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85 protocols using ab33168

1

Western Blot and Immunofluorescence Antibodies for Endothelial Cell Analysis

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Antibodies against ANGPTL4 (ab196746; also used for immunofluorescence at a 1/100 dilution), VE-cadherin (ab33168), and GAPDH (ab8245) for western blotting were obtained from Abcam (Cambridge, UK) and used at a 1/1000 dilution; antibodies against slug (9585), snail (3879), VEGFR2 (9698; also used for immunoprecipitation), phospho-Src Y416 (2101), Src (2109) and phospho-VEGFR2 Y949 (2471; human Y951, corresponding to mouse Y949) for western blotting were purchased from Cell Signaling Technology (Danvers, MA, USA) and used at a 1/1000 dilution. Antibodies against CD31 (ab28364) and VE-cadherin (ab33168) for immunofluorescence were purchased from Abcam and used at a 1/100 dilution. Antibodies against SV40 large T antigen (15,729) for immunofluorescence were acquired from Cell Signaling Technology and used at a 1/100 dilution.
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2

VE-Cadherin Immunofluorescence Staining

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The immunofluorescence was performed by staining with a rabbit polyclonal antibody against human/mouse VE‐Cadherin (1:200; ab33168, Abcam) and a Goat Anti‐Rabbit IgG H&L (Alexa Fluor 488) (1:200; ab150077, Abcam) as previously described.27 Then cells were mounted with ProLong® Gold antifade Reagent with DAPI (Life Technologies). Images were captured using Leica SP5 Laser scanning confocal microscope.
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Protein Expression Analysis in Heart Tissues and Cells

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We extracted proteins from heart tissues and cultured cells using lysis buffer and centrifuged at 10 400 g for 10 minutes at 4°C. Protein concentrations were quantified by the BCA method (PC0020; Solarbio Life Sciences). Next, 80 μg samples were added on the gel for SDS‐PAGE and then transferred to PVDF membranes. After blocking with 5% non‐fat milk for 1 hour at room temperature, membranes were incubated with primary antibodies overnight at 4°C and then with horseradish‐conjugated secondary antibodies. The protein expression was quantified by the Bio‐Rad Gel Image Analysis System (Bio‐Rad) and Image‐Pro Plus (Media Cybernetics, Inc). The total protein levels were normalized to GAPDH. The primary antibodies used were as follows: anti‐CD31, ab28364; anti‐VE‐cadherin, ab33168; anti‐α‐SMA, ab5694; anti‐Vimentin, ab92547, all from Abcam, 1:500; anti‐EP4, 24985‐1‐AP, Proteintech, 1:500; and rabbit anti‐GAPDH.
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Immunofluorescence Staining of Cardiac Tissue

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Deparaffinizing, antigen retrieval, and blocking of non-specific background were performed as described previously 22 (link) and sections were incubated with primary antibodies overnight at 4°C. After washing three times with PBS, and incubated with fluorescence-labeled secondary antibodies for 1 hour at room temperature in the dark. Slices were washed three times in PBS, and then counterstained with DAPI (Sigma-Aldrich, St Louis, MO, USA). The primary antibodies were as follows: anti-sarcomeric alpha actinin (1:200; ab9465, Abcam, UK), anti-phosphorylated Histone 3 (1:1000; 3377, Millipore, USA), anti-Ki67 (1:200; ab16667, Abcam, UK), anti-Aurkb (1:100; A5102, Sigma, USA), anti-CDH5 (1:100; ab33168, Abcam, UK) and anti-Vimentin (1:100; ab92547, Abcam, UK). The secondary antibodies were from Invitrogen: anti-rabbit Alexa Fluor 488-conjugated (1:400; A21206, Invitrogen, USA), anti-mouse Alexa Fluor 594-conjugated (1:400; A21203, Invitrogen, USA). Fluorescence was observed under a ZEISS LSM800 confocal laser scanning microscope (Carl Zeiss, Inc., Jena, Germany). We used High Content Screening System (Opera Phenix) to count cell proliferation ratio.
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5

