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Fusion fx device

Manufactured by Vilber
Sourced in Germany

The Fusion FX device is a piece of laboratory equipment designed for performing gel documentation and analysis. It provides illumination and imaging capabilities to capture and process images of various types of gels, such as agarose or polyacrylamide gels. The device features a high-resolution camera and various illumination options, including ultraviolet (UV) and white light sources, to enable the visualization and documentation of DNA, RNA, or protein samples separated by electrophoresis.

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7 protocols using fusion fx device

1

Protein Extraction and Immunodetection from Cell Lysates

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To extract protein from whole cell lysate, a radioimmunoprecipitation assay buffer (30 mM Tris, 0.5 mM EDTA, 150 mM NaCl, 1% NP-40, 0.1% SDS) supplemented with 10% protease and phosphatase inhibitors (Roche, Switzerland) was used. Protein concentration was measured using a bicinchoninic acid kit (Thermo Fisher, USA). To separate proteins via gel electrophoresis, 20 µg of whole cell protein was applied per lane of a 10% polyacrylamide gel and subsequently transferred to a nitrocellulose membrane. After incubation with primary and secondary antibodies (concentrations provided in Table 2), immunodetection was performed with a Fusion FX device (Vilber Lourmat Deutschland GmbH, Germany).
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2

Western Blot Protein Extraction Protocol

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For protein extraction, 12.5 × 104 cells per well were seeded onto 6-well plates and harvested after 72 h. Therefore, cells were washed once with cold PBS, and 56 µL of radioimmunoprecipitation assay buffer (30 mM Tris, 0.5 mM EDTA, 150 mM NaCl, 1% NP-40, 0.1% SDS) supplemented with 10% protease and phosphatase inhibitors (Hoffmann-La Roche, Basel, Switzerland) was added directly to each well and cells were scraped off. Protein concentration was determined with a bicinchoninic acid kit (Thermo Fisher Scientific, Waltham, MA USA). Western blots were performed as described previously [8 (link),20 (link)]. 10 µg of whole cell protein was separated on a 10% polyacrylamide gel and subsequently transferred to a nitrocellulose membrane. Immuno-detection was performed with a Fusion FX device (Vilber Lourmat Deutschland GmbH, Eberhardzell, Germany). Table 2 summarizes all antibodies and respective concentrations used in this study.
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3

Western Blot Analysis of VCAM-1 in fetal Placental Endothelial Cells

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The total protein amount of VCAM-1 from 10 different CTR fpECAs was determined by WB assay. Dilution of primary antibody was 1:1000, while for secondary antibody, it was 1:2000. Total protein (10 µg) was separated by electrophoresis and then blotted on a nitrocellulose membrane. After 1 h blocking with 5% milk, the membrane was incubated with VCAM-1 primary antibodies (#13662, Cell Signaling Technology, Denver, MA, USA) at 4 °C overnight. Followed by 1 h washing with Triss Borat EDTE buffer with 0.1% Tween, the membrane was exposed to HRP-bonded secondary antibody for 1 h at room temperature. After another hour of washing and 5 min enhancement with SuperSignal West Pico (Bio-rad, Hercules, CA, USA), bands were visualized on Fusion FX device (Vilber, Collégien, France). As a loading control, vinculin (ab129002, Abcam, Cambridge, UK) was used. Quantification of bands was performed on Evolution Capture v17 (Fusion Software, Vilber, Collégien, France).
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4

