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Tcf8 zeb1

Manufactured by Cell Signaling Technology
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TCF8/ZEB1 is a protein that functions as a transcription factor, regulating gene expression. It is involved in the epithelial-mesenchymal transition process. The product provides a tool for researchers to study the role of TCF8/ZEB1 in cellular and biological processes.

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9 protocols using tcf8 zeb1

1

Cytotoxicity and Apoptosis Assay

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DMEM, fetal bovine serum, penicillin-streptomycin solution, and 0.25% trypsin were obtained from Corning; DMSO (sigma); Cell Counting Kit-8 (CCK-8) from Dojindo; Annexin V-FITC apoptosis detection kit (BD Pharmingen™). β-actin was purchased from Abgent. Cyclin D1, Cyclin D3, CDK4, p18, caspase-3, caspase-7, PARP, E-cadherin, N-cadherin, and TCF8/ZEB1 antibodies were purchased from Cell Signaling Technology. Lamin B1, NOV, and the HRP-labeled anti-mouse and anti-rabbit antibodies were from Santa Cruz Biotechnology.
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2

Western Blot Analysis of Cell Signaling

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Following treatment with drugs, cells were lysed and whole cell fractions were isolated as previously described [17 (link)]. Proteins (10–30 μg) were separated by 10%–12% (w/v) polyacrylamide gel electrophoresis and electroblotted to PVDF membranes. After blocking with non-fat milk for 1 h, membranes were incubated overnight with the following primary antibodies (1:1000 dilution) from Cell Signaling Technology (Danvers, MA, USA): E-Cadherin (Cat #3195), N-Cadherin (Cat #13116), TCF8/ZEB1 (Cat #3396), β-Catenin (Cat #8480), Vimentin (Cat #5741), phospho-Akt (Ser473) (Cat #4060), Akt (Cat #9272), phospho-IGF-I Receptor β (Tyr1135/1136) (Cat #3024), IGF-I Receptor β (Cat #9750), phospho-PI3 Kinase p85 (Tyr458)/p55 (Tyr199) (Cat 4228), PI3 Kinase p85 (Cat 4257), phospho-mTOR (Ser2448) (Cat #5536), mTOR (Cat #2983). β-Actin (Cat #8457) was used at the same time as a loading control. After incubation with the secondary antibody (HRP-conjugated; 1:5000 dilution) for 1 h, at room temperature, the conjugates were developed and visualized using a Molecular Imager FXTM System (BioRad; Hercules, CA, USA).
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3

Investigating Paclitaxel and JNK-IN-8 Signaling Pathways

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Paclitaxel (PTX) was purchased from Bristol-Myers Squibb, dissolved in Ethanol to make 7 μM stock concentration. JNK-IN-8 (Calbiochem, UK), with a working concentration of 10 µM was prepared in DMSO. MDR1/ABCB1, E-cadherin, N-cadherin, Vimentin, Snail, TCF8/ZEB1, β-catenin, Axin-1, Claudin, PI3K p110γ, p-PDK-1, Akt, p-Akt, p-c-Raf, Cyclin D1, p-GSK3β, p-p38 MAPK, p38 MAPK, p-p44/42, c-jun, p- SAPK/JNK, SAPK/JNK, p-AMPK, Wnt3a, Wnt5a/b, p-LRP6, LRP6, Dvl2, Dvl3, β-actin, GAPDH primary, and secondary antibodies were used at 1:1000 dilutions and were from Cell Signaling Technology (CST, Beverly, MA, USA).
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4

NSCLC Cell Line Nitric Oxide Exposure

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The non-small cell lung cancer (NSCLC) cell lines H23, H292, A549, and H460 were obtained from the American Type Culture Collection (Manassas, VA). The cells were cultured in RPMI 1640 supplemented with 5% fetal bovine serum (FBS), 2 mM L-glutamine, and 100 units/mL penicillin/streptomycin. The cells were incubated in a 5% CO2 environment at 37°C. For NO exposure, cells were cultured in medium containing DPTA NONOate (at nontoxic concentrations) for 14 days. The culturing medium was replaced by freshly prepared medium containing DPTA NONOate every 2 days. Phalloidin tetramethylrhodamine B isothiocyanate, dipropylenetriamine NONOate (DPTA NONOate), and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were obtained from Sigma Chemical, Inc. (St. Louis, MO, USA). Hoechst 33342 was obtained from Molecular Probes, Inc. (Eugene, OR). Antibodies for caveolin-1, vimentin, snail, TCF8/ZEB1, E-cadherin, ZO-1, N-cadherin, β-catenin, and β-actin, as well as peroxidase-conjugated secondary antibodies were obtained from Cell Signaling Technology, Inc. (Danvers, MA).
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5

