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Novex zymogram system

Manufactured by Thermo Fisher Scientific

The Novex Zymogram system is a laboratory instrument used for the analysis of enzymatic activity in protein samples. It provides a method for the separation and visualization of enzymes based on their ability to degrade specific substrates incorporated into a polyacrylamide gel. The system allows for the detection and quantification of enzyme activity, which can be useful in various applications, such as enzyme kinetics studies, identification of proteases, and evaluation of enzyme inhibitors.

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2 protocols using novex zymogram system

1

Protein Expression and Cytokine Profiling

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Immunoblots for Jnk (rabbit polyclonal antibody, Abcam), phospho-Jnk (clone 98F2, Cell Signaling Technology), Stat3 (rabbit polyclonal antibody, Cell Signaling Technology), phospho-Stat3 (clone D3A7, Cell Signaling Technology), and Lox (rabbit polyclonal antibody, Abcam) were performed using the NuPAGE system (ThermoFisher Scientific). Gelatin zymography was performed using the Novex zymogram system (ThermoFisher Scientific) according to the manufacturer's instruction. Serum cytokine concentrations were quantified using a Bio-Plex multiplex bead array system with the mouse cytokine Th17 panel A (#M6000007NY, Bio-Rad).
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2

Multiplex Cytokine Profiling and Signaling Analysis

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We measured the profiles of 52 cytokines (Table 2) that were secreted into the conditioned media using fluorescent beads-based multiplex assay (Bio-Plex, Bio-Rad, Hercules, CA, USA), using human cytokine 27-plex (#M500KCAF0Y, Bio-Rad), cytokine 21-plex (#MF0005KMII, Bio-Rad), VCAM-1 (#171B6022M, Bio-Rad), ICAM-1 (#171B6009M, Bio-Rad), and human TGF-β 3-plex (#171W4001M, Bio-Rad) assays according to the manufacturer’s protocol. Cytokine secretion was normalized for the wet weight of tissue as measured by the end of culture. The effect of pyridone 6 or IL-6 on cytokine secretion was estimated by calculating the ratio of cytokine secretion in the presence and absence of pyridone 6 or IL-6 (POST) to the basal cytokine secretion (PRE) (Fig. 1). Immunoblotting was performed for phosphorylated STAT3 (Tyr705, #9145, Cell Signaling Technology, Danvers, MA, USA), total STAT3 (#4904, Cell Signaling Technology), and GAPDH (#MAB374, Millipore), which served as the internal reference. Gelatin zymography was performed using the Novex zymogram system (#EC6175BOX, Thermo Fisher Scientific) according to the manufacturer’s instruction.
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