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Dm5500

Manufactured by Leica
Sourced in Germany, United Kingdom

The DM5500 is a high-performance light microscope designed for a variety of laboratory applications. It features a modular design, allowing for customization and integration with various accessories to suit specific research needs. The DM5500 provides advanced optical performance and functionality to enable precise observation and analysis of samples.

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106 protocols using dm5500

1

Immunocytochemical Localization of Foxo3a

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For immunocytochemistry staining of Foxo3a, cells were fixed with 4% paraformaldehyde and permeabilized using Triton X-100 (0.2% in PBS). Cells were then incubated with anti- Foxo3a (1:100, Millipore, Billerica, USA) over night at 4°C. Cells were incubated for 2 hours at room temperature with Alexa 568-conjugated goat anti-rabbit IgG (1:400, Molecular Probes, Eugene, OR) after washing 3 times. Cells were washed in PBS and were counter stained with DAPI for nuclear identification. Foxo3a (red) or DAPI (blue) stained cells were imaged using the Leica DM 5500 (Leica Microsystem, Switzerland).
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2

Actin Filament Staining of Differentiated MDMs

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MDMs were differentiated on glass coverslips as described above. For actin filament staining, the cells were incubated with 5 µM LPA species for 30 min, fixed with 4% paraformaldehyde for 10 min at room temperature, and permeabilized with 0.3% Triton X100 for 5 min. Actin filaments were stained with Phalloidin-California Red Conjugate (1:1000; AAT Bioquest, Sunnyvale, CA, USA) for 30 min at room temperature. Glass coverslips were mounted on microscope slides using mounting medium with DAPI (VEC-H-1200, Vector, Burlingame, CA, USA) and sealed with nail polish. Images were taken at 40× magnification and processed on a widefield microscope (Leica DM5500, Leica Microsystems, Wetzlar, Germany). Images of three random fields per sample were analyzed with imageJ 1.54 (https://imagej.net/ij/).
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3

Actin Filament Staining in Macrophage-Derived Cells

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MDMs were differentiated on glass coverslips as described above. For actin filament staining the cells were incubated with 50 µM AA for 24 h, fixed with 4 % paraformaldehyde for 10 min at room temperature and permeabilized with 0.3% Triton X100 for 5 min. Actin filament was stained with 1:1000 diluted Phalloidin-California Red Conjugate (AAT Bioquest, Sunnyvale, USA) for 30 min at RT. Glass coverslips were mounted onto the microscope slides using a drop of mounting medium with DAPI (VEC-H-1200, Vector, Burlingame, USA) and sealed with nail polish. Images were taken at 100× magnification and processed on a widefield microscope (Leica DM5500, Leica Microsystems, Wetzlar, Germany).
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4

Quantitative Analysis of Neuronal Cytoarchitecture

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Brains hemispheres were harvested from anaesthetized mice and immediately frozen in isopentane. 8-μm cryosections were collected and fixed with 4% paraformaldehyde. For immunostainings, sections were stained with 0,01% Thioflavin S (Sigma) for 15min at room temperature, and after washes in ethanol and PBS, stained with Hoechst (Life Technology). After washing in PBS, tissue sections were mounted with Dako mounting medium. Images were acquired using Leica DM 5500 (Leica Microsystems) CMOS camera 2900 Color at the same exposure time. Quantitative analysis of the immunofluorescence data was carried out by histogram analysis of the fluorescence intensity at each pixel across the images using Image J (Fiji; National Institutes of Health). Appropriate thresholding was employed to all the images of each single experiment to eliminate background signal in the images before histogram analysis. Fluorescence intensity and signal positive areas were calculated using the integrated “analyse particles” tool of the Fiji software, and statistical analysis were performed using Prism 6 (GraphPad Software).
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5

Visualizing Lipid Droplets in Yeast Cells

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Lipid droplets in yeast cells were visualized by fluorescence microscopy after staining with LD540 [64 (link),65 (link)]. Cells were grown 72 h to stationary phase in YPD medium or YPD medium supplemented with PSO on rotary shaker at 28 °C prior staining. The cell culture was diluted to OD = 2.0; then, the cells were washed three times in 50 mM Tris-HCl, pH 7.5 and suspended in 0.3 mL of 50 mM Tris-HCl, pH 7.5. LD540 (stock solution of 0.5 mg/mL in DMSO) was added to final concentration of 1 μg/mL, and the cells were incubated in the dark for 15 min at room temperature. The stained suspension was washed in 50 mM Tris-HCl (pH 7.5) and suspended in 0.5 mL of 50 mM Tris-HCl (pH 7.5); a 4 μL drop was observed under a fluorescence microscope Leica DM5500 (Leica Microsystems, Wetzlar, Germany) equipped with an Objective HCXFL OIL 100×, filter system Y3 for CY3 green, and Leica DFC340 FX Digital Cam DM5500 (Leica Microsystems, Wetzlar, Germany). Images were processed with LAS software (version 3.0).
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6

