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658 protocols using transwell chamber

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Cell Migration and Invasion Assay

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The cell migration assay was performed with transwell chamber (pores 0.8 μm, Merck Millipore, USA), while the cell invasion assay was implemented with Matrigel (BD Biosciences, USA) coated on the upper surface of the transwell chamber (pores 0.8 μm, Merck Millipore, USA). Cells that migrated or invaded through the membrane were fixed and stained with crystal violet. Images of five randomly selected fields of the fixed cells were captured, and the cells were counted. See Supplementary Materials and methods for detailed methods.
For the cell migration and invasion assay in the co-culture system, the mixed cells (the tumor cells were stably transfected with luciferase cDNA in advance) were resuspended in serum-free DMEM and then cultured in the upper chamber for 24 h. The cells that migrated or invaded through the membrane were isolated by the trypsin digestion method and quantified by measuring luciferase activity using a Luciferase Assay System (Promega Corporation, USA).
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Transwell Invasion and Migration Assay

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Before invasion assays, 30 μl of Basement Membrane Matrix (diluted 1:6 in PBS; Corning Life Science, Lowell, CA, USA) was applied to the bottom of a Transwell chamber (Millipore, Billerica, MA, USA) and placed in a 37 °C incubator for 5 h. The following steps were the same for the migration and invasion assays: cells (6 × 104) in serum-free media were added into the upper well of the Transwell chamber, and 800 μl of DMEM containing 10% FBS was added to the lower chamber, and then, the chamber was placed in a 37 °C incubator. After18h for migration assays or 36 h for invasion assays, cells were fixed with paraformaldehyde for 30 min, and stained for 3 min with crystal violet. Excess stain was washed away with PBS, and the bottom of the upper chamber was gently wiped with a cotton swab. After drying, the chamber was imaged, and the number of invading and migrating cells was calculated.
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Cell Invasion Assay using Transwell

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Cell invasion experiments were conducted utilizing Transwell chamber (Millipore, Burlington, MA, USA). Culture medium combined with 10% FBS was placed into the bottom chambers (#3268, Corning Inc., Corning, NY, USA), and each group of cells were firstly placed in culture medium and then placed into the top chamber. Then after 48 h of cells incubating at 37°C, cotton swab was used to remove those cells failed to migrate through the pores. Afterwards, Transwell chambers were fixed for 30 min using 4% paraformaldehyde, and were stained using 1% crystal violet (#C0775, Sigma-Aldrich, St. Louis, MO, USA) for 20 min. Finally, bottom chamber cells were quantified utilizing inverted phase-contrast microscope.
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Transwell Invasion Assay for Cell Lines

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The transwell chambers (8‐μm pore size, Millipore) were coated with matrigel (BD Biosciences) diluted with RPMI‐1640 (1:5) on the upper chamber in advance. The cells (A549‐Control, A549‐SELENBP1, H1299‐Control, and H1299‐SELENBP1) were seeded into the transwell chambers (8‐μm pore size, Merck, Millipore) with serum‐free media and each transwell chamber contained around 4 × 105 cells. Media containing 10% FBS was added to the lower chamber, cultured at 37°C incubator for 24 h, and then fixed in 4% paraformaldehyde; the noninvading cells on the upper of the chambers were removed with cotton wool; invasive cells located on the lower surface of the chamber were stained by crystal violet stain (Sigma Diagnostics). To count the invasive cells, pictures were taken using a Zeiss Imager Z2 microscope (Carl Zeiss; 200×).
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5

Lentiviral Knockdown in MCF-7 and 293T Cells

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MCF-7 breast cancer cell strains and 293T cells were purchased from the Shanghai Cell Resource Center of the Chinese Academy of Sciences (Shanghai, China). The pSPAX2, pMD2G and pLVX-shRNA1 vectors were purchased from Clontech Laboratories (Mountain View, CA, USA). The Plasmid Midi kit was purchased from Qiagen (Valencia, CA, USA). Opi-MEM, Escherichia coli DH5α and Taq DNA polymerase were purchased from Invitrogen Life Technologies (Carlsbad, CA, USA). T4 DNA ligase, BamHI and EcoRI restriction enzymes were purchased from New England Biolabs (Ipswich, MA, USA). Liposome Lipfectamine 2000, Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS) and Trypsin were purchased from Invitrogen Life Technologies. The gel extraction kit was purchased from Tiangen Biotech (Beijing) Co., Ltd. (Beijing, Japan). KOD high fidelity enzyme polymerase chain reaction (PCR) kit and Taq enzymes were purchased from Toyobo Co., Ltd. (Osaka, Japan). DNA ladder was purchased from Fermentas International, Inc., (Burlington, Canada). The Transwell chamber was purchased from Chemicon (Temecula, CA, USA).
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Transwell Assay for GC Cell Migration and Invasion