Antibody Use in Western Blot

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The following antibodies were used for western blot: RAP80,6 vimentin (#5741; Cell Signaling Technology, Inc. Danvers, MA, USA), E‐cadherin (#3195; Cell Signaling Technology) and TCF8/ZEB1 (#3396; Cell Signaling Technology, Inc. Danvers, MA, USA), c‐myc (sc‐40; Santa Cruz Biotechnology, Texas, USA) and β‐actin (sc‐477778; Santa Cruz Biotechnology, Texas, USA). Indocyanine Green (ICG) was purchased from Dongindang Pharm (Siheung, Korea).
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6

Western Blot Analysis of EMT Markers

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Huh7 cell lines transfected with SSBP2 siRNA or NC-siRNA were harvested, and total cell lysates were prepared. The cell lysates were separated by SDS-PAGE and transferred onto nitrocellulose membranes. After blocking with 5% skim milk, the membranes were incubated with antibodies against SSBP2 (rabbit monoclonal, ab177944, Abcam), E-cadherin (rabbit monoclonal, #3195, Cell Signaling, Danvers, MA, USA), N-cadherin (rabbit monoclonal, #13116, Cell Signaling), TCF8/Zeb1 (rabbit monoclonal, #3396, Cell Signaling), Twist1 (rabbit monoclonal, #46702, Cell Signaling), and Beta-actin (rabbit monoclonal, #4970, Cell Signaling). The bound antibodies were detected with HRP-conjugated secondary antibodies and visualized using chemiluminescence reagent (Amersham Biosciences, Little Chalfont, UK).
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7

Mitochondrial Profiling of Melanoma Cells

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Cytosolic and mitochondrial fractions were isolated from melanoma cells using the Cell Mitochondria Isolation Kit (Beyotime, Shanghai, China). Western blot was performed as described previously [42 (link)]. Proteins were extracted and analyzed using antibodies targeting the following human proteins: FAH (Abcam), COX-IV (Beyotime), FH, ME1, PC, PDHB, CS, OGDH, IDH3A, ACACA, ACLY, HK2, PFKM, PKM, SLC2A1, G6PD, PRPS1, CDC5L (Proteintech, Wuhan, China), N-Cadherin, E-Cadherin, TCF8/ZEB1 (Cell Signaling Technology, Beverly, MA, USA), and β-actin (Abcam) at the recommended dilutions.
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8

Comprehensive Protein Expression Analysis

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The following primary antibodies were used for indicated experiments; western blotting: p-ALK (Tyr1604), t-ALK, p-HER3, t-HER3, β-actin (13E5), t-HER2, p-Akt, t-Akt, E-cadherin, Vimentin, TCF8/ZEB1, and GAPDH, (1:1000 dilution; Cell Signaling Technology), and p-Erk1/2 (Thr202/Tyr204), t-ERK1/2, and t-EGFR (1:1000 dilution; R&D systems); immunohistochemistry: Vimentin (ACR 048A, C; Biocare Medical, Concord, CA, USA), E-cadherin (M3612; Dako, Santa Clara, CA, USA) and ZEB1 (ab180905; Abcam, Cambridge, UK).
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9

Western Blot Analysis of Cellular Proteins

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Proteins were extracted from the cells using the CytoBuster Protein Extraction Reagent (Merck Chemicals, UK), and the protein concentrations were determined using a BCA assay kit (Beyotime). Following protein separation by SDS-polyacrylamide gel electrophoresis (PAGE), proteins were transferred onto equilibrated polyvinylidene difluoride membranes (Jianglai Biotechnology, China). After incubation with specific primary antibodies, including rabbit anti-human RASSF10 (Abcam, ab113105), p53 (Santa Cruz, sc-6243), p21 (Santa Cruz, sc-6246), Bcl-2 (Santa Cruz, sc-7382), Bax (Santa Cruz, sc-526), E-cadherin (BD biosciences, 610181), N-cadherin (Santa Cruz, 8C11), Vimentin, ZO-1 (Santa Cruz, sc-6260), TCF-8/ ZEB1 (Cell Signaling Technology, 3396) and β-catenin (Cell Signaling Technology, 9582) at 4°C overnight and incubation with secondary antibodies, including horseradish peroxidase (HRP) conjugated goat anti-rabbit IgG (Santa Cruz, sc-2004), proteins were visualized using ECL Plus Western Blotting Detection Reagents (GE Healthcare, UK). β-actin served as the internal reference.
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