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5 protocols using m per mammalian protein extraction reagent kit

1

Assessing VEGF-C and miRNA Expression in LECs

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One day before viral infection, LECs in logarithmic phase were made into suspension, and the number of viable cells was counted by using trypan blue staining. Cells were collected by 1,000 × g centrifugation and re-suspended in M201 medium (10% FBS) to a concentration of 5 × 105 cells/mL. Cells were seeded on 6-well plates, 2 mL/well, and cultured overnight under normal conditions. One day after seeding, cells were infected with lentiviruses diluted by dPBS at a MOI of 10, and the medium was refreshed after 24 h. The infection efficiency was assessed by fluorescence microscopy 72 h after infection. Total protein was extracted from the cells by an M-PER Mammalian Protein Extraction Reagent Kit (Thermo, CA, USA) and subjected to western blotting to measure the levels of VEGF-C. Total RNA was extracted from the cells by the trizol reagent and subjected to real-time PCR for the levels of miR-128-3p and ASLNC07322.
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2

LPS-Induced Inflammatory Signaling Pathways

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Trizol, Dulbecco's modified Eagle's medium (DMEM), and other cell-culture reagents including fetal bovine serum (FBS) were obtained from Invitrogen-Gibco (Grand Island, NY, USA). Dimethyl sulfoxide (DMSO), phosphate buffered saline (PBS), Lipopolysaccharide, Escherichia coli 0127:138 (LPS), and 3-(4,5-dimethylthiazol-2yl)-2,5-diphenyltetrazolium bromide (MTT) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Anti-NF-κB, anti-JNK, anti-phosphorylated JNK, anti-ERK, anti-phosphorylated ERK, anti-p38, and anti-phosphorylated p38 mouse or rabbit antibodies were purchased from BD Biosciences (San Diego, CA, USA). The polymerase chain reaction (PCR) primers of iNOS, COX-2, IL-1β, IL-6, and β-actin were synthesized by Sangon Biotech Co., Ltd. (Shanghai, China). Reverse transcription and real-time PCR kits were purchased from Bio-Rad Laboratories (Hercules, CA, USA). M-PER Mammalian Protein Extraction Reagent kit and NE-PER Nuclear and Cytoplasmic Extraction kit (Thermo Scientific) were purchased from Thermo Scientific (Waltham, MA, USA).
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3

Assessing IL-17B-induced ERK Activation

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MCF7, BT20 and MDA-MB-468 breast cancer cells were serum-starved for 24 h and then stimulated with rIL-17B (10 ng/mL). Whole protein extracts were prepared using the M-PER Mammalian Protein Extraction Reagent kit (Thermo scientific, Courtaboeuf, France) and analyzed by western blotting using antibodies against phosphorylated ERK1/2 (p-ERK) (1/500), ERK1/2 (ERK) (1/1000) or β-actin (1/10,000) (Cell signaling, Ozyme, Saint Quentin en Yvelynes, France). Signals were revealed using horseradish peroxidase-conjugated secondary antibodies (Jackson ImmunoResearch, Interchim, Montlucon, France) and enhanced chemiluminescence (ECL-Plus, Perkin Elmer, Courtaboeuf, France) according to the manufacturer’s instructions.
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4

Modulation of LPS-induced Inflammatory Signaling

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The experiment was carried out according to the method described by Kim et al. [16 (link)] with modifications. RAW 264.7 cells were seeded in 10 cm cell-culture dishes at a density of 3 × 106 cells per dish and cultured overnight. Cells were then pretreated with CuEO (0.001%, 0.01%) for 1 hour and stimulated with LPS (1 ug/mL) for 30 min. After incubation, the cells were collected and washed twice with cold PBS. Total cellular proteins were extracted by M-PER Mammalian Protein Extraction Reagent kit (Thermo Scientific). Cytoplasmic and nuclear proteins were extracted by using the NE-PER Nuclear and Cytoplasmic Extraction kit (Thermo Scientific). Proteins were then maintained at −80°C for western blot analysis. Protein concentrations in the supernatant fractions were determined using a BCA protein assay (Sigma); then, proteins were applied to sodium dodecyl sulfate-polyacrylamide gel and transferred to polyvinylidene fluoride membranes. After blocking for 60 min in a 5% skim milk solution, membranes were incubated overnight at 4°C with primary antibodies against P-JNK, JNK, p-ERK, ERK, p-p38, p38, and NF-κB p65, followed by horseradish peroxidase-conjugated secondary antibody at room temperature for 1 h. The reactive bands were visualized by enhanced chemiluminescence.
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5

Protein Expression and Analysis by Western Blot

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Cells were disrupted using a M-PER Mammalian Protein Extraction Reagent kit (Thermo SCIENTIFIC) and total proteins were quantified using Bradford Assay. Total proteins (50ug) were used for western-blot analysis, and were loaded onto 10–12% SDS-PAGE (Mini-protean TGX Stain-free gels, BioRad, Hercules, California, USA) with prestained protein standards. Primary antibodies (mTOR, PTP1B, PTEN, TCTP, LC3B, p62, Caspase 3 and β-actin) were purchased from Cell Signaling Technology (Beverly, MA, USA) and anti-core antibody from Enzo Life Science (Postfach, Lausen, Switzerland). Proteins were detected by chemiluminescence, according to manufacturer’s instructions (WesternBright ECL, Advansta, Menlo Park, California, USA). Image analysis and quantification was performed using ChemiDoc MP Imaging System and ChemiDoc XRS+ software (BioRad).
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