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7 protocols using propiolic acid

1

Functionalized Polystyrene Microparticles

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Sodium p-styrenesulfonate hydrate (TCI, > 93.0%) (NaStS); copper(I) bromide 98% (Sigma-Aldrich, Seoul, South Korea) (CuIBr); 4-(bromomethyl)benzoic acid 97% (Alfa Aesar, Seoul, South Korea) (BMB); 2,2′-bipyridine (bpy) 99.5% (Junsei, Tokyo, Japan); 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (TCI, > 98.0%) (DMTMM); propiolic acid (TCI, > 97.0%) (PA); 1-hexylamine 99% (Sigma-Aldrich) (HA); and ninhydrin (TCI, > 98%) were used as received, without further purification. Silica gel 60 (Merck, 0.063-0.200 mm) was used for the column chromatography while tetrahydrofuran (Duksan, extra pure grade) (THF) was used to improve the purity of the polymer through solvent-precipitation. Deuterium oxide 99.9% D (Cambridge Isotope Laboratories, Inc., Seoul, South Korea) (D2O) was used as the NMR solvent. Polystyrene microparticles (5% w/v, 2.0–2.2 μm diameter) having surfaces functionalized with amine groups, were procured from Spherotech, IL, Illinois, USA.
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2

Synthesis and Characterization of Porous Amorphous Carbon Nanospheres

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The experimental setup used in this work to synthesize amorphous carbon nanospheres (Fig. 1) is shown in Figure S1. Argon was used as the carrier gas at a flow rate of 1 L/min. The carrier gas was flowed through the reactor for at least 30 min to purge the system prior to the addition of the precursor solution which was prepared by stoichiometrically mixing propiolic acid (95% from sigma-aldrich) with coressponding alkali hydroxides (99.99% from sigma-aldrich). The obtained black powders were washed and centrifuged with deionized water for at least 5 times to remove any salt formed during synthesis. The N2 adsorption-desorption was carried out using Micromeritics ASAP 2020 physisorption analyzer to determine the density of porous carbon nanospehres studied in this work. TEM images were taken with a JEOL 2100 transmission electron microscope with an accelerating voltage of 200 kV. SEM images were taken using a Hitachi S4800 field-emission scanning electron microscope with an accelerating voltage of 10 kV. Powder X-ray diffraction patterns (PXRD) of the product were obtained with a Japan Rigaku DMax-γA rotation anode X-ray diffractometer equipped with graphite monochromatized Cu Kα radiation (λ = 1.54178 Å). Raman spectra were obtained directly from a thin film of carbon samples deposited on Si wafers on a Horiba Jobin-Yvon LabRAM Raman Spectrometer (excited with a 532 nm laser).
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3

Purification of Malonate Semialdehyde Decarboxylase

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Chemicals, biochemicals, buffers, and solvents were purchased from Sigma-Aldrich Chemical Co. (St. Louis, MO), Fisher Scientific Inc. (Pittsburgh, PA), Fluka Chemical Corp. (Milwaukee, WI), or EMD Millipore, Inc. (Billerica, MA). Sodium phosphate buffer salts were at least 99.99% pure or greater, as indicated by the manufacturer. Propiolic acid (98%, 8) and 2-butynoate (10) were purchased from Sigma- Aldrich. Both were purified further prior to use by distillation (8) or recrystallization (10). 2,3-Butadienoate (9) was synthesized according to published methods.14 The DEAE- Sepharose and Phenyl-Sepharose 6 Fast Flow resins used for protein purification were obtained from Sigma-Aldrich Chemical Co. (St Louis, MO). The Econo-Column chroma- tography columns were obtained from BioRad (Hercules, CA). The Amicon stirred cell concentrators and the ultrafiltration membranes (10000 Da, MW cutoff) were purchased from EMD Millipore Inc. Malonate semialdehyde decarboxylase (MSAD) was purified as described previously.10 (link)
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4

