The largest database of trusted experimental protocols

37 protocols using cl8942ap

1

Cell-Specific TLR7 Expression in Atherosclerosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell type (macrophage, SMC, and EC)-specific expression of TLR7 in mouse atherosclerotic lesions was determined by immunofluorescent double staining using rabbit anti-mouse TLR7 monoclonal antibody (1:100, ab45371, Abcam) together with rat anti-mouse Mac-2 monoclonal antibody (macrophages, 1:100, CL8942AP, CEDARLANE, Burlington, NC), purified rat anti-mouse CD31 monoclonal antibody (EC, 1:900, #553370, BD Biosciences), and FITC-conjugated mouse anti-α-smooth muscle actin monoclonal antibody (SMC, 1:500, F3777, Sigma-Aldrich). Mouse aortic arch lesion macrophage and SMC apoptosis was also detected by immunofluorescent double staining with Alexa Fluor® 594-conjugate cleaved caspase-3 (Asp175) (D3E9) rabbit monoclonal antibody (1:200, #8172, Cell Signaling Technology, Danvers, MA) together with rat anti-mouse Mac-2 monoclonal antibody or FITC-conjugated mouse anti-α-smooth muscle actin monoclonal antibody as mentioned above. Images were collected under an Olympus FluoView™ FV1000 Confocal Microscope.
+ Open protocol
+ Expand
2

Colon Tissue Immunohistochemistry Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin-embedded colon tissue were sectioned at 5 μm, deparaffinized and permeabilized with Triton X-100 (Sigma-Aldrich) and heat antigen retrieved with Bull’s Eye Decloaker (Biocare Medical). Slides were then blocked for endogenous peroxidase with Bloxall blocking solution (Vector Lab) followed by blocking with either 3% bovine serum albumin, or mouse on mouse blocking reagent (Vector Lab). Anti-IL11 (ab10558; PA5-36544, Invitrogen), anti-CD45 (1:100; ab10558, Abcam), anti-LGALS3 (1 μg/ml; CL8942AP, Cedarlane) amd anti-LAMP2 (1 μg/ml; 550292, BD Bioscience) were added and incubated overnight at 4°C. Anti-rabbit (1:100; ab27478, Abcam) and anti-rat IgG (1 μg/ml; sc-2026, Santa Cruz) isotype controls were added as respective negative controls. Slides were incubated with anti-rabbit IgG peroxidase (1:500, A0545, Sigma-Aldrich) and anti-rat IgG peroxidase (MP-7404, Vector Lab) followed by chromogen development with ImmPACT® DAB peroxidase substrate kit (SK-4105, Vector Lab) according to manufacturer’s instructions. Lastly, Gill’s haematoxylin (H-3401, Vector Lab) was added for nuclear counterstain. To control for unspecific binding, primary antibody isotype controls were included and images are presented in S3 Fig.
+ Open protocol
+ Expand
3

Immunohistological Analysis of Adipocyte Size

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunohistology, tissues were fixed with neutral buffered 10% formalin solution, embedded in paraffin, cut into sections, and then deparaffinized. Sections were incubated with anti-Mac-2 (CL8942AP, Cedarlane Labs) for 30 min at room temperature, and counterstained with hematoxylin. Adipocyte size was measured on 5 independent H&E-stained sections per animal. Oil Red O (ORO) staining was performed on OCT-embedded sections. Images were captured by a digital system, and the staining area was measured using computer-assisted image quantification (Image-Pro Plus software, Media Cybernetics).
+ Open protocol
+ Expand
4

Characterizing Smad7 in Infarct Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
In order to systematically characterize the time course of Smad7 expression in infarct macrophages, Smad7 (using an anti-Smad7 antibody by Thermo Fisher Scientific, #42-0400) and GFP staining (using an anti-GFP antibody, Abcam, #ab6662) was performed on the infarcted CSF1REGFP heart at baseline, 24h, 3-day, 7-day and 28-day timepoints (n=5-6/each time point). In order to identify myofibroblasts in the infarct, sections were stained with an anti-α-smooth muscle actin (SMA) antibody (Sigma, #F3777) as previously described41 . Myofibroblasts were identified as spindle-shaped α-SMA-positive cells located outside the vascular media. To determine the number of macrophages in the infarcted and remodeling myocardium, sections from infarcted Smad7 fl/fl and MyS7KO mice were stained with an anti-Mac2 (galectin-3) antibody (Cedarlane, #CL8942AP), as previously described42 (link),43 (link). Quantitative analysis was performed by counting the number of macrophages in 10 fields from 2 different levels for each animal.
+ Open protocol
+ Expand
5