Macrophage Signaling Pathway Analysis

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M-CSF differentiated macrophages were starved for 4h in medium then stimulated with hIgG1 or αChemR23 (10µg/ml) for different times. Cells were lysed with 200µl of RIPA (Sigma-Aldrich) buffer 1X supplemented with protease inhibitor cocktail (Fast protease inhibitor, Sigma-Aldrich) and phosphatase inhibitors (Phos STOP, Roche). Cell lysates were centrifuged for 25min at 800g at 4°C to remove debris and the supernatants were stored at -80°C. Proteins were quantified using Bradford assay (Interchim). 7µg of proteins were loaded in 4-20% Mini-PROTEAN® TGX™ Precast Protein Gel (#4561093, Biorad) and then transferred onto a nitrocellulose membrane. After 2h of saturation in 5% milk/TBS-Tween 0,05%, the membranes were incubated with primary antibodies anti–phospho(Thr202/Tyr204) - ERK1/2 (p44/42 MAPK) (#4370, Cell Signaling) (1:1000), anti- ERK1/2 (p44/42 MAPK) (#9102S, Cell Signaling) or anti–phospho(Ser473) -AKT (#4051S, Cell Signaling) (1:1000), anti-AKT (#4691S, Cell Signaling) or anti-Actin M(AB1501 Millipore) for 1h at room temperature. Proteins were incubated with Goat anti-Rabbit (#111-001-003) or Goat anti-Mouse (115-035-008) secondary antibodies (Jackson ImmunoResearch) for 1h at room temperature and then revealed with the Immobile Western Chemiluminescent HRP Substrate (WBKLS0500, EMD Millipore). The data were analyzed with the Fusion FX device (Vilber).
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5

Protein Extraction and Western Blot Analysis

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Protein was extracted from whole-cell lysates using radioimmunoprecipitation assay buffer (30 mM Tris, 0.5 mM EDTA, 150 mM NaCl, 1% NP-40, 0.1% SDS) supplemented with 10% protease and phosphatase inhibitors (Roche, Switzerland). To ascertain protein concentration, a bicinchoninic acid kit (Thermo Fischer, USA) was used. Western blots were performed as described previously (El-Armouche et al. 2008 (link)). A 20 μg of a whole-cell protein was separated on a 10% polyacrylamide gel and then transferred to a nitrocellulose membrane. Immunodetection was performed with a Fusion FX device (Vilber Lourmat Deutschland GmbH, Germany). Table 1 provides a list of antibodies and respective concentrations used in this study.
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6

Western Blot Protein Detection

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Cell lysis, SDS-PAGE, and immunoblotting were performed using standard procedures. A measure of 40 μg of proteins were loaded per lane for Western blot and samples underwent electrophoresis through an 8% polyacrylamide gel at 125 mV for 1 h 30. Primary antibodies used for Western blotting are listed in Table S2. Secondary antibodies were HRP-conjugated goat anti-mouse (GE healthcare, Chicago, Il, USA) and goat anti-rabbit (Dako-Agilent, Santa Clara, CA, USA) antibodies. Protein signals were revealed by SuperSignal West Pico and Femto Chemiluminescent Substrate (Thermo Scientific, Waltham, MA, USA) and captured with the Fusion FX device (Vilber Lourmat, Marne-la-Vallée, France).
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7

Recombinant Nanobodies for VacA/VacB

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Recombinant nanobodies with the Fc portion of rabbit IgG, which recognize specifically VacA or VacB were previously characterized (Bosmani et al., 2020) . The other following antibodies were used: pan-vacuolin (Dr. M. Maniak (Jenne et al., 1998) ), VatA (Dr. M. Maniak (Jenne et al., 1998) ), p80 (purchased from the Geneva Antibody Facility), cathepsin D (Dr. J. Garin (Journet et al., 1999) ), ubiquitin FK2 (Enzo Life Sciences), and GFP (pAb from MBL Intl., mAb from Abmart). Goat antimouse or anti-rabbit IgG coupled to AlexaFluor 488, AlexaFluor 594, AlexaFluor 647 (Invitrogen) or to HRP (Brunschwig) were used as secondary antibodies.
After SDS-PAGE separation and transfer onto nitrocellulose membranes (Protran), immunodetection was performed as previously described (Schwarz et al., 2000) but with ECL Prime Blocking Reagent (Amersham Biosciences) instead of non-fat dry milk. Detection was performed with ECL Plus (Amersham Biosciences) using a Fusion Fx device (Vilber Lourmat). Quantification of band intensity was performed with ImageJ.
For immunofluorescence, infected D. discoideum cells were fixed with ultra-cold methanol (MeOH) at the indicated time points and immunostained as previously described (Hagedorn et al., 2006) . Images were recorded with a Leica SP8 confocal microscope using a 63×1.4 NA oil immersion objectives.
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