford, IL) with the ChemiGenius 2 Imaging System (Syngene, Frederick, MD). To ensure equal protein loading, nitrocellulose membranes were stripped (REblot; Chemicon International, Temecula, CA) and reprobed with anti-GAPDH antibody at a dilution of 1:5,000 (Cedarlane Laboratories, Hornby, ON, Canada). Intensities were quantified using the FluorChem 8000 (Alpha Innotech, San Leandro, CA) and corrected for background. The densitometric ratio of lipidated LC3-II/GAPDH is presented.
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6

Tissue Lysate Microarray Protocol

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Tissue lysate microarray was processed as previously described 70 . Briefly, serially diluted lysates were spotted onto FAST slides (Schleicher & Schuell BioSciences, Keene, NH, USA) using a robotic GeneTAC arrayer (Genomic Solutions, Inc., Ann Arbor, MI, USA). After printing, the slides were blotted sequentially with Re-Blot (Chemicon, Billerica, MA, USA), I-Block and a biotin blocking system (Dako, Capinteria, CA, USA), probed with primary antibodies and incubated with biotin-conjugated secondary antibodies. The signals were then amplified using a Catalyzed Signal Amplification kit (DakoCytomation, Carpinteria, CA, USA) according to the manufacturer's instructions. The processed slides were scanned and quantified using the Microvigene software (VigeneTech Inc., North Billerica, MA, USA) and the quantitative values of 5 consistently expressed proteins (p38, JNK, ERK, mTor and GSK) as internal controls.
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