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2 protocols using densitometry

1

Western Blot Analysis of Signaling Proteins

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The expression levels of p-AMPK, p-P65NF-κB, p-P38MAPK, Bace1, and APP were analyzed by Western blotting. The protein samples were heated at 100 °C for 5 min with a loading buffer containing 0.125 M Tris-HCl (pH 6.8), 20% glycerol, 4% SDS, 10% β-mercaptoethanol, and 0.002% bromophenol blue. The samples were then separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene (PVDF) membranes. The membranes were incubated with 3% bovine serum albumin (BSA) in Tris-buffered saline with Tween (TBST) (10 mmol/L Tris at pH 7.5, 150 mmol/L NaCl, 0.05% Tween-20) and probed with corresponding primary antibodies (anti-p-AMPK, anti-p-P38MAPK, anti-p-P65NF-κB, anti-BACE1, and anti-APP; Cell Signaling Technology, Boston, USA) at 4 °C overnight. After incubation with horseradish peroxidase-coupled secondary antibodies for 2 h at room temperature, the protein bands were quantified by densitometry (Syngene, UK).
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2

Western Blot Analysis of Apoptosis Regulators

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Mitogen-stimulated PBMCs were sorted on day 6 post-stimulation on the MoFlo Astrios Cell Sorter at the Duke Cancer Institute Flow Cytometry Shared Resource. Cells were pelleted and washed in PBS and lysed in 0.1% Triton-containing buffer with cOmplete protease inhibitors (Sigma-Aldrich, 11697498001). Protein lysates were run on NuPage 4–12% gradient gels (ThermoFisher, NP0322BOX) in MES buffer and transferred to PVDF membrane (GE Healthcare). Membranes were blocked in 5% milk in TBST and stained with primary antibody overnight at 4°C. Membranes were then washed in TBST and incubated with secondary antibody diluted in 5% milk in TBST for 1hr at room temperature. Protein levels were quantified by densitometry (Syngene) and normalized to β-actin levels. Antibodies used for protein expression are as follows: Mouse anti-BCL-2 (BD Biosciences, BD551107), Rabbit anti-MCL-1 (Santa Cruz, sc-819), Rabbit anti-BCL-XL (Cell Signaling Technology, 2762S), Rabbit anti-β-actin (Rockland, 600-401-886).
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