Immunofluorescent Staining of Cardiac Tissue

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For heart tissue staining, frozen myocardial tissue was horizontally sliced into 5 μm section and mounted on glass slide. Both sections and cells were fixed in 4% paraformaldehyde for 15 min, permeabilized with Triton X-100 (0.1%) and blocked with solution containing 5% bovine serum before applying primary antibody. Specimens were incubated with anti-α-smooth muscle actin (α-SMA) (Abcam, catalog #ab5694; 1:100), anti-fibroblast- specific factor 1 (FSP1) (Abcam, catalog #S100A4; 1:200), anti-VE-cadherin (Abcam, catalog #ab33168; 1:300), anti-CD31(Abcam, catalog #ab24590; 1:200) and anti-β-catenin (Abcam, catalog #ab32572; 1:200) overnight at 4 °C, washed three times in PBS and incubated with the secondary antibody (Life Technologies, catalog #A21207; 1:200) under light-protected conditions for one hour at room temperature and counterstained using 4,6-diamino-2-phenyl indole (DAPI) (KeyGen Biotech, catalog #KGA215–10). Cardiovascular endothelial cells were identified by staining with the lectin BS1-B4 (Sigma, catalog #L-2895) under light-protected conditions at room temperature for 3 hours at and the cover slips were mounted on slides using 50% glycerin. Then, the sections and cells were observed under a fluorescence microscope (Olympus, Tokyo, Japan) or confocal laser scanning microscope (Olympus, Tokyo, Japan).
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Visualization of NET-induced Endothelial Activation

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HUVECs were incubated with cell-free NETs or PBS in 24-well plates for 4 h when the cells grew to a confluent monolayer. The cells were fixed in 4% paraformaldehyde for 15 min at RT, washed three times using 1 × PBS, and blocked for 1 h using 10% goat serum with 1% BSA solution in PBS. For detection of tissue factor (TF) expression, ECs were incubated overnight at 4 °C with rabbit anti-TF (1:500, ab228968; Abcam) and mouse anti-CD31 (1:500, ab9498; Abcam) primary antibodies. The cells were washed with PBS and reincubated for 1 h at RT with Alexa Fluor 594-conjugated (Proteintech) goat anti-rabbit and Alexa Fluor 488-conjugated (Proteintech) goat anti-mouse secondary antibodies. For detection of intercellular junctions of cells, cells were incubated overnight at 4°C with rabbit anti-VE-cadherin (1:500, ab33168; Abcam) primary antibody, followed by Alexa Fluor 488-conjugated (Proteintech) goat anti-rabbit secondary antibody, and were further incubated with Alexa Fluor 594-conjugated phalloidin primary antibody (1:300; Thermo Fisher, Waltham, MA, USA). They were stained with DAPI and fixed with mounting medium (Solarbio) for 5 min at RT in the dark. The cells were observed and photographed using a confocal microscope. The photos were analyzed with ImageJ software.
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7

Immunofluorescence imaging of endothelial cells

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Cells cultured in the FEPM devices were fixed with 4% paraformaldehyde (PFA, Nacalai Tesque, Kyoto, Japan) for 20 min, washed with PBS, and permeabilized with 0.1% Triton X-100 (Sigma-Aldrich, St. Louis, USA) for 15 min. The cells were then incubated with blocking buffer containing 1% bovine serum albumin (BSA, Sigma-Aldrich) for 30 min at room temperature and incubated with antibodies directed against vascular endothelial (VE)-cadherin (Abcam, ab33168, dilution 1:200, Cambridge, UK) or Claudin (Abcam, ab15098, dilution 1:200) overnight at 4 °C, followed by PBS washes. Subsequently, Alexa 568-conjugated secondary antibody (Abcam, ab175471, dilution 1:500) was introduced into the channels and incubated for 1 h at room temperature. The cells were co-stained with 4’,6-diamidino-2-phenylindole (DAPI, Invitrogen, D1306, Waltham, USA). Cross-sectional images were obtained at 2 µm intervals in the vertical direction using a confocal microscopy (FluoView FV1000 confocal, Olympus, Tokyo, Japan) with the 10× objective.
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8

