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15 protocols using pe mouse anti human hla dr

1

Phenotypic Characterization of Dendritic Cells

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PBMCs were stained with fluorescent dye conjugated to antibodies. For pDCs, BD Horizon Fixable Viability Stain 780 (FVS780) viability dye, PE-Cy7 Mouse Anti-Human CD123 (BD, 560826), BB515 Mouse Anti-Human Neuropilin-1 (CD304) (BD, 566036), APC Mouse Anti-Human CD86 (BD, 555660), and PE Mouse Anti-Human HLA-DR (BD, 556644) were used. For mDCs, FVS780, Anti-human Lineage Cocktail 1 (Lin1) (CD3, CD14, CD16, CD19, CD20, CD56) (BD, 340546), PE-Cy™7 Mouse Anti-Human CD11c (BD, 561356), APC Mouse Anti-Human CD86 (BD, 555660), and PE Mouse Anti-Human HLA-DR (BD, 556644) were used. After staining, both cell lines were fixed with BD Cytofix Fixation Buffer (BD Bioscience). CD123+CD304+ cells were defined as pDCs, and Lin1 CD11c+ cells were identified as mDCs. The expression levels of HLA-DR and CD86 were used as activation markers of pDCs and mDCs. After staining, the cells were analyzed by flow cytometry using CytoFLEX (Beckman Coulter, Brea, CA, USA), and the data were analyzed using FlowJo 10.9.0 software (Treestar, ON, USA).
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2

Characterization of Cardiac Mesenchymal Cells

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Cardiac cells were detached from tissue culture plastic using TrypLE Express and resuspended in flow cytometry (FACS) buffer to a cell density of 1 × 106 cells/mL. Aliquots of 200 μL were transferred to 1.5 mL microfuge tubes and incubated at 4°C for 1 h with 5 μg/mL of primary antibody (CD44, CD90, CD105, CD106, CD146, CD166, CD19, CD45, or IgG isotype control). Primary antibodies and IgG control were taken from the Human Multipotent Mesenchymal Stromal Cell Marker Antibody Panel kit (R&D Systems). Cells were rinsed with phosphate buffered saline and then resuspended in FACS buffer with donkey anti-mouse secondary antibody conjugated to Alexa Flour® 488 diluted 1:250 (Invitrogen). Cells were labeled with directly conjugated primary antibodies raised against MHC class I and MHC class II antigens (HLA-ABC-FITC, 5 μL of stock reagent in 200 μL of cell suspension, Beckman Coulter; PE mouse antihuman HLA-DR, 5 μL of stock reagent in 200 μL of cell suspension, BD) and c-kit (5 μg/mL of PE-conjugated primary antibody; BD). Controls where unstained CDC and CMSCLC from the same cell preparations. Analysis was done using FACSCanto II (BD) with a 488 laser and 530/30 emission filter, and data analysis collated using FACS DiVa software.
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3

Characterizing Sperm HLA Expression

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Untreated and probiotic treated spermatozoa were stained with phycoerythrin (PE) mouse anti-human HLA-ABC (BD pharmingen, USA) and PE-mouse anti-human HLA-DR (BD pharmingen, USA) in distinct tubes. The density of cells was 1 × 106 spermatozoa. After incubation at room temperature for 30 min and two washes with AllGrad Wash (400g for 5 min), spermatozoa were run through the flow cytometer (BD FACS Calibur, USA). Data from at least 100,000 events were collected using forward scatter and side angle of light scatter (a logarithmic amplifier). Fluorescence data were obtained with the logarithmic amplifier. The data were analysed using the FlowJo vx10 software.
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4