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The capacities of migration and invasion in HGC-27 and AGS cells were assessed based on the user’s guidebook of the transwell chamber (Chemicon, Temecula, CA, USA). Notably, for invasion assay, the transwell chamber was pre-coated with Matrigel (BD Biosciences, San Jose, CA, USA). Briefly, GC cells (1 × 105) in serum-free culture medium were added to the upper chamber, and the lower chamber was filled with the medium containing 10% FBS (Gibco, as chemoattractant). The cells remaining in the upper chambers were removed after incubation for 24 h, and the cells on the lower surface were fixed and stained with 0.1% crystal violet. Finally, a microscope (Tecan, Switzerland) was applied for the migrated or invaded cells.
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Transwell-Based Cell Invasion and Migration Assay

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Transwell chamber ([8.0 μm pore size; EMD Millipore]) with (or without) Matrigel (Becton Dickinson) was applied for the assessment of invasion (or migration) of LUSC cells. The cells in serum‐free medium were placed in the upper chamber, while the lower chamber was filled with medium supplemented with 10% bovine calf serum. Methanol was used to fix the cells after 48 hours, and crystal violet (0.1%) was employed to stain the cells. Finally, the cells that had migrated or invaded were examined under the microscope.
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8

Recombinant S100A4 Mediates Cell Migration

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To determine whether the recombinant S100A4 protein stimulated cell migration and invasion, cell motility and invasion assays were conducted in a Transwell chamber (EMD Millipore) (11 (link)), which was coated with Matrigel®. Assays were conducted according to the manufacturer’s instructions. Following overnight starvation in RPMI-1640 media and the addition of a medium containing 10% FBS to the bottom chambers as a chemoattractant, HeLa cells (1×105) were added to the top chambers of the 24-well transwell plates as the control group (C), whereas HeLa cells (1×105) with recombinant human S100A4 were added into another top chamber as the experimental group (E). The cells were then incubated for 24 h at 37°C. Non-motile cells on top of each chamber were removed by wiping with cotton swabs. The cells on the bottom of each chamber were fixed with 0.1% glutaraldehyde for 30 min, rinsed briefly with phosphate-buffered saline (PBS) and stained with 0.2% crystal violet (Ameresco, Inc., Framingham, MA, USA) for 20 min. The chambers were then washed thoroughly with PBS. The number of migrated or invaded cells was calculated under ×200 magnification and the mean for each chamber was determined. The results were calculated as the migration/invasion rate as compared with the parental control cells. Each experimental condition was conducted in duplicate and repeated at least three times.
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9

Transwell Assay for Cell Migration

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Transwell assay was used to evaluate the migration ability in different groups and was performed as follows: serum-free medium containing transfected 8 × 104 cells were seeded onto the bottom of the transwell chamber (Merck, German). The whole chamber was immersed in culture medium mixed with 12% FBS. After incubation at 37°C for 24 h, the membranes were fixed with methanol for 30 mins, stained in 0.5% crystal violet treatment for 15 mins, and finally washed. The number of cells were determined using phase-contrast microscopy (Olympus, Japan).
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10

Transwell Invasion Assay for T24 Cells

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A Transwell chamber (EMD Millipore, Billerica, MA, USA) was used for invasion assessment of T24 cells. Then, 2 × 105 T24 cells were placed into the top of the insert precoated with Matrigel (BD Biosciences, USA) and the medium+10% FBS was added into the lower chamber. After being maintained in a moist incubator under routine conditions for 24 h, cells that failed to invade were discarded, while cells that invade to the other side were fixed 10 min with 4% paraformaldehyde and stained 30 min with crystal violet. Five fields in each well were randomly selected after drying, and cells were counted under an inverted microscope.
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