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13 protocols using anti pgc 1α

1

Licorice-Derived Liquiritigenin Apoptosis

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Standard liquiritigenin of purity >98% was purchased from Aladdin Holdings Group Co., Ltd. (Shanghai, China). CP of over 98.5% purity (by HPLC) and the TUNEL kit were purchased from Beyotime Biotechnology (Shanghai, China). Annexin V-FITC/PI double staining apoptosis detection kit were obtained from BestBio (Shanghai, China). The antibodies used for Western blot analysis were as follows: anti-PGC-1α (Mouse, 1:1000, Catalog No.66369-1-Ig), anti-TFAM (Rabbit, 1:1000, Catalog No.22586-1-AP), anti-BCL-2 (Rabbit, 1:1000, Catalog No.26593-1-AP), anti-BAX (Mouse, 1:1000, Catalog No.60267-1-Ig), anti-β-actin (Mouse, 1:6000, Catalog No.66009-1-Ig), purchased from Protein Tech Group (Chicago, IL, USA), and anti-SIRT3 (Rabbit, 1:1000, Catalog No.ab189860), purchased from Abcam (Abcam, Cambridge, UK). Reagents related to cell culture such as culture medium, fetal bovine serum, and streptomycin and penicillin were purchased from Gibco (Shanghai, China).
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2

Quantification of Adipose Protein Expression

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Total proteins were extracted from mouse iWAT and pVAT using a Total Protein Extraction kit (Applygen, Beijing, China), and the protein concentrations were measured with a BCA protein assay reagent kit (Applygen, Beijing, China). Approximately 30 μg of protein was separated on 10% SDS-PAGE gels and transferred onto nitrocellulose membranes (Millipore, Billerica, MA, USA) through a wet transfer (BIO-RAD, California, USA). The membranes were incubated with the primary antibodies (anti-UCP1, Proteintech, Wuhan, China; anti-PGC1α, Proteintech, Wuhan, China; anti-ZAG, Santa Cruz, Dallas, USA; anti-β-actin, CST, Danvers, MA, USA; anti-GAPDH, CST, Danvers, MA, USA) at a 1:100 to 1:1,000 dilution at 4°C overnight, followed by incubation with a goat anti-mouse/rabbit secondary antibody at a 1:5,000 dilution for 1 h (ZSGB-BIO, Beijing, China). The specific protein bands were visualized by enhanced chemiluminescence (Applygen, Beijing, China). The protein bands were quantified by Quantity One software (Version 4.6.9, BIO-RAD, California, USA). The expression levels of target proteins in iWAT were normalized to that of β-actin, and the expression levels in pVAT were normalized to that of GAPDH.
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3

Cardiomyocyte Ultrastructural Analysis

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Fetal bovine serum (FBS) and Dulbecco's Modi ed Eagle's Medium (DMEM) were purchased from Gibco (Oklahoma, USA). Trypsin and collagenase were purchased from Sigma-Aldrich Co. (Saint Louis, MO, USA). Iso and metformin was purchased from Sigma-Aldrich Co. The following primary antibodies were used in this study: anti-Mfn2 and anti-PINK1 (Abcam, Cambridge, United Kingdom), anti-Beclin1, anti-P62, anti-LC3B, anti-PGC 1α, anti-TFAM , anti-NRF1, anti-GAPDH, anti-b-actin (Proteintech ,USA).
Transmission Electron Microscopy (TEM) Cardiomyocytes were xed in 2.5% Glutaraldehyde in cacodylate buffer for 1h at 37°C and then xed for 3h at 4°C. Subsequently,the cells were washed with PBS thrice, then post xed in 1% osmium tetraoxide for 1-2 hours, dehydrated in a graded series of ethanol concentrations, and embedded in Sparr resin.
Ultrathin sections (50-70 nm) were cut with an ultramicrotome (UC7, Leica,Germany), contrast stained with uranyl acetate and lead citrate.Samples were examined and visualized with an electron microscope (JEM-1400, Japan) operated at 80 kV.
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4

Immunoblotting Antibody Protocols

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For immunoblotting, antibodies used in this study were purchased from EMD Millipore (Oakville, Canada), Sigma Aldrich (Oakville, Canada), Proteintech (Illinois, USA), and Cell Signaling Technology (Whitby, Ontario). The following primary antibody was used from EMD Millipore (Oakville, Canada): anti-androgen receptor (Millipore Cat# 06-680, 1:1,000). The following primary antibodies were used from Sigma Aldrich (Oakville, Canada): anti-fast skeletal myosin (M4267, 1:15,000), anti-slow skeletal myosin (Sigma-Aldrich Cat# M8421, 1:10,000), and anti-beta actin (Sigma-Aldrich Cat# A2066, 1:10,000). The following primary antibodies were used from Proteintech (Illinois, USA): anti-PGC1α (Proteintech Cat# 66369-1-Ig, 1:5,000), anti-NRF-2 (Proteintech Cat# 16396-1-AP, 1:500), and anti-TFAM (Proteintech Cat# 22586-1-AP, 1:1,000). The following HRP-conjugated secondary antibodies were used from Cell Signaling Technology (Whitby, Ontario): goat anti-rabbit IgG, HRP-linked (Cell Signaling Technology Cat# 7074, 1:5,000) and horse anti-mouse IgG, HRP-linked (Cell Signaling Technology Cat# 7076, 1:5,000).
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5