Phenotypic Analysis of Immune Cell Subsets

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Collected MSCs were incubated for 30 min at room temperature with the following specific antibodies: PE mouse anti-human CD29, FITC rat anti-human CD44, FITC mouse anti-human CD105, FITC rat anti-human CD45, APC mouse anti-human CD34, and PE mouse anti-human HLA-DR (all from BD Pharmingen). As a control, the cells were stained with the appropriate isotype antibodies. At the end of co-culture, the CD4+ T cell apoptosis was analyzed by using an Annexin V-PE Apoptosis Detection Kit I (BD Biosciences) according to the manufacturer’s instructions. To detect Treg cells, a Human Regulatory T Cell Staining Kit (eBioscience) containing an anti-CD4-FITC/CD25-APC cocktail and anti-Foxp3-PE was used according to the manufacturer’s instruction. In addition, we used a Human Th1/Th2/Th17 Phenotyping kit (BD Pharmingen) to analyze the T helper cell subsets. All samples were analyzed using a BD Biosciences Influx cell sorter.
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5

HLA Expression on Human Spermatozoa

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The presence of HLA class I and II on the surface of spermatozoa was assessed by direct immunofluorescence using a BD FACSCalibur (BD Biosciences, USA) flow cytometer. Two tubes for each sample containing 1 × 106 spermatozoa were prepared. One was incubated with phycoerythrin (PE) mouse anti‐human HLA‐ABC (clone: G46‐2.6, BD pharmingen, USA) and the other was incubated with phycoerythrin (PE) mouse anti‐human HLA‐DR (clone: G46‐6, BD pharmingen, USA) at room temperature for 30 min. After two washes with AllGrad Wash (400 g for 5 min), tubes were run through the flow cytometer. Data from at least 100,000 events were collected using forward scatter (a logarithmic amplifier) and side angle of light scatter (a logarithmic amplifier). As a negative control, we used unstained control. Isotype controls [Mouse IgG1, κ (clone: G46‐2.6, BD pharmingen, USA) and Mouse IgG2a, κ (clone: G46‐6, BD pharmingen, USA)] were used to determine background fluorescence (autofluorescence and non‐specific binding of antibodies). To remove background fluorescence, antibody titration was done and the optimal titer that showed minimum background was selected. Noteworthy, cell viability test was not performed because we removed abnormal and dead spermatozoa by AllGrad solution before staining. Fluorescence data were obtained with the logarithmic amplifier. We used flowJo vx software for data analyses.
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6

Characterization of Mesenchymal Stem Cells

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H9‐derived MSCs and human bone marrow‐derived MSCs (Lonza, Walkersville, MD,
http://www.lonza.com) were grown to confluence, harvested by using 0.25% trypsin/EDTA, and resuspended in buffer containing phosphate‐buffered saline (PBS), 2% HEPES buffer, 2% FBS, and 0.1% bovine serum albumin (BSA) as previously described 43. Cells (1 × 106) were incubated with phycoerythrin (PE) mouse anti‐human CD90, PE mouse anti‐human CD73, fluorescein isothiocyanate (FITC) mouse anti‐human CD44, FITC mouse anti‐human CD45, FITC mouse anti‐human HLA‐ABC, PE mouse anti‐human CD29, PE mouse anti‐human CD166, PE mouse anti‐human HLA‐DR, FITC mouse anti‐human CD105, or FITC mouse anti‐human CD31 (BD Biosciences, San Jose, CA,
http://www.bdbiosciences.com). Nonspecific fluorescence was determined by using isotype‐matched monoclonal antibodies. A total of 10,000 events were collected on a BD fluorescence‐activated cell sorting Calibur Flow Cytometer instrument by using CellQuest software (BD Biosciences). Analyses of results and corresponding graphs were generated by using FlowJo software (Tree Star, Ashland, OR,
http://www.flowjo.com) 434445.
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7

Isolation and Characterization of Deciduous Dental Pulp Cells

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Dental pulp tissues were isolated from extracted deciduous incisors (6–8-year-old donors). Parents of these donors signed written informed consent forms. Pulp tissues were isolated, washed, digested in 3 mg/ml collagenase type I (Sigma-Aldrich, United States) for 2 h and incubated with culture medium at 37°C in 5% CO2. At 80% confluence, the cells were trypsinized and subcultured. The specific cell surface molecules were identified using flow cytometry. Briefly, cells at passage three were trypsinized and incubated with FITC mouse anti-human CD105 (Cat.561443), PE mouse anti-human CD34 (Cat.555822), PE mouse anti-human CD90 (Cat.555596), PE mouse anti-human HLA-DR (Cat. 555812) and BV510 mouse anti-human CD45(Cat.563204) (all from BD Biosciences, United States) on ice for 30 min. Then the cells were washed, resuspended and detected with a flow cytometry system (BD LSRFortessa, BD Biosciences, Franklin Lakes, NJ, United States).
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8

