The largest database of trusted experimental protocols

3 protocols using short interfering rnas sirnas

1

Molecular Profiling of Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Phosphate-buffered saline (PBS), Roswell Park Memorial Institute medium (RPMI) 1640, and fetal bovine serum (FBS) purchased from Hyclone (Logan, UT, USA) were used. Rabbit polyclonal antibodies against human HERG1 and TXNDC5 were purchased from Abcam (Cambridge, UK), whereas those against human p21, cyclin D1, E-cadherin, vimentin, fibronectin, Janus N-terminal kinase (JNK)1/2, phosphorylated (p)-JNK1/2, p38, p-p38, phosphoinositide 3-kinase (PI3K), p-PI3K, AKT, p-AKT, Src, p-Src, and glyceraldehyde-3-phosphate dehydrogenase (GAPDH, used as the internal control) were purchased from Cell Signaling Technology (Danvers, MA, USA). Short interfering RNAs (siRNAs) that targeted TXNDC5 were obtained from GenePharma (Shanghai, China). Invitrogen (Carlsbad, CA, USA) was the supplier of TRIzol, Moloney murine leukemia virus reverse transcriptase (M-MLV-RT), and Lipofectamine 2000, whereas Roche (Penzberg, Germany) provided SYBR Green I Master kits. Unless otherwise mentioned, biochemical reagents used were from Sigma (St. Louis, MO, USA).
+ Open protocol
+ Expand
2

Genetic Manipulation of MTX1 and CISD1

Check if the same lab product or an alternative is used in the 5 most similar protocols
Short-interfering RNAs (siRNAs) targeting MTX1 or CISD1 were synthesized by Shanghai Genepharma Co., Ltd, Shanghai, China. The sequences were as follows: siNC: 5′-UUCUCCGAACGUGUCACGU-3′; siMTX1: 5'-CCCACAUUCUCAGUCUCUA-3'; siCISD1-1: 5'-CAGCUGCAAUUGGUUAUCU-3'; siCISD1-2: 5'-CGUGAAGUUACCUGAUUGU-3'.
For gene overexpression, FLAG-tagged MTX1 plasmid was constructed through cloning MTX1 cDNA (GeneBank Accession Number: NM_002455.5) into pcDNA3.1 vector. CISD1 overexpression plasmid (also FLAG tagged) was constructed based on pENTER vector, which was obtained from Vigene Biosciences, Shandong, China. MTX1-overexpressing lentivirus was prepared by Shanghai Genepharma Co., Ltd, Shanghai, China.
+ Open protocol
+ Expand
3

Cell Culture and Transfection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
HL-02 cell lines were obtained from the Chinese Academy of Sciences (Shanghai, China), Bel-7404, SK-Hep1, Bel-7402, SMMC-7721, and HepG2 were obtained from American Type Culture Collection (ATCC, USA), which also used in our previous studies.15 (link),16 (link) Cells were cultured in DMEM (HyClone, USA) with 10% fetal bovine serum and 1% penicillin-streptomycin in a 37°C cell culture incubator with 5% CO2. Short interfering RNAs (siRNAs) were synthesized by GenePharma (Shanghai, China). Lipofectamine 2000 (Invitrogen, USA) was used to transfect the MCM and negative control siRNAs into the cells according to the manufacturer’s suggestions. The specific siRNA primers are listed in Table S1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!