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3 protocols using rabbit polyclonal anti gfp

1

Immunohistochemical Analysis of Cell Markers

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Immunohistochemical staining was performed as previously reported (Zhang et al., 2015). On day 7 or 21 following PCI, the brains were removed, and 5-µm frozen coronal sections were prepared. After antigen retrieval, sections were immunolabeled with rat monoclonal anti-BrdU (1:500; Accurate Chemical & Scientific), rabbit polyclonal anti-GFP (1:200; Santa Cruz Biotechnology), mouse monoclonal anti-NeuN (1:500; Chemicon), rabbit monoclonal anti-GFAP (1:200; Chemicon), mouse monoclonal anti-RIP (1:50; kind gift from Dr Xu XM, University of Louisville School of Medicine) and mouse monoclonal anti-NgR1 (1:200; Biogen Idec, Inc.) overnight at 4°C. After washing with PBS, the sections were incubated with goat anti-rabbit IgG Alexa Fluor 488, goat anti-rat IgG Alexa Fluor 488, goat anti-mouse IgG Alexa Fluor 594 and donkey anti-rabbit IgG Alexa Fluor 594 (1:1000; Abcam) at room temperature for 1 hour. Cells double-positive for BrdU/NeuN, GFP/GFAP and GFP/RIP were counted. Positive cells were also visualized using a motorized inverted microscope (IX81-ZDC2; Olympus, Hamburg, Germany).
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2

Worm Immunostaining of Tubulin Modifications

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Worm immunostaining was performed as described [50] (link). Briefly, mixed-stage animals were flash-frozen in liquid nitrogen and fixed in 2% paraformaldehyde on ice for at least 4 hours, permeabilized by Tris-Triton, and subjected to series of reduction and oxidation by sequential β-mercaptoethanol, dithiothreitol (DTT) and hydrogen peroxide treatment in 1% borate base buffer, and stained with primary antibodies in PBST-A. The following primary antibodies were used in this study: 6-11B-1 (mouse monoclonal anti-K40 acetylated α-tubulin, 1∶500, Santa Cruz Biotech), GT335 (mouse monoclonal anti-polyglutamylated tubulin, 1∶100, Enzo Life Sciences), rabbit polyclonal anti-detyrosinated tubulin (1∶200, Millipore), YL1/2 (rat monoclonal anti-tyrosinated tubulin, 1∶200, Santa Cruz Biotech), and rabbit polyclonal anti-GFP (1∶250, Santa Cruz Biotech). Secondary antibodies are goat anti-rabbit, goat anti-rat or goat anti-mouse IgG conjugated with Alexa488 or Alexa568 used at 1∶100 (Molecular Probes). Animals were counterstained with DAPI at 1∶1000 diluation in 2% n-propylgallate (NPG) and observed with the Zeiss AxioImager M2 imaging system. For fluorescence confocal microscopy, L4 to young adult hermaphrodite animals were anesthetized with 1% sodium azide, mounted on agar pad, and observed under Zeiss LSM700 confocal imaging system.
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3

Antibody Validation and Affinity Purification

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The antibodies employed were rabbit polyclonal anti-BCR (Santa Cruz), rabbit polyclonal anti-TANC2 (Bethyl), polyclonal rabbit-anti USP9X (Abcam), mouse monoclonal anti-β-actin (Sigma), mouse monoclonal anti-Flag (Sigma), rat monoclonal anti-HA-peroxidase (Roche), rabbit polyclonal anti-dsRed from Clontech (detects mCherry) mouse monoclonal anti-Myc (Santa Cruz), rabbit polyclonal anti-GFP (Santa Cruz). Anti-rabbit and anti-mouse horseradish peroxidase (HRP)-conjugated secondary antibodies (Thermo Scientific). The agarose antibody-conjugated beads were protein A/G beads (Pierce), anti-Flag (Santa Cruz), and anti-GFP
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