Purification and Characterization of N2 Enzyme

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Chemicals, biochemicals, buffers, and solvents were purchased from Sigma-Aldrich Chemical Co. (St. Louis, MO), Fisher Scientific Inc. (Pittsburgh, PA), Fluka Chemical Corp. (Milwaukee, WI), or EMD Millipore, Inc. (Billerica, MA). 2-Hydroxymuconate (2-HM)11 and 3-bromopropiolate (3-BP)12 were synthesized by the indicated references. Phenylenolpyruvate (PP) was purchased from Fluka Chemical Corp. (Milwaukee, WI) as the crystalline free acid, which exists exclusively in the enol form. Propiolic acid (98%) was purchased from Sigma-Aldrich, and purified further prior to use by distillation. N2 was purified by a literature procedure.13 (link) N2 is an enzyme from Gammaproteobacteria bacterium SG8_31 (UniProt accession A0A0S8FF56) and is in the 4-oxalocrotonate tautomerase (4-OT) subgroup, as described elsewhere.13 (link) The DEAE Sephadex, Phenyl-Sepharose 6 Fast Flow, and Sephadex G-75 resins were obtained from GE Healthcare Bio-sciences (Pittsburgh, PA). The Econo-Column® chromatography columns were obtained from BioRad (Hercules, CA). The Amicon stirred cell concentrators and the ultrafiltration membranes (3,000 or 5,000 Da, MW cutoff) were purchased from EMD Millipore Inc.
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5

Synthesis of Functionalized Silica Particles

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Ethanol (99.8%, Merck), Tetraethyl orthosilicate (TEOS, 99%, Sigma-Aldrich), Ammonia solution (NH4OH, 25%, Merck), Polydiallyldimethylammonium chloride (Poly-DADMAC, 400–500 kDa, 20 wt%, Sigma-Aldrich), Trimethoxy[3-(methylamino)propyl]silane (MAPTMS, 97%, Sigma-Aldrich), 1-Octadecanol (Octadecanol, 99%, Sigma-Aldrich), Toluene (99.85%, Fisher Scientific), Toluenesulfonic acid-p monohydrate (pTsOH, 98%, Sigma-Aldrich), Propiolic acid (96%, Sigma-Aldrich), Isopropanol (technical grade), Deionized water (Milli-Q, Merck-Millipore). All products were used as received.
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6

Isolation and Activation of Human T Cells

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RPMI-1640 medium, lymphoprep, 0.9% saline (NaCl), millipore filter (0.22 μM), fetus calf serum (FCS), L-glutamine (200 mM; 100×), pen/strep (10,000 unit/ml pen and 10,000 units/ml strep), MEM sodium pyruvate (100 mM), non-essential amino acids (10 mM; 100×). IL-2 (100 IU/ml) were from GIBCO Life Technologies, (USA). Human recombinant interleukin-2 and interleukin-15 were from Novartis (Switzerland) and Miltenyi Biotec (Germany), respectively. Mouse monoclonal antibodies specific for CD3 (UCHT1), TCR-Vγ9 (Immu360) were from Beckman Coulter (USA). Fixable aqua dead cell stain kit was from Invitrogen-Life Technologies (USA). Human IgG, methanol, aniline, benzaldehyde, propiolic acid, cyclohexyl isocyanide, dimethyl sulfoxide (DMSO) and 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyltratrazolium bromide were purchased from Sigma Aldrich (USA). Zoledronic acid injection (4 mg) were purchased from Cipla, (India). HL-60 and K562 cell lines were received from ATCC (USA).
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7

PLLA Surface Functionalization and Modification

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Poly-L-lactide (PLLA) (Corbion, Amsterdam, The Netherlands) was used to prepare films with a thickness of 0.7 µm. Chloroform (>98%, Macron Fine Chemicals, Gliwice, Poland), methanol (MeOH, 98%, Panreac, Damrstadt, Germany), acetic acid (>98%, Sigma Aldrich, Steinheim am Albuch, Germany), hydrochloric acid (HCl, 37%, Panreac, Darmstadt, Germany), and Milli-Q water were used as solvents. Sodium hydroxide (99%, Panreac, Darmstadt, Germany), sodium hydrogen carbonate (NaHCO3, 99%, Merck, Darmstadt, Germany), sodium carbonate (Na2CO3, 98%, Panreac, Darmstadt, Germany), N-(3-dimethylaminopropyl)-N-ethylcarbodiimide hydrochloride (EDC·HCl, 98%, Sigma Aldrich, Beijing, China), N-hydroxysuccinimide (NHS, 98%, Sigma Aldrich, St. Louis, MO, USA), propiolic acid (95%, Sigma Aldrich, Poland), (S)-(-)-tryptophan (98%, Panreac, Darmstadt, Germany), and amoxicillin (98%, Sigma Aldrich, St. Louis, MO, USA) were used as reagents for the PLLA surface preactivation and functionalization.
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