The largest database of trusted experimental protocols

Pis0 vector

Manufactured by Addgene
Sourced in United States

The PIS0 vector is a plasmid vector used for genetic engineering applications. It provides a backbone for inserting and expressing DNA sequences of interest in various cell types. The core function of the PIS0 vector is to serve as a cloning and expression tool for researchers working in molecular biology and related fields.

Automatically generated - may contain errors

4 protocols using pis0 vector

1

3'-UTR Sequence Luciferase Assay for miRNA Targeting

Check if the same lab product or an alternative is used in the 5 most similar protocols
A part of the 3′-UTR sequence of TSC1 (935 bp) including the predicted miRNA recognition element (MRE) was cloned into the pIS0 vector (Addgene) containing the luciferase gene (3′-UTR). RT-PCR was used to amplify the 3′-UTR sequence of TSC1 from mRNA isolated from PASMCs using 5′-ATGGAGCTCTGTGTGGAAATGGGACGGAG-3′ and 5′-ATGGGCCGGCCTGGGAAATGATGGTCA-3′. For the 3′-UTR mt, which is the same 3′-UTR with a mutated MRE sequence, an upstream region and a downstream region of the MRE site in the 3′-UTR construct were amplified using primers including the XhoI enzyme recognition sequences. Two PCR products were digested by XhoI enzyme, ligated to change the MRE sequence into the XhoI recognition sequence and then cloned into the pIS0 vector. 5′-ATGGAGCTCTGTGTGGAAATGGGACGGAG-3′ and 5′-TCACTCGAGCAGGTTCAAAGGACGCAAC-3′ were used for the amplification of the upstream region. 5′-TCACTCGAGATGAGGCCAAATTTAATCTTTG-3′ and 5′-ATGGGCCGGCCTGGGAAATGATGGTCA-3′ were used for the amplification of the downstream region. The predicted MRE sequence (23 bp) and MRE mutant (MRE mt) sequence were cloned into the pIS0 vector (Addgene). 5′-GCGTCCTTTGAACCTGTGCAATACCGG-3′ and 5′-TATTGCACAGGTTCAAAGGACGCAGCT-3′ were used for the MRE and 5′-GCGTCCTTTGAACCTGTCGTTAACCGG-3′ and 5′-TTAACGACAGGTTCAAAGGACGCAGCT-3′ were used for the MRE mt.
+ Open protocol
+ Expand
2

Luciferase Assay of Trb3 3'UTR

Check if the same lab product or an alternative is used in the 5 most similar protocols
The full-length 3’UTR sequence of Trb3 and the predicted MRE sequence were cloned into the pIS0 vector (Addgene) containing the luciferase gene. The full-length 3’UTR sequence of Trb3 was amplified by RT-PCR from mRNAs isolated from PASMCs using 5’- ATGGAGCTCTAGGACCACCCTACTACACG-3’ and 5’- ATCGGCCGGCCCCTTTATTAGGCACAGGTAAA-3’. 5’-AAGGGAGGTATCCCTGTGCCAAA-3’ and 5’- TTTGGCACAGGGATACCTCCCTT-3’ were used for MRE and 5’- AAGGGAGGTATCCCTGTCGGTAA-3’ and 5’- TTACCGACAGGGATACCTCCCTT-3’ were used for the MRE mutant (MRE-mut).
+ Open protocol
+ Expand
3

Lentiviral Transduction of miRNA Precursors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human APP coding sequence (CDS) was directly amplified from the cDNA of 3xTg-AD mice and cloned into the pIS0 vector (Addgene, USA)69 (link), upstream of the luciferase reporter gene. Colonies with the desired insertion were screened by PCR and further validated by sequencing. Lentiviral plasmids encoding the endogenous precursor sequence of each miRNA (precursor [pre-]miRNAs) and the NC (Invitrogen, USA) were generated by amplifying the precursor sequence and inserting the sequence in the linearized pENTR/pSUPER+ (#575-1, Addgene, USA). The H1-miRNA cassette was then transferred, employing the LR clonase recombination system, into a gateway pLenti CMV GFP destination vector (#736-1, Addgene). Lentiviral particles encoding the precursor sequence of pri-miR-31 were produced in HEK293 cells as previously described.70 (link) Lentiviral particles were resuspended in 1% BSA in sterile PBS. The viral particle content of each batch was determined by quantifying the HIV-1 p24 antigen by ELISA (Retro-Tek kit; Gentaur, France), and batches were kept at −80°C until use.
+ Open protocol
+ Expand
4

Characterizing miR-101 Promoter and DOCK4 3'-UTR

Check if the same lab product or an alternative is used in the 5 most similar protocols
To map the miR-101 promoter, five overlapped regions of the putative promoter sequence of miR-101 (~5.2 kb) were cloned into the pGL3-Basic vector containing the luciferase gene (Addgene, Watertown, Massachusetts, USA). PCR was used to amplify the promoter sequence of miR-101 from genomic DNA isolated from PASMCs. Primers used are as follows: Luc #1, 5’-AATCTCGAGCAACACCAGGCACAATCTAATG-3’ and 5’-CACACGCGTAGTCCTCTTTTGCCTGCTCA-3’; Luc #2, 5’-CATCTCGAGGCTAACAACAACAAACCCAGTC-3’ and 5’-CATACGCGTCATTAGATTGTGCCTGGTGTTG-3’; Luc #3, 5’-ATTCTCGAGGGTAGCAGAGTGAGGGAAAGAA-3’ and 5’-CATACGCGTGACTGGGTTTGTTGTTGTTAGC-3’; Luc #4, 5’-ACTCTCGAGCAAGTTCAAATAAGCCTGCAAA-3’ and 5’-ATGACGCGTCTTCTCCCTGCCTTCCTGT-3’; Luc #5, 5’-ATGCTCGAGGTATTTTCTGCTCCACTTCCAA-3’ and 5’-ATGACGCGTTTGCAGGCTTATTTGAACTTG-3’.
For luciferase assay of the 3’-UTR of DOCK4, the 3’-UTR sequence of DOCK4 (1215bp) was cloned into the pIS0 vector containing the luciferase gene (Addgene). RT-PCR was used to amplify the 3’-UTR sequence of DOCK4 from cDNA isolated from PASMCs using 5’-ATGGAGCTCGTCACTTTTCTATGTACCTGCG-3’ and 5’-CTCGGCCGGCCATTTACCATTCAGCAGCAAC-3’ [21 (link)].
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!