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8 protocols using meropenem

1

Analytical Standards for In Vitro Susceptibility Testing

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Analytical reference standards of meropenem (as trihydrate; Tokyo Chemical Industry Co. Ltd.) and amikacin (PHR1654; Sigma-Aldrich) were used for in vitro susceptibility testing. For dosing simulation in the hollow-fiber infection model experiments, clinical formulations of meropenem (meropenem trihydrate powder for injection; Ranbaxy Australia Pty. Ltd.) and amikacin (DBL amikacin injection; Hospira Australia Pty. Ltd.) were used. For meropenem, a fresh 12.5-mg/mL dosing stock solution was prepared from the clinical formulation and kept as 1-mL aliquots in a −80°C freezer for preparation of the doses. For each meropenem dose, an aliquot was thawed immediately before dosing and the appropriate volume constituted with sterile broth, namely, CaMH (final volume, 20 mL) in a dosing syringe. Similarly, a 10-mg/mL amikacin dosing stock solution was prepared and stored in a refrigerator and an appropriate volume constituted with sterile broth (final volume, 20 mL) for dosing.
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2

Antibiotic Stock Preparation and Storage

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Meropenem (Tokyo Chemical Industry Co. Ltd., Tokyo, Japan), sulbactam (Acros Organics, Lot: A0405260, Shanghai, China) and fosfomycin (Wako Pure Chemical Industries, Ltd., Osaka, Japan) were obtained from their respective manufacturers. Stock solutions of these antibiotics were prepared in sterile Milli-Q water, filter-sterilised with a 0.22 µm polyvinylidene difluoride (PVDF) syringe filter, aliquoted and stored at −80 °C until required. Before each susceptibility test, an aliquot of the drug was thawed and diluted to the desired concentrations with cation-adjusted Mueller-Hinton II (CA-MH) broth. Broth or agar containing fosfomycin was supplemented with 25 mg/L of glucose-6-phosphate (Sigma-Aldrich, St. Louis, MO, USA).
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3

Antimicrobial Powder Procurement Protocol

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Meropenem and ceftazidime powder were obtained from Tokyo Chemical Industry Co., Ltd. (TCI) (Portland, OR, USA). Ceftriaxone powder was purchased from Sigma-Aldrich, Inc. (St. Louis, MO, USA). Ertapenem was provided by Merck (Rahway, NJ, USA). Ammonium acetate was purchased from Sigma Life Sciences (St. Louis, MO, USA). LCMS-grade ammonium hydroxide, water, and methanol were obtained from EMD Millipore Corporation (Billerica, MA, USA).
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4

Carbapenems Absorbance Spectroscopy

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The absorbance of carbapenems, including imipenem (Wako Pure Chemical Industries, Osaka, Japan), meropenem (Tokyo Chemical Industry, Tokyo, Japan), doripenem, biapenem, and ertapenem (Merck, Kenilworth, NJ, USA), was measured using a Corona plate reader SH-9000 (Hitachi, Tokyo, Japan) at room temperature (approximately 25 °C) in a UV-transparent 96-well plate (Zell-kontakt, Nörten-Hardenberg, Germany). Measurements with bandwidths of 1 nm and 5 nm were implemented for analysing absorption spectra.
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5

Antimicrobial Agents Acquisition Protocol

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Most antimicrobial agent standard powder including imipenem and cilastatin sodium, meropenem, ciprofloxacin, ceftazidime, sulbactam, colistin sulphate were purchased from Tokyo Chemical Industry, Japan. Biapenem and fosfomycin standard powder were supported by Thai Meiji Pharmaceutical Co., Ltd, Thailand.
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6

Meropenem Antibiotic Resistance Assay

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Meropenem was purchased from TCI Chemicals (Shanghai, China). Kanamycin sulfate and Luria–Bertani (LB) broth powder were purchased from Affymetrix. Auranofin (AUR) was purchased from MedChemExpress (MCE, USA). The fluorescent substrate NBD-glycerol-3-PEA was purchased from Avanti Lipids, USA. TLC plate (Silica gel 60 F254, Aluminium sheets, 20 × 20 cm) was purchased from Merck, Germany. All the other chemicals were purchased from Sigma-Aldrich unless otherwise stated. All the sources of bacteria employed for cell-based and animal studies are listed in Supplementary Table 7. All the specific primers for different genes listed in Supplementary Table 8 were synthesized by BGI Gene Company (Shenzhen, China).
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7

Meropenem and Kanamycin Antimicrobial Assay

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Meropenem was purchased from TCI Chemicals (Shanghai). Kanamycin sulfate, Luria-Bertani (LB) Broth Powder, and LB agar were purchased from Affymetrix. All other chemicals were purchased from Sigma-Aldrich unless otherwise stated.
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8

Antibiotic Susceptibility Testing Protocol

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Pathogens used in this study were acquired from the German Collection of Microorganisms and Cell Cultures (Deutsche Sammlung von Mikroorganismen und Zellkulturen, DSMZ) or the American Type Culture Collection (ATCC) or were part of our internal strain collection. They were handled according to standard procedures. Ciprofloxacin was purchased from Sigma (#17850-25G-F), and Meropenem was purchased from TCI chemicals (#M2279).
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