The largest database of trusted experimental protocols

Pepstatin a

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Pepstatin A is a potent and selective inhibitor of aspartic proteases. It is a cyclic pentapeptide with the sequence Isovaleryl-Val-Val-Sta-Ala-Sta, where Sta represents statine. Pepstatin A binds tightly to the active site of aspartic proteases, such as pepsin, renin, and cathepsin D, inhibiting their enzymatic activity.

Automatically generated - may contain errors

9 protocols using pepstatin a

1

Neuronal Culture and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco’s Modified Eagle’s Medium (DMEM) (#11995065), Neurobasal Medium (#21103049), trypsin-EDTA 0.25% (#25200056), penicillin-streptomycin (#15140122), B27 Supplement (#17504944), and Glutamax (#35050061) were from Life Technologies (Carlsbad, CA, USA), Fetal calf serum (FCS) was from Internegocios SA (Mercedes, Argentina). The protease inhibitors, purchased from Santa Cruz Biotechnology (Dallas, TX, USA), were leupeptin hemisulfate (#295358), pepstatin A (#45036), aprotinin (#3595), and phenylmethylsulfonyl fluoride (#329-98-6). Monosialoganglioside GM2 (#1502) was obtained from Matreya (State College, PA, USA). The primary antibodies used were anti-P-PERK (#3179), anti-CHOP (#L63F7) (Cell Signaling Technology, Danvers, MA, USA), anti-CHOP (#MA1-250) (Thermo Fisher, Waltham, MA, USA), anti-MAP-2 (#PCK-554P) (Covance Inc. Princeton, NJ, USA), and anti-MAP-2 (#M2320) (Sigma, St. Louis, MO, USA).
+ Open protocol
+ Expand
2

Pharmacological Modulators of Cellular Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gefitinib (#G-4408), erlotinib (#E-4997), lapatinib (#L-4804), everolimus (#E-4040), and rapamycin (#R-5000) were obtained from LC Laboratories. MI-2–2 was obtained from Chemzon Scientific. E64d (#IED-4321-v) was obtained from Peptides International. Pepstatin A (#sc-45036) was obtained from Santa Cruz. 3-MA (#M9281) and chloroquine (#C6628) were obtained from Sigma. MI-463 and MI-503 were obtained from Wuxi Pharma. Spautin-1 was obtained as a gift from the lab of Dr. Costas Koumenis (University of Pennsylvania). C225 was obtained as a gift from the lab of Dr. Mark Greene (University of Pennsylvania).
+ Open protocol
+ Expand
3

Comprehensive Cellular Manipulation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
DAPT and dec-RVKR-cmk were from Merck. DON, OSMI-1, PUGNAc, glucosamine, insulin, heparin agarose, A23187, LY294002, and IGF2 were from Sigma-Aldrich. Bafilomycin A1, MG-132, PR-619, Leupeptin, E-64-d, and pepstatin-A were from Santa Cruz Biotechnology
+ Open protocol
+ Expand
4

Costunolide-Induced Oxidative Stress Pathway

Check if the same lab product or an alternative is used in the 5 most similar protocols
Costunolide (CTL) was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA) and dissolved at a concentration of 100 mM in dimethyl sulfoxide (DMSO) (Sigma, St. Louis, MO, USA). The 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), N-Acetyl-L-cysteine (NAC), 2′,7′-Dichlorofluorescin diacetate (DCFH-DA), Carbonyl cyanide 3-chlorophenylhydrazone (CCCP), and Rhodamine 123 (Rho 123) were purchased from Sigma (St. Louis, MO, USA). Pepstatin A was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Acridine Orange (AO), LysoTracker Red DND-99, and MitoSOX were purchased from Invitrogen (Carlsbad, CA, USA).
+ Open protocol
+ Expand
5

Preparation of PI3K/mTOR Inhibitor Stocks

Check if the same lab product or an alternative is used in the 5 most similar protocols
Stocks of LY294002, an inhibitor of PI3K-Akt (Sigma-Aldrich), BEZ235, a dual inhibitor of PI3K-Akt and mTOR (Selleck Chemicals), rapamycin, a mTOR inhibitor (Merk, Schiphol-Rijk, The Netherlands) and PF-4708671, an inhibitor of p70S6K (Selleck Chemicals) were dissolved in dimethyl sulfoxide (DMSO) (Sigma-Aldrich, St Louis, MO). All reagents were stored in 25 μL aliquots and frozen at −80°C. Other reagents including Earle's Balanced Salt Solution (EBSS) (Lonza), E-64-d (Santa Cruz Biotech, Santa Cruz, CA) and pepstatin A (Santa Cruz Biotech, Santa Cruz, CA) were also used.
+ Open protocol
+ Expand
6

