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3 protocols using ionomcyin

1

In vitro Cytokine and Proliferation Assay

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To determine cytokine production upon in vitro stimulation, splenocytes were stimulated with 20 ng/mL PMA (Sigma) and 0.5 μg/mL ionomcyin (Sigma), and incubated with 1 μL/mL Golgi Plug protein transport inhibitor (Becton Dickinson) for 4 h. Cells were stained as described above. To determine proliferation and IFNγ production upon in vitro TCR-mediated stimulation splenocytes were enriched for T cells using CD19 microbeads depletion (Miltenyi Biotec) or pan-T cell Isolation Kit II (Miltenyi Biotec) on LS columns (Miltenyi Biotec). Cells were plated in a 96-well plate coated with anti-CD3 (145-2C11) (BD) and anti-CD28 (37.51) (BD) was added to the medium.
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2

Comprehensive Lung Immune Cell Profiling

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Lungs were harvested, digested, and lung single-cell suspensions were restimulated with 50 ng/ml of PMA (Sigma Aldrich), 1 μg/ml of ionomcyin (Sigma Aldrich) and 0.07% Golgi-Stop (BD Biosciences) for 5 hours at 37⁰C in RPMI+10% FBS. Following restimulation, cells were stained with viability dye (UV Ghost dye 450, Tonbo), blocked with an anti-FcR antibody (clone 2.4G2), and surface stained with biotin-labeled anti-CD3 (clone 17A2), PE-Cy5 anti-CD4 (clone 129.19), BV786 anti-CD90.2 (clone 53–2.1), Alexa Fluor 700 anti-CD45 (clone 30-F11), Alexa Fluor 488 anti-CD25 (clone OC61), PE-Cy7 anti-CD127 (clone A7R34) and FITC anti-γδTCR (clone GL3) antibodies, followed by APC-Cy7 streptavidin staining (1:250). Cells were then fixed, permeabolized using the Foxp3/transcription factor staining kit (Tonbo), and intracellularly stained with PE-IL-13 (clone eBio13A), PE-Cy7 anti-IL-17A (clone eBio17B7), and/or PE-IL-4 (clone 11B11). Flow cytometry analysis was conducted on LSRII flow cytometer, and all data were processed using FlowJo software version 10.
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3

Intracellular Cytokine Staining Assay

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Splenocytes were seeded into 96-well plates at a density of 2 x 106 cells/well. Brefeldin A (Sigma, St. Louis, MO) and monensin (Sigma, St. Louis, MO) added to each well at final concentrations of 10 μg/ml. Env or Gag peptide pool was added to each well at a concentration of 2 μg/ml. Phorbol 12-myristate 13-acetate (PMA; Sigma, St. Louis, MO) and ionomcyin (Sigma, St. Louis, MO) at concentrations of 50 ng/ml and 500 ng/ml, respectively, were the positive controls. Cells were incubated for 6 hours at 37°C, 5% CO2. Afterwards, cells were washed and incubated with anti-CD4 (clone: GK1.5; BD Biosciences, San José, CA) and anti-CD8a (clone: 53–6.7; BD Biosciences, San José, CA) cell membrane antibodies. After 45 minutes, cells were washed, fixed in BD Perm/Fix (BD Biosciences, San José, CA), permeabilized, and stained for intracellular cytokines IL-2 (clone: JES6-5H4; BD Biosciences, San José, CA), IL-4 (clone: 11B11; Ebiosciences, San Diego, CA), TNF-α (clone: MP6-XT22; Ebiosciences, San Diego, CA), and IFN-γ (clone: XMG1.2; BD Biosciences, San José, CA). Cells were incubated for an additional 60 minutes at RT, washed, and resuspended in BD Perm/Wash. The analysis of cytokines was done with an LSR-Fortessa (BD Biosciences San José, CA).
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