The largest database of trusted experimental protocols

M per extraction reagent

Manufactured by Thermo Fisher Scientific
Sourced in United States, France

M-PER Mammalian Protein Extraction Reagent is a nonionic detergent-based buffer designed for the rapid and efficient extraction of proteins from mammalian cells and tissues. It is a ready-to-use solution that facilitates the lysis of cell membranes and solubilization of proteins while maintaining protein integrity.

Automatically generated - may contain errors

18 protocols using m per extraction reagent

1

Protein Extraction from Hepatocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total cell lysates of HepG2 and cultured mouse hepatocytes cells and liver homogenates were extracted using M-PER Extraction Reagents (Thermo Fisher Scientific, Waltham, MA), as described.6 (link) The antibodies used in this study are listed in Supplemental Table 2 (http://links.lww.com/HC9/A133).
+ Open protocol
+ Expand
2

AH Modulates NF-κB Signaling Pathway

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cells (5×104 cells/well) were incubated with AH (0, 20, 40, and 80 μg/ml) for 1 h, followed by incubation in the presence of TNF-α (30 ng/ml). After 1 h incubation, the cells were washed with PBS and protein was collected by using M-PER Extraction Reagents (Thermo Scientific) containing protease and phosphatase inhibitor cocktail. The expression levels of p-IκB-α, p-p65NF-κB and β-actin (loading control) were determined using immunoblotting as described above.
+ Open protocol
+ Expand
3

EMT Pathway Regulation via siRNA

Check if the same lab product or an alternative is used in the 5 most similar protocols
All standard tissue culture reagents, including MCDB 131 medium, fetal bovine serum (FBS), and Penicillin-Streptomycin-Glutamine (100×), were obtained from Life Technologies (Paisley, UK). cOmplete™ EDTA-free Protease Inhibitor Cocktail was purchased from Roche (Basilea, Switzerland). TGF-β1 and TGF-β2 were obtained from R&D (Minneapolis, MN, USA). Enhanced Chemiluminescence (ECL) Western blotting substrate, M-PER Extraction Reagents, and NE-PER Nuclear and Cytoplasmic Extraction Kit were purchased from Thermo Scientific Pierce (Rockford, IL, USA). Small interfering RNA (siRNA) oligonucleotides were purchased from Dharmacon (Lafayette, CO, USA). Epithelial-Mesenchymal Transition (EMT were obtained from Cell Signaling Technology (Danvers, MA, USA). Goat anti-mouse antibodies, anti-rabbit antibodies conjugated with horseradish peroxidase, and mouse anti-GAPDH, -MRTF-A, and -MRTF-B were from Santa Cruz Biotech (Santa Cruz, CA, USA). X-fect was purchased from Clontech (Mountain View, CA, USA). Bradford, 30% acrylamide/bis 37.5:1 solution, ammonium persulfate (APS), 1,2-bis (dimethylamino) ethane (TEMED), glycine, and blotting membranes were obtained from Bio-Rad (Munich, Germany). MatrigelTM was from Corning (Tewksbury, MA, USA). All other chemicals and solvents (including H2O2) were of the highest analytical grade and were purchased from Sigma-Aldrich (Steinheim, Germany).
+ Open protocol
+ Expand
4

Protein Expression and Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
All reagents were obtained from Sigma-Aldrich unless stated otherwise. The tissue culture reagents, including McCoy’s 5A and DMEM medium, fetal bovine serum (FBS), were from Invitrogen (Eggenstein, Germany). Cell Line Nucleofector®Kit R was from Lonza (Allendale, NJ, USA). TriPure Reagent, LightCycler 480 SYBR Green I Master PCR reaction mix, PhosStop phosphatase inhibitor, and cOmplete Protease Inhibitor Cocktail were from the Roche Diagnostics Corporation (Indianapolis, ID, USA). All primers were made by Genomed (Warsaw, Poland). M-MLV Reverse Transcriptase was purchased from Promega Corp. (Madison, WI, USA). Enhanced Chemiluminescence (ECL) Western blotting substrate, M-PER Extraction Reagents, NE-PER Nuclear and the BCA Protein Assay Kit, Moloney Murine Leukemia Virus Reverse Transcriptase were from Thermo Scientific Pierce (Minneapolis, MN, USA). Rabbit anti-vinculin antibodies were from Cell Signaling (Danvers, MA, USA), goat anti-mouse antibodies, anti-rabbit antibodies, and mouse anti-GAPDH conjugated with horseradish peroxidase were purchased from Santa Cruz Biotech (Santa Cruz, CA, USA).
+ Open protocol
+ Expand
5

Protein Isolation and Western Blot for MMP13

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins were isolated from murine colon tissue or cells with the M-PER extraction reagent (Thermo Fisher Scientific, #78501) supplemented with PhosSTOP (Roche, #04906845001) and cComplete ULTRA Tablets (Roche, #05892953001) according to the manufacturer’s recommendations. SDS-PAGE followed by Western Blot was performed as described previously (6 (link)). The following antibodies were used for detection: mouse anti-human/mouse MMP13 (Merck Millipore, #MAB13426), HRP-conjugated mouse anti-mouse Actin (Abcam, #ab49900), horse anti-mouse HRP (Cell Signaling, #7076S).
+ Open protocol
+ Expand
6