Fluorescence Imaging with Leica DM5500

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Leica DM5500 (Leica Microsystems, Wetzlar, Germany) fitted with a Photometrics cascade II 512b EMCCD camera was used for the fluorescence imaging with 40× objectives. Two filter cubes were used: GFP (excitation 470 nm, emission 525 nm) and TX2 (excitation 560 nm, emission 645 nm). All images were processed with SPOT5.5 imaging software.
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7

Quantitative Analysis of Neuronal Cytoarchitecture

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Brains hemispheres were harvested from anaesthetized mice and immediately frozen in isopentane. 8-μm cryosections were collected and fixed with 4% paraformaldehyde. For immunostainings, sections were stained with 0,01% Thioflavin S (Sigma) for 15min at room temperature, and after washes in ethanol and PBS, stained with Hoechst (Life Technology). After washing in PBS, tissue sections were mounted with Dako mounting medium. Images were acquired using Leica DM 5500 (Leica Microsystems) CMOS camera 2900 Color at the same exposure time. Quantitative analysis of the immunofluorescence data was carried out by histogram analysis of the fluorescence intensity at each pixel across the images using Image J (Fiji; National Institutes of Health). Appropriate thresholding was employed to all the images of each single experiment to eliminate background signal in the images before histogram analysis. Fluorescence intensity and signal positive areas were calculated using the integrated “analyse particles” tool of the Fiji software, and statistical analysis were performed using Prism 6 (GraphPad Software).
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8

Osteoclast Induction and Bone Resorption Assay

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To induce osteoclasts, RAW264.7 cells (5000 cells/cm2) were cultured in the presence of receptor activator of nuclear factor kappa-Β ligand (RANKL, 20 ng/ml), Mg (0 or 10 mM) and VC (0 or 50 μg/ml) for 4 days. Then quantitative real-time PCR (qRT-PCR) analysis and tartrate-resistant acid phosphatase (TRAP) staining (cat# 387, sigma) were conducted. TRAP-positive multinucleated cells with more than three nuclei were counted as osteoclasts under a light microscope. To further study the Mg effect on osteoclastogenesis induced by LPS or RANKL, RAW264.7 cells (5000 cells/cm2) were cultured with LPS (100 ng/ml) or RANKL (20 ng/ml) plus Mg (0 or 10 mM) for 4 days for TRAP staining and qRT-PCR, and for 6 days for bone resorption function testing with the medium changed every 3 days. Osteo Assay Surface 24-well Multiple Well Plate (Corning, Product Number 3987) was used for testing the resorption function with pit formation assay. After cell culture for 6 days, the cells on the plate were lysed by 4% NaClO and the plate was washed with deionized water. The pit area in each plate was imaged (Leica DM5500; Leica Micro-systems, Wetzlar, Germany) and analyzed by ImageJ (version 1.51, Wayne Rasband, National Institute of Heath, USA).
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9

Evaluating Mg and VC Effects on MC3T3-E1 Viability

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Tetrazolium (MTT) method and Live/Dead staining were performed to evaluate the effect of Mg and VC on the viability of MC3T3-E1 cells. For MTT test, the cells were seeded onto 96-well plates at a density of 2 × 103 cells/well. After overnight incubation, the cells were treated with different concentrations of methylprednisolone (MPS) or lipopolysaccharide (LPS) with/without Mg and VC supplemented for 24 h. Then cells were incubated with 50  μl (1 mg/ml) MTT solution at 37 °C in dark for 4 h. After discarding the MTT solution, 50  μl DMSO was added to each well, and the absorbance at 575 nm was detected. For Live/Dead staining, the cells were seeded onto 4-well chamber slides at a density of 1 × 104 cells/well. After overnight incubation, the cells were treated with different concentrations of MPS with/without Mg and VC supplemented for 24 h. Then cells were stained with live/dead cell imaging kit (488/570) (R37601, Invitrogen) and analyzed under a fluorescence microscope (Leica DM5500; Leica Micro-systems, Wetzlar, Germany).
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10

Cytogenetic Analysis of Fibroblast Cells

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For cytogenetic analysis, the karyotype with Bands‐G of the fibroblast cell cultures was performed by the Andalusian Public Health System Biobank. To carry out analysis, first, the cells are incubated in medium supplemented with 0.1 mg/ml of colcemide for 4 hr. Later, they are washed with PBS, trypsinized, and centrifuged. The pellet are resuspended in a hypotonic solution of KCl (0.075 mol/L), washed to remove the cytoplasm, and the nuclei are fixed with methanol/acetic in a 3:1 ratio (vol/vol). Finally, the metaphases are resuspended in 1 ml of fixative and are fixed in slides. G bands with trypsin‐Giemsa (GTG) are made, and a minimum of 20 metaphases are analysed for each cell line, assigning a karyotype formula according to the International System of Human Cytogenetic Nomenclature (McGowan‐Jordan, Simons, & Schmid, 2016). The karyotypes are analysed using a microscope Leica DM5500 and the Ikaros Karyotyping System (Metasystems).
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