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8 protocols using crystal violet staining solution

1

Transwell Assay for Cell Migration

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Cell migration was assessed through Transwell assays. HUVECs and HCMECs with different treatments were added to the top-chamber inserts of Transwell assay plates (BD Biosciences, USA), while the bottom of each chamber was filled with 600 μL of medium containing 10% fetal bovine serum. After being cultured at 37° C for 24 h, the cells that had migrated through the filter membrane were washed three times with 1× phosphate-buffered saline (PBS), fixed in 4% paraformaldehyde (pre-cooled at 4° C) and stained with a crystal violet staining solution (KeyGEN BioTECH, China). The cells that had migrated were then counted under a microscope (Nikon, Japan).
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2

Colony Formation Assay Protocol

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Cells were seeded into 6-well plates (Jet Bio-Filtration) in triplicate at a density of 2000 cells per well and cultured for 2 weeks. Subsequently, the cells were washed three times with PBS (HyClone, USA) and stained with crystal violet staining solution (KeyGEN BioTECH), followed by photoimaging under a microscope (Olympus, Japan). Colony formation rate = (number of colonies containing at least 50 cells/number of inoculated cells) × 100%.
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3

Luteolin Inhibits TGF-β Signaling

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Antibodies targeting TGFBR1, proliferative cell nuclear antigen (PCNA), Cyclin D1, MMP2, and MMP9 were purchased from Abcam (Cambridge, MA, United States). The p-TGFBR1 (Ser 165) antibody was purchased from MyBioSource (San Diego, CA, United States). Antibodies specific for Smad2, Smad3, p-Smad2 (Ser 465/Ser 467), p-Smad3 (Ser 423/Ser 425), BAX, BCL-2, and GAPDH were purchased from Cell Signaling Technology (Beverly, MA, United States). Crystal Violet Staining Solution was purchased from KeyGEN BioTECH (Nanjing, China). Luteolin was purchased from Chengdu Mansite Biotechnology (Chengdu, China). Other reagents used in this study were obtained from reagent companies.
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4

Cell Invasion Assay with Matrigel

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PLC-PRF-5 and HepG2 cells subjected to different treatments were added into the top-chamber inserts coated with Matrigel (BD Biosciences). The bottom chamber was filled with 500 µL of medium containing 10% FBS. The cells were cultured at 37 °C for 24 h. The cells transferred through the filter membrane at the bottom of the chambers were washed three times with 1× PBS, fixed in 4% paraformaldehyde (precooled at 4 °C), and stained with crystal violet staining solution (KeyGEN BioTECH). The invading cells were counted under a microscope (Nikon, Japan).
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5

Invasion Assay with Matrigel

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The cells subjected to different treatments were added in top-chamber inserts coated with Matrigel (BD Biosciences, Franklin Lakes, USA). The lower chamber was incorporated with 500 μL of the medium supplemented with 10% FBS and served as a chemotactic agent. After being cultured at 37°C for 24 h, the cells invading the lower chamber were fixed in 4% paraformaldehyde (pre-cooled at 4°C), stained with crystal violet staining solution (KeyGEN, Nanjing, China), and counted under an upright microscope (five fields per chamber).
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6

Synthesis and Functionalization of Multifunctional Nanoparticles

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For material synthesis, 1‐octadecylamine, oleic acid, ethanol, Ca(NO3)2, Na3PO4, (3‐aminopropyl) triethoxysilane (APTES), ammonia, hydrochloric acid (HCl), sodium hydroxide (NaOH) were purchased from Sinopharm Chemical Reagent Co., Ltd. Dox. N‐Hydroxysulfosuccinimide sodium salt (Sulfo‐NHS) was purchased from Shanghai Macklin Biochemical Co., Ltd. Phosphate buffered saline (PBS), EDC, and Dox were purchased from Sigma‐Aldrich Chemical Reagent Co., Ltd. Anti‐CD44 antibody was purchased from BioLegend (America)
For cell experiments, minimum Essential Medium (MEM), α−minimum essential medium (α−MEM), fetal bovine serum (FBS), and Penicillin–Streptomycin solution (P/S) were purchased from Gibco (America). Cell Plasma Membrane Staining Kit with DiI (Red Fluorescence), Hoechst33342, propidium iodide (PI), and calcein acetoxymethyl ester (Calcein‐AM) were purchased from Beyotime Biotechnology Co., Ltd (China). DAPI was purchased from Abcam. CCK‐8 was purchased from Dojindo (Japan). Crystal violet staining solution and Annexin V‐kFluor488/PI staining assay were purchased from KeyGEN BioTECH (China).
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7

Invasion Assay for Cancer Cell Migration

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For the invasion assays, PLC-PRF-5 and Hep3B cells subjected to different treatments were added in top-chamber inserts coated with matrigel (BD Biosciences). The bottom chamber was filled with 500 μL of medium containing 10% FBS. After being cultured at 37 °C for 24 h, the cells transferred through the filter membrane at the bottom of the chambers were washed three times with 1 × PBS, fixed in 4% paraformaldehyde (pre-cooled at 4 °C), and stained with crystal violet staining solution (KeyGEN BioTECH). The passed cells were counted under a microscope (Nikon, Japan).
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8

Wound Healing and Invasion Assays

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For wound-healing assay, the cells with or without overexpressed Pinin were seeded and cultured until a 90% confluent monolayer was formed. The cells were then scratched by a sterile pipette tip and treated in the FBS-free medium as instructed. Cell migration distances from the scratched area were measured in three randomly chosen fields under a microscope. Wound images were photographed at 0 and 48 h by using a light microscope (Nikon, Japan). For invasion assays, the cells with or without Pinin overexpression were added in top-chamber inserts coated with Matrigel (BD Biosciences, USA). The lower chamber was added with 500 μL of the medium supplemented with 10% FBS and served as a chemotactic agent. After being cultured at 37°C for 24 h, the cells invading into the lower chamber were fixed in 4% paraformaldehyde (precooled at 4°C) and stained with crystal violet staining solution (KeyGEN, Nanjing, China).
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