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4 protocols using anti cd45ra ecd

1

Comprehensive T-cell Phenotyping by Flow Cytometry

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One million T-cells were stained with the following Ab cocktail: anti-CD3 Brilliant Violet 570 (Biolegend, CA, USA), anti-CD4 Brilliant Violet 510 (Biolegend, CA, USA), anti-CD8a APC-Cy7 (BD Biosciences, CA, USA), anti-4-1BB FITC (eBioscience, CA, USA), anti-CD127 APC-AF700 (Beckman Coulter, CA, USA), anti-CD45RA ECD (Beckman Coulter, CA, USA), anti-CCR7 Brilliant Violet 421 (Biolegend, CA, USA), anti-LAG-3 APC (R&D Systems, Minneapolis, MN), anti-CD25 PE-Cy7 (BD Biosciences, CA, USA), anti-CTLA-4 PE-Cy5 (BD Biosciences, CA, USA), anti-TIM3 Percp-eFluor710 (eBioscience, CA, USA) and anti-PD-1 PE (BD Biosciences, CA, USA). After 15 min, T-cells were washed with PBS–0.1% FBS and analyzed using a FACSAria flow cytometer (BD Biosciences, Stockholm, Sweden); data analysis was performed using FlowJo software.
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Comprehensive PBMC Immunophenotyping Protocol

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Peripheral blood mononuclear cells (PBMCs) were stained in four panels containing anti-CD3-PacificBlue (PacBlue) (antibodies from BD Biosciences unless otherwise indicated), anti-CD3-Alexa700, anti-CD25-PE-Cy7, anti-CD38-PE, anti-HLA-DR-PE-Cy7, anti-CCR5-APC, anti-CD123-PerCP-Cy5.5, anti-CD16-PacBlue, anti-CD80-FITC, anti-CD83-PE, anti-CD86-APC, anti-PD1-FITC, anti-PD-L1-PE, anti-HLA class I-APC, anti-CD69-APC-Cy7; anti-CD4-Qdot655, anti-CD8-PE-Cy5.5, anti-CD14-Qdot605 (Invitrogen); anti-CD45RA-ECD, anti-CD127-PE, anti-HLA-DR-ECD, anti-CD20-ECD (Beckman Coulter); anti-CD11c-Alexa700 (eBioscience); and anti-CD27-APC-Cy7 (BioLegend). A staining reagent for dead cells (Invitrogen Aqua Live/Dead Fixable Stain) was included. Cells were then washed and fixed in PBS containing 1% paraformaldehyde or permeabilized using a FOXP3 Fix/Perm kit (BioLegend) according to the manufacturer's instructions, intracellularly stained with anti-Ki67-Alexa 488 (BD Biosciences), anti-FOXP3-PacBlue, anti-T-Bet-BV711 (BioLegend), and anti-Eomes-eFluor 660 (eBioscience), fixed, and analyzed with a LSR II cytometer (Becton Dickinson) and FlowJo.
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3

Multiparameter Immune Cell Analysis

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We used the following fluorescence-conjugated monoclonal antibodies and staining reagents: anti-CD3-v500, anti-CD8-allophyocyanine (APC)-H7, anti-CD27-phycoerythrine (PE), interleukin 2 (IL-2)-fluorescein isothiocyanate (FITC), tumor necrosis factor α (TNF-α)-Alexa 700, and CD107a-APC (all BD Biosciences, Oxford, United Kingdom); anti-CD4-peridinin chlorophyll (PerCP), anti-interferon γ (IFN-γ) PE-cyanine 7, anti-CD154 Pacific-Blue (BioLegend, Cambridge, United Kingdom), anti-CD45RA-ECD (Beckman Coulter, United Kingdom), and Yellow live-dead stain (Invitrogen, Paisley, United Kingdom).
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4

Isolation and Sorting of CD4+ T Cell Subsets

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All participants underwent leukaphereses performed as outpatients. PBMC were isolated and viably cryopreserved. Frozen PBMC were thawed and CD4 T cells enriched with the EasySep™ Human CD4 + T Cell Negative Selection Enrichment Kit (Stemcell). Cells were stained with Live/Dead Fixable Aqua (Life Technologies) and the following monoclonal antibodies cocktail: anti-CD3-FITC, anti-CD4-AlexaFluor700, anti-CCR7-PE-Cyanine7, anti-CD27-APC, anti-HLA-DR-APC H7, anti-CD57-Brilliant Violet 421, and anti-CD95-PE (Becton Dickinson) as well as anti-CD45RA-ECD (Beckman Coulter). HLA-DR- CD4 + T cell subpopulations were sorted on a FACS ARIA II flow cytometer (BD Biosciences) at >97% purity. Dry pellets were snap-frozen at −80 °C. Flow cytometry data were analyzed on FACSDiva v8.0.1 (BD Biosciences) and FlowJo v8.7 (Tree Star). Sorting schema is provided in Supplementary Fig. 2.
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