Autophagy Modulation in Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Rapamycin (sc-3504, 5 mM in DMSO), wortmannin (sc-3505, 5 mM in DMSO), bafilomycin A1 (sc-201550, 100 uM in DMSO), E64D (sc-201280, 5 mg/ml in DMSO), pepstatin A (sc-45036, 5 mg/ml in DMSO) from Santa Cruz Biotechnology; chloroquine (C6628, 20 mM in water) from Sigma; LY294002 (#9901, 10 mM in DMSO) from Cell Signaling; mouse IFNγ (485MI/CF, 200 U/ul (100 ng/ul) in PBS/0.1%BSA) from R&D Systems.
+ Open protocol
+ Expand
7

Detailed Lipidomic Analysis of Primary Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Histopaque, p-nitrophenyl valerate (pNPVa), and LPS (E. coli 055:B5) were purchased from Sigma (St. Louis, MO, USA). AIM V® Serum Free Medium was purchased from Thermo-Fisher (Waltham, MA, USA). RIPA lysis buffer and protease inhibitors (phenylmethylsulfonyl fluoride, PMSF; 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBSF; bestatin; pepstatin A; leupeptin hemisulfate; and aprotinin) were from Santa Cruz Biotechnology (Dallas, TX, USA). Antibodies used for Western blots (anti-CES1, anti-MAGL, β-actin, goat anti-rabbit, and goat anti-mouse) were purchased from Abcam (Cambridge, MA, USA). Authentic 2-AG, anandamide, AA, and its deuterated analog AA-d8 were purchased from Cayman Chemical Company (Ann Arbor, MI, USA). Small molecules JZL184 and WWL113 were purchased from Sigma. CpG was purchased from InvivoGen (San Diego, CA, USA). Primary CES1 and MAGL antibodies for flow cytometry were purchased from Abcam. Fluorescence secondary antibodies for flow cytometry and antibodies against IL-6 used to neutralize IL-6 or perform ELISA were purchased from Biolegend (San Diego, CA, USA). For some of the experiments, monocyte-depleted (n = 1) and whole PBMCs (n = 5) were purchased from Astarte Biologics (Bothell, WA, USA).
+ Open protocol
+ Expand
8

Zymography Assay for MMP2/9 Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
Complete growth medium was replaced by serum-free medium for 24 hours in AP-1 cells cultured on a six-well plate. Conditioned medium was collected, treated with protease inhibitors (pepstatin A, PMSF and E-64, Santa Cruz Biotechnology Inc., Paso Robles, CA, USA), and subjected to zymography. Briefly, conditioned medium was concentrated (Microcon 30 K, Millipore Co, Bedford, MA, USA) and resuspended in SDS-PAGE sample buffer (without β-mercaptoethanol). Protein amount was estimated by BCA assay (Pierce, Rockforf, IL, USA). Samples were separated on 10% polyacrylamide gels containing 0.2% gelatin (Sigma). After electrophoresis, gels were washed in 2.5% Triton X-100 (Sigma) for 30 min and incubated for 16–24 hours at 37°C in a development buffer containing 50 mM Tris pH 8.0, 5 mM CaCl2 and 0.02% NaN3. Gels were stained with 0.2% Coomassie blue R250 (Amersham Co Arlington Heights, IL, USA) and destained with acetic acid/methanol. MMP2 and MMP9 activity was observed as clear bands in dark background.
+ Open protocol
+ Expand
9

Investigating Nitric Oxide Modulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cell line with stable overexpression of NOS-3 (4TO-NOS) and its corresponding control cell line (4TO) were obtained and maintained as described elsewhere [14, (link)10] (link). The cell culture medium was supplemented with 2.5 mM L-arginine to ensure the NOS substrate availability. Cells were seeded to a confluence of 150,000 cells/cm 2 , and the measurements were carried out after 48 h. The cell death-inducing agent anti-Fas (Anti-Human Fas or CD95; 0.5 μg/ml. MBL, Nagoya, Japan) was administered 48 h after seeding the cells. Cells were collected 2 h later. The cell-permeable NOS inhibitor N ω -Nitro-L-arginine methyl ester hydrochloride (L-NAME; 5 mM. Sigma-Aldrich, Missouri, USA) and the cathepsin D inhibitor pepstatin A (20 μM or 50 μM; Santa Cruz Biotechnology, California, USA) were added to the culture medium 24 h after seeding the cells.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!