Protein Expression Analysis in Zebrafish

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Total proteins were extracted from zebrafish larvae or cell lysates with a RIPA lysis kit (C1053; Applygen Technologies Inc., Beijing, China), separated using 12% SDS-PAGE, and transferred to a nitrocellulose membranes (T41524; PALL, Mexico), which were blocked with 5% milk in Tris-buffered saline for 1 h at room temperature and then incubated with primary antibodies anti-LOX-1 (ab60178, Abcam), anti-VE-cadherin (ab33168, Abcam), anti-N-cadherin (13A9, mAb #14215, CST), anti-α-SMA (ab7817, Abcam), anti-LC3B (M186-3, MBL), anti-p62 (PM045, MBL), anti-LAMP2 (sc-18822, Santa Cruz), or anti-β-actin (HC201-01, ZSGB-BIO Co) overnight at 4 ºC. After washing, the blots were incubated with goat anti-mouse or goat anti-rabbit immunoglobulin G (ZSGB-BIO) for 1 h and protein bands were visualized by an immobilon western chemiluminescent horseradish peroxidase substrate (Millipore, Billerica). The western blot images are representatives of 4-6 independent experiments with corresponding histograms.
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9

Western Blot Analysis of EMT Markers

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Cells (please see below) were lysed by using lysis buffer for western blotting (P00l3, Beyotime) and loaded onto 10% sodium dodecyl sulphate-polyacrylamide gels and were then transferred onto polyvinylidene difluoride membranes (Millipore). The quantification of total protein was performed using a Pierce BCA Protein Assay kit (Thermo Fisher Scientific), and equal amounts of protein (30 μg) were used for analysis. Blots were blocked with 5% milk/TBST and incubated with primary antibodies (Twist1: 1:500, sc-15393, Santa Cruz Biotechnology; Slug: 1:1,000, 6591, Cell Signaling Technology; Snail: 1:1,000, ab53519, Abcam; Vimentin: 1:1,000, 2707-1, Epitomis; EphA2: 1:500, sc-924, Santa Cruz Biotechnology; VE-cadherin: 1:500, ab33168, Abcam; MMP2: 1:500, ab37150, Abcam; E-cadherin: 1:200, SC-8426, Santa Cruz Biotechnology; p-smad2/3: 1:500, sc-11769, Santa Cruz Biotechnology) at 4°C overnight, followed by incubation with secondary antibodies (goat anti-mouse IgG-HRP and goat anti-rabbit IgG-HRP, 1:2,000; sc-2005 and sc-2030; Santa Cruz Biotechnology) for 2 h at room temperature. Blots were developed using an enhanced chemiluminescence detection kit (Amersham Pharmacia Biotech). For protein loading analyses, p-actin antibody (1:1,000, P30002, Abmart) or GAPDH (1:2,000, ab9485, Abcam) was used.
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10

Immunofluorescence Assay for S1PR1, VE-cadherin, and β-catenin

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The cells were tiled on coverslips, incubated at 37 °C overnight, permeabilized with 0.1% Triton X-100 and blocked with 5% FBS. Then, the cells were incubated with primary antibodies against S1PR1 (ab11424; Abcam; 1:50), VE-cadherin (ab33168; Abcam; 1:50), and β-catenin (ab32572; Abcam; 1:100). After incubation with fluorophore-conjugated secondary antibodies, the nuclei were counterstained with 4',6-diamidino-2-phenylindole(DAPI) (Sigma). Images were acquired by fluorescence microscopy (Nikon, Japan).
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