Mesenchymal Stem Cell Characterization

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MSCs were detached and incubated for 30 min at room temperature with the following specific antibodies: PE mouse anti-human CD90 (immunoglobulin G [IgG], k, clone: 5E10), FITC mouse anti-human CD73 (IgG1, k; clone: MAR4), PE rat anti-human CD14 (IgG2b, k; clone: G44-26), PE mouse anti-human CD105 (IgG1, k; clone: 266), APC rat anti-human CD45 (IgG2b, k; clone: 30-F11), PE mouse anti-human CD34 (IgG1, k; clone: 563) and PE mouse anti-human HLA-DR (IgG2a, k; clone: G46-6; all from BD Biosciences, San Jose, CA, http://www.bdbiosciences.com). Finally, the cells were assayed using a BD Influx Cell Sorter (BD Biosciences). For the cell cycle analysis, MSCs were trypsinized and fixed with 80% cold alcohol at 4°C for 12 h. After centrifugation, MSCs were resuspended in 50 μL of RNase and 450 μL of propidium iodide (PI; Sigma-Aldrich) staining solution, and the phases of the cell cycle in each sample after 30 min of incubation were analyzed by flow cytometry.
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9

Phenotypic Characterization of Activated pDCs

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Referencing a previous in vitro study [10 (link)], PBMCs were stained with a fluorescent dye and fluorescent conjugated antibodies: BD Horizon Fixable Viability Stain 780 (FVS780) viability dye, PE-Cy7 Mouse Anti-Human CD123 (BD, 560826), BB515 Mouse Anti-Human Neuropilin-1 (CD304) (BD, 566036), and APC Mouse Anti-Human CD86 (BD, 555660) following the manufacturer’s instructions, and then fixed with 4% paraformaldehyde. PBMCs were cultured at 1 × 106 cells/mL in RPMI-1640 (Sigma-Aldrich, St. Louis, MO, USA) supplemented with 5% human AB serum (Sigma-Aldrich), 2 mM Glutamax (Thermo Fisher Scientific, Waltham, MA, USA), and 1% penicillin/streptomycin (Thermo Fisher Scientific), and stimulated in the presence of 10 µg/mL TLR-7/8 agonist R848 (InvivoGen, San Diego, CA, USA) for 4 h. Afterward, the cells were harvested and stained with FVS780, PE-Cy7 Mouse Anti-Human CD123, BB515 Mouse Anti-Human Neuropilin-1 (CD304), and PE Mouse Anti-Human HLA-DR (BD, 556644) as described above. Data were collected using CytoFLEX (Beckman Coulter, Brea, CA, USA) and analyzed using the FlowJo version 10 software (BD). Isotype controls (BD) were used to check the background caused by nonspecific antibody binding. pDCs were defined as CD123+CD304+ subsets, and CD86 and HLA-DR were used as activation markers for pDCs.
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10

Flow Cytometry Immunophenotyping of Cells

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Cells were digested by trypsinization, then harvested by centrifugation at 1500 rpm for 5 min, washed in ice-cold phosphate-buffered saline (PBS), and finally resuspended at a ratio of 105 cells/antibody. Cells were then incubated for 30 min. on ice in the dark with the appropriate isotype controls or the preconjugated antibodies. Next, cells were washed and resuspended in PBS (500 μL) and then analyzed in the Becton Dickinson FACSCalibur flow cytometer (BD Biosciences, San Jose, CA) following the method described by Elsafadi et al. (40). The following antibodies were used: APC Mouse Anti-Human CD44, FITC-PE-APC-mouse-IgG1k-isotype-control, FITC Mouse Anti-Human CD45, FITC Mouse Anti-Human CD31, PE-mouse-anti-human-CD73, PE Mouse Anti-Human CD29, and PE Mouse Anti-human HL-ADR (all available from BD Biosciences).
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