Western Blot Analysis of Neural Stem Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein was isolated from NSCs using M-PER extraction reagent (Thermo Fisher Scientific, Waltham, MA, USA) and quantitated. A 30µg amount of denatured protein was resolved by SDS-PAGE and transferred to PVDF membranes, and non-specific binding was reduced by blocking in 5% non-fat milk. Primary antibodies rabbit anti-Mecp2 (1:1000, ab2829, Abcam, Cambridge, UK), rabbit anti-PSD-95 (1:1000, ab18258, Abcam, Cambridge, UK), rabbit anti-Synaptophysin (1:1000, ab32127, Abcam, Cambridge, UK), mouse anti-tau (1:1000, Tau46 #4019, Cell Signaling, Danvers, MA, USA), mouse anti-Clathrin1HC (1:1000, SC12734, Santa Cruz, TX, USA) or mouse anti-beta actin (1:5000, A1978, Sigma-Aldrich, St. Louis, MO, USA) was added to the PVDF membrane overnight at 4 °C. The next day, HRP-conjugated anti-mouse or anti-rabbit secondary antibodies (1:1000, anti-mouse HRP-31430; anti-rabbit HRP-31460, Thermo Fisher Scientific) were added. Chemiluminescence signals were captured on X-ray films, and the bands were quantified (GS-800 densitometer, Bio-Rad, Hercules, CA, USA).
+ Open protocol
+ Expand
7

Retinal Protein Extraction for Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
After defrosting, the retinas were homogenized in 20% weight-volume of the M-PER extraction reagent (Thermo Scientific 78503, Illkirch, France), using a pellet pestle motor homogenizer (KONTES) on ice. The homogenate was then incubated on ice for 15 min. and then centrifuged (15,000 × g, 4°C) for 15 min. Supernatant was recovered for Western blot analysis.
+ Open protocol
+ Expand
8

Anti-FLAG and Phospho-Specific Antibody Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-FLAG M2 (#F1804) and Anti-FLAG M2-HRP (#A8592) were purchased from Sigma-Aldrich and anti-Src antibody (#MA5-15120) was from Thermo Scientific. p-Src (Y416) (#2113), p-Abl (Y412) (#2865), p-Tyr-100 (#9411), p-Tyr-1000 (#8954), anti-GAPDH (#14C10), Myc Tag (mouse #2276 and rabbit #71D10), p-AKT (T308) (#13038), p-AKT (S473) (#4060), p70 S6 kinase (#9202), and phospho-p70 S6K (T389) (#9234) primary antibodies were purchased from Cell Signaling Technologies (CST). Secondary antibodies Goat anti-Mouse-HRP (#31430) and Goat anti-Rabbit-HRP (#31460) were from Thermo Scientific. Alexa Fluor 488 anti-mouse (#A11029) and Alexa Fluor 647 anti-rabbit (#A21245) were from Life Technologies. All primary antibodies were used at a 1:1000 dilution and secondaries at 1:5000. Protease inhibitor cocktail (#P8340), Phosphatase inhibitor cocktail 2 (#P0044) and 3 (#P5726) were purchased from Sigma-Aldrich. NeuCode labeling reagents L-Lysine:2HCl (3,3,4,4,5,5,6,6-D8, 98%) (#DLM-2641-0) and L-Lysine:2HCl (13C6, 99%, 15N2, 99%) (#CNLM-291-H-0.25) were from Cambridge Isotopes. Rapamycin was from Cayman Chemical and M-PER extraction reagent (#78501) was from Thermo Scientific. All restriction enzymes and DNA polymerases were purchased from NEB (Ipswich, MA). Oligonucleotides and gBlocks Gene Fragments were purchased from IDT and all constructs were verified by DNA sequencing (Quintara Biosciences).
+ Open protocol
+ Expand
9

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
For Western blot analysis, proteins were purified from cells by using M-PER Extraction Reagent (Thermo Scientific, Waltham, MA) supplemented with a protease and phosphatase inhibitor cocktail (Thermo Scientific). Total proteins were quantified with a BCA Protein Assay Kit (Thermo Scientific). The primary antibodies used in this study were: anti-CDC73 (A264, Cell Signaling Technology, Danvers, MA) at 1∶1000 dilution, anti-tGFP (TA150041, OriGene Technologies) at 1∶10000 dilution, anti-cyclin D1 (SP4, Abcam, Cambridge, UK) at 1∶500 dilution, anti-c-myc (N-262, Santa Cruz Biotechnology Inc.) at 1∶500 dilution, and anti-β-actin (AC-15, Sigma-Aldrich, Saint Louis, MO) at 1∶10000 dilution.
+ Open protocol
+ Expand
10

Immunoblotting of Thymic Cell Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins were prepared from thymic tissues and primary thymic epithelial cells using respectively T-PER extraction reagent or M-PER extraction reagent (Thermo Fisher) supplemented with "HALT protease and "phosphatase inhibitor cocktail” (Thermo Fisher). Lysates were homogenized by sonication on ice and proteins were quantified in the collected supernatants. Twenty to thirty micrograms of total proteins were separated on SDS-PAGE, transferred onto PVDF membrane and used for the detection of Akt with "Akt1 Precision Ab antibody" (BIORAD VMA00253), phospho-Akt with "phospho-Akt (Ser 473) antibody" (Cell signaling, 9271S), mTOR with "mTOR PrecisionAb Antibody" (BIORAD, VPA00174), phospho mTOR with "phospho-mTOR (Ser2448) Antibody" (Cell signaling, 2971), phospho p70S6k with "phospho-p70 S6 Kinase (Thr389) Antibody" (Cell signaling, 9205) and β-actin (Monoclonal Anti-β-Actin−Peroxidase antibody, Sigma) as recommended. Immunoreactive bands were detected with goat anti-rabbit IgG (whole molecule)-peroxidase antibodies produced in goat (Sigma) and revealed using the "Clarity Max Western ECL Blotting Substrate" (BIORAD) on a "ChemiDoc Imaging System" (BIORAD).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!