Immunofluorescence Staining of Mouse Heart Sections

Check if the same lab product or an alternative is used in the 5 most similar protocols
Five micron sections of paraffin-embedded mouse hearts were deparaffinised in xylene, rehydrated in alcohol series and immersed in distilled water, followed by high-temperature antigen retrieval in citrate buffer (pH 6) and blocked with 0.5% bovine serum albumin (BSA). For immunofluorescence, the slides were stained with primary antibodies against CCR7 (NB110-55680, Novus Biologicals, Littleton, CO; 1∶100), CD31 (DIA-310, Dianova GmbH, Hamburg, Germany; 1∶100), Fibroblast Marker (sc-73355, Santa Cruz Biotechnology, San Diego, CA; 1∶100), α smooth muscle Actin (ab7817, abcam, Cambridge, UK; 1∶100) or Mac2 (CL8942AP, Cedarlane, Burlington, Canada; 1∶400) for 1 hour at room temperature and counterstained with Alexa Fluor 488 goat anti-rabbit IgG (1∶500), Alexa Fluor 568 goat anti-rat IgG (1∶500), Alexa Fluor 568 goat anti-mouse or Rat on Mouse AP Polymer kit in combination with Warp Red Chromogen kit (Biocare Medical, San Francisco, CA), respectively. The slides were mounted with SlowFade Gold antifade reagent with DAPI (Life Technologies, Carlsbad, CA). Images were taken by a Nikon Eclipse E400 microscope (Tokyo, Japan).
+ Open protocol
+ Expand
6

Multicolor Immunofluorescence Staining Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
After blocking, slides were incubated with the following primary antibodies: CD31 (Abcam ab32457, 1:100), LGALS3 (Cedarlane CL8942AP, 1:500) or their isotype IgG controls. Each slide had at least two sections stained with primary antibody and at least one section used as an IgG control. ACTA2 was conjugated to -FITC (Sigma F3777 clone 1A4 1:500). Secondary antibodies for immunofluorescence were as follows: donkey anti-rabbit 555 (Invitrogen A21206, 1:250) and donkey anti-rat Dylight 650 (Abcam ab102263, 1:250). Nuclear counterstain was performed with DAPI (ThermoFisher Scientific D3571), and slides were mounted with Prolong Gold Antifade (Invitrogen).
+ Open protocol
+ Expand
7

Atherosclerosis Plaque Imaging in Mice

Check if the same lab product or an alternative is used in the 5 most similar protocols
Apoe−/− Myh11 Cre ERT2 R26R-YFP mice fed a Western Diet (Harlan Teklad; TD.88137) for 17 weeks received an injection of Fluoresbrite Polychromic Red 1.0 micron beads (2.5% solids-latex; Polysciences, Inc., #18660). Beads were diluted in sterile PBS (1:4 dilution) and 250 μL of diluted beads were injected retro-orbitally. 24 hours after the injection, blood was collected by tail bleeding and selective uptake of the beads by circulating Ly6Clow monocytes was assessed by flow cytometry (see Flow cytometry section). 5–7 days after the bead injection, we started the anti-IL-1β antibody or IgG control regimen (10 mg/kg) for a duration of 3 weeks as described above. At the end of the antibody treatment, mice were euthanized by asphyxiation. Mice were perfusion fixed with Periodate-Lysine-Paraformaldehyde (PLP). Each BCA was harvested, post-fixed in PLP, and incubated in a gradient of sucrose solutions before being embedded in O.C.T. compound. Serial frozen 10 μm-thick sections were used to perform immunofluorescent staining for LGALS3 (Cedarlane CL8942AP) and DAPI for nuclear staining. Endogenous fluorescent signal of Fluoresbrite Polychromic Red beads was directly detectable.
+ Open protocol
+ Expand
8

Histological Analysis of Fat and Liver

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fat pads and livers were excised and fixed overnight in 10% PBS buffered formalin and were thereafter stored in 50% ethanol. Tissues were sectioned (5um) rehydrated and stained using H+E, or with primary antibodies to PTEN (Abcam 32199; Dilution 1:25) or Mac-2 (CL8942AP; Dilution 1:200, CEDARLANE Laboratories USA Inc.). Slides were mounted using Prolong Gold Antifade reagent with DAPI (Life Technologies).
+ Open protocol
+ Expand
9

Immunohistochemical Analysis of Invasive Breast Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
Patient slices were obtained from the National Disease Research Interchange. All patients were diagnosed with invasive lobular/ductal carcinoma breast, Grade 2. Patients received total mastectomy or simple radical mastectomy with no known presurgical therapy. Samples were analyzed under the approved University of Texas Southwestern Medical Center Institutional Review Board protocol # STU 012017-043 (Endotrophin Upregulation in Tumor Tissues). Mouse tissues were dissected and fixed in 10% formalin overnight. Paraffin processing, embedding, sectioning and hematoxylin/eosin staining and trichrome staining were performed by John Sheldon at UTSW Medical Center. Immunostaining was performed following standard protocols, with the following antibodies: Perilipin (1:1000, #20R-PP004, Fitzgerald), EGFP (1:500, ab13970, Abcam), α-SMA (1:500, eBioscience™, #14-9760-80), CD31 (1:200, Abcam, #ab28364), Mac2 (1:750, CL8942AP, CEDARLANE) and collagen hybridizing peptide (#5276, Advanced BioMatrix). Images were acquired with LSM510 confocal microscope (Zeiss) and analyzed by Image J software.
+ Open protocol
+ Expand
10

Macrophage Immunohistochemistry Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues were fixed for 12–24 h in 10% formalin, embedded in paraffin, and sectioned. Sections were incubated overnight at 4°C with rat anti-Mac2 (CL8942AP; Cedarlane). Biotinylated rabbit anti-rat (E0467; Dako) was used as secondary antibody. The ABC peroxidase kit (Pierce) was used for immunodetection, and sections were counterstained in Mayer’s hematoxylin.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!