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2 protocols using a 966492

1

PARP Inhibitor Characterization Protocol

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Olaparib, AZD-2461, A-966492, niraparib, veliparib, rucaparib, talazoparib, and iniparib were obtained from Selleck and stock solutions (2 mM) were prepared in DMSO. Fluorescent Olaparib (fl-Ola) was obtained from Tocris and a stock solution (10 µM) was prepared in DMSO. The p18mer* DNA oligonucleotides and its complementary strand were obtained from IDT: p18mer: 5′-phosphate-5′-fluorescein-GGGTTGCGGCCGCTTGGG-3′. Nucleosome with overhanging ends of 7 and 11 bp was prepared using the Widom601 sequence as previously described40 (link). Wild-type PARP1 and PARP2 were expressed and purified as previously described41 (link),42 . Purification of HPF1 to homogeneity was performed essentially as previously described25 (link), with the slight modification of using a gradient for the nickel affinity column from 0 to 40% over 15 CV. The stability of HPF1 was evaluated using the Thermo Fisher Protein Thermal Shift kit according to manufacturer’s instructions.
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2

PARP Inhibitor Compounds Evaluation

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The PARP inhibitors used in this study were purchased from Selleckchem (Houston, TX, USA) with the following names and catalog numbers: A-966492 (catalog number S2197), AG14361 (catalog number S2178), AZD2461 (catalog number S7029), E7449 (catalog number S8419), G007-LK (catalog number S7239), Niraparib (MK-4827; catalog number S2741), NMS-P118 (catalog number S8363), NU1025 (catalog number S7730), Olaparib (AZD2281, Ku-0059436; catalog number S1060), PJ34-HCl (catalog number S7300), Rucaparib (AG-014699, PF-01367338; catalog number S1098), Talazoparib (BMN673; catalog number S7048), and UPF1069 (catalog number S8038). Stock solutions were dissolved in dimethyl sulfoxide (DMSO) according to the manufacturer’s protocol to a concentration of 10 mM and stored at −20 °C. Table 1 lists the PARP inhibitors used in this study and their proposed targets.
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