The largest database of trusted experimental protocols

3 protocols using sc 6246

1

Protein Expression Analysis in MESCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The MESCs were lysed, homogenized in 1% SDS lysis buffer supplemented with Halt protease inhibitor cocktail (Thermo Scientific) and kept for 10 min at 95°C. Lysates were centrifuged at 1800 x g for 5 min to remove cell debris. Protein content of the lysate was estimated using the Pierce BCA protein assay kit (ThermoFisher Scientific). Equal amounts of protein lysates were separated by SDS-PAGE gel electrophoresis (Bio-Rad) and transferred to Immobilon-P PVDF membrane (Millipore). Non-specific binding was blocked using 5% nonfat dry milk for 1 h at room temperature and then the membrane was incubated with a primary antibody against p21 (Santa Cruz Biotechnology sc-6246, 1:250), p16 (Cell Signaling Technology #80772, 1:1000), p53 (Cell Signaling Technology #2524, 1:1000), H3K27me3 (Cell Signaling Technology #9733, 1:1000) p-AKT or AKT (Cell Signaling Technology #4060, 1:2000 or #4685, 1:1000, respectively) or GAPDH (Proteintech 60004-1-Ig, 1:5000) at 4°C overnight. The next day, membranes were washed with TBS-T and incubated with horseradish peroxidase-conjugated secondary antibody for 1h. Antibody binding was visualized with SuperSignal west pico PLUS chemiluminescent substrate (Thermo Scientific) and images were captured by C-DiGit blot scanner (LI-COR Biosciences). Band intensities were quantified with ImageJ software.
+ Open protocol
+ Expand
2

Western Blot Analysis of Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue was snap-frozen in liquid nitrogen, pulverized, and resuspended in a buffer containing 4% SDS, 100 mM Tris-HCl, and protease/ phosphatase inhibitors (Roche). 10 to 20 μg of protein were separated on 4–12% gradient gels (Invitrogen). Proteins were transferred to a PVDF or nitrocellulose membrane with a semi-dry blotter (Bio-Rad). Membranes were blocked for 1 h (RT) in TBS, 0.1% Tween-20 with 5% w/v nonfat dry milk, incubated with primary antibody over night (6°C) in TBS, 0.1% Tween-20 with 5% nonfat dry milk or 5% BSA, and then incubated with HRP-coupled secondary antibody for 1 h (RT). After application chemiluminescence reagent, membranes were exposed to x-ray films. Primary antibodies against the following antigens were used: human IKK2 (Abcam Y466), IKK1/2 (Santa Cruz sc-7607, lot H2208), ERK2 (Santa Cruz sc-154, lot F0210), p21 (Santa Cruz sc-6246, lot A1209), Stat1 (Cell Signaling 9172, lot 14), phospho-Stat1 (Cell Signaling 9167, lot 6), and luciferase (Promega G7451).
+ Open protocol
+ Expand
3

Protein Expression Analysis by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blots were performed using standard procedures. Membranes were blocked with 5% milk in TBS containing 0.1% Tween 20, and incubated with antibodies specific for p21, p53 and caspase 3 (Santa Cruz biotechnologies: Sc 6246, Sc55476, Sc7272 respectively), cleaved caspase 3, and cleaved PARP-1 (Cell signaling technologies # 9661S and # 5625P) and β-actin (A3853, Sigma Aldrich, St. Louis, MO). Immunoreactive bands were visualized by chemiluminescence (RPN 2232, Amersham ECL western blotting detection kit, Piscataway, NJ). Relative densitometric values (expression of protein of interest normalized to ß-Actin) were determined using Image J Software (NIH) and represents the mean of two blots from two independent experiments.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!