PGC-1α Protein Turnover Assay

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C2C12 myoblasts were transfected with NT siRNA or Tet3 siRNA as described above for 48 h, followed by addition of cycloheximide (CHX) (Cell Signaling Technology, MA, USA 2112) at a final concentration of 50 μg/ml. Proteins were isolated at 0, 15, 30 and 45 min later and analysed by western blotting using anti-PGC-1α (dilution 1:1000; Proteintech, IL, USA, 66369-1-Ig) and horseradish peroxide (HRP)-conjugated anti-GAPDH (dilution 1:5000; Proteintech, HRP-60004).
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6

Immunoblotting Analysis of Metabolic Proteins

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The total proteins were extracted from cell samples using RIPA lysate buffer containing PMSF and phosphatase inhibitor. The Pierce BCA protein assay kit (Thermo Fisher Scientific, Germany) was used to quantify proteins. Equal amounts of proteins were separated by SDS-PAGE, using 7% polyacrylamide gels and then transferred onto PVDF membranes (Millipore, USA). The membranes were blocked with 1 × TBS buffer containing 5% BSA and 0.05% Tween 20 for 3 h, incubated with primary antibodies at appropriate dilutions for 2 h and subsequently incubated with peroxidase-conjugated goat-anti-rabbit IgG (1:5000 dilutions) for 1 h. Immunoreactive proteins were visualized by using DAB staining (Beyotime, China). Primary antibodies used in this study included anti-mTOR (7C10), anti-p-mTOR (ser2448) (Cell Signaling Technology, Danvers, MA), anti-SIRT3, anti-GLS1, anti-GDH, anti-IDH2, anti-PGC-1α, anti-α-KGDH (Proteintech, USA), and anti-β-actin (Abcam, USA).
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7

Protein Expression Analysis Protocol

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Tissues and cells were lysed with RIPA buffer containing Halt Protease/Phosphatase inhibitors (Thermo Fisher Scientifics, Pittsburgh, PA). The primary antibodies used in this study were as follows: anti-phospho (Ser563)-HSL (#4139), anti-phospho (Ser660)-HSL (#4126), anti-HSL (#4107), anti-pPKA Substrate (#9621), and anti-phospho (Ser133)-CREB (#9198) (all from Cell Signaling Technology); anti-SLC22A3 antibody (#ab191446), anti-ATP5A (#ab176569), anti-COX7B (#ab140629), anti-UQCRH (#ab134949), anti-UQCRB (#ab190360), and anti-beta Actin (ab8226) (all from Abcam); anti-UCP1 (#GTX112784) (Genetex); and anti-PGC1α (#20658) (Proteintech Group Inc).
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8

Tetramethylpyrazine Enhances Mitochondrial Function

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Male Sprague-Dawley (SD) rats were purchased from Sina-British Sippr/Bk Lab Animal Ltd. (Shanghai, China). Tetramethylpyrazine (TMP), Crocin, Ferulic acid and Chlorogenic acid, acetylcholine, phenylephrine (PE) and D-glucose were purchased from Sigma-Aldrich Co. (St Louis, Missouri, USA). Dulbecco's modified Eagle's medium (DMEM) supplemented with 5.6 mmol/L glucose was obtained from Hclone (Logan, UT, USA). DMEM without red phenol, fetal bovine serum (FBS) and Trizol were purchased from Invitrogen (Carlsbad, CA, USA). CM-H2DCFDA, DAF-FM diacetate and MitoSOX™ Red mitochondrial superoxide indicators were obtained from Invitrogen (Carlsbad, CA, USA). JC-1 indicator was bought from Molecular Probes (Eugene, OR, USA). Antibodies including anti-complex III, anti-PGC-1α, anti-SIRT1 and anti-β-actin were purchased from Proteintech (ProteinTech Group, Chicago, IL, USA). Primers for PGC-1α, NRF-1, TFAM, SIRT1 and 18s were provided by Sangon Biotech CO. Ltd. (Shanghai).
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9

Western Blot Analysis of Hippocampal Proteins

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We collected hippocampal proteins in a radioimmunoprecipitation assay buffer containing phenylmethylsulfonyl fluoride (100:1). Protein concentrations were determined with a bicinchoninic acid assay kit (Solarbo, Beijing, China). Proteins were treated with a sodium dodecyl sulfate- (SDS-) loading buffer after quantitative assessment, subjected to 12% SDS polyacrylamide gel electrophoresis, and then transferred onto polyvinylidene difluoride membranes (5 μl for each sample, 80 V, 100 min). After blocking with 5% dried skim milk for 1 h, the membranes were incubated with anti-SIRT1 (1:2400), anti-PGC-1α (1:2000), anti-NRF1 (1:3000), and anti-β actin (1:10,000) antibodies (Proteintech, Rosemont, IL) at room temperature for 1 h. They were then incubated with IRDye secondary antibodies (1:10,000; ZSGB-BIO, Beijing, China) for 1 h at room temperature. After the membranes were washed five times with tris-buffered saline-Tween 20 for 25 min, an ECL Prime western blotting detection reagent (GE Healthcare, Chicago, IL) was used to expose protein bands. Protein bands were visualised with a FluorChem M gel image