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3 protocols using coenzyme a coa

1

Synthesis and Characterization of CPI-613 and CPI-157

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Highly purified CPI-613 and CPI-157 were synthesized from D,L lipoate as described previously
[18 (link)]. N-acetylcysteine (NAC), auranofin, resazurin, diaphorase, glutaredoxin-1, reduced glutathione, Triton X-100, digitonin, lauryl maltoside, dithiothreitol (DTT), NAD+, ADP, thiamine pyrophosphate, coenzyme-A (CoA), and N-ethylmaleimide (NEM) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Biotin-HDPD and gel filtration columns (PD10) were from Thermo Scientific (Waltham, MA, USA). 2',7'-dichlorodihydrofluorescein diacetate (DCF), dihydroethidium (DHE), and Amplex Red were from Life Technologies. Antibodies to Prx1, Prx3 and reduced lipoate were purchased from AbCam (Cambridge, MA, USA). Antibodies against dihydrolipoamide dehydrogenase (E3) were from Rockland Immunochemicals (Gilbertsville, PA, USA) and KGDH dihydrolipoamide succinyltransferase (E2) antibodies were from Cell Signaling (Danvers, MA, USA).
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2

Rice Plant Tissue Collection and Metabolite Extraction

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Sterilized seeds of wild-type rice plants (O. sativa L. spp. Japonica cv. Dongjin) were germinated on Murashige and Skoog (MS) medium (Duchefa, Harlem, Netherlands) in a growth chamber with a 12 h photoperiod and temperature of 28°C. Ten-day old seedlings were transferred to soil and grown in a greenhouse at 28°C during the day and 20°C at night. Stem and leaf samples were collected from 10-week-old rice plants, and panicle samples were collected from 14-week-old rice plants. Root and shoot samples were collected from 10-day old rice seedlings.
p-Coumaric acid, ferulic acid, sinapic acid, coenzyme-A (CoA) and reduced β-nicotinamide adenine dinucleotide phosphate (NADPH) for hydroxycinnamoyl-CoA production were purchased from Sigma-Aldrich (St. Louis, MO, USA). Reagents for buffers, media and other solutions were obtained from Sigma-Aldrich and Duchefa.
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3

Inflammatory Gene Regulation by Estrogens

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All estrogens were from Steraloids Inc. (see Supplementary Table 1). Pam3CSK4 (tlrl-pms) and ODN (tlr1-1826-1) were from InvivoGen. LPS (L3024), poly IC (P0913), diethyl maleate (D97703), sodium acetate (S5636), celastrol (C0869), myxothiazol (T5580-1MG), S1QEL1.1 (SML1948-5MG), and S3QEL-2 (SML1554-10MG) were from Sigma. Coenzyme A (CoA) and acetyl-CoA (Ac-CoA) from both Sigma (C4780, A2056) and Cayman (16147, 16160) were tested, and both behaved similarly in their rescue of proinflammatory gene expression in hydroxyestrogenpretreated macrophages. All in vitro LPS stimulations performed using 100ng/mL dose. Pam3CSK4, pIC, and ODN were used at 100ng/mL, 25µg/mL, and 1µM, respectively. MitoQ (89950) was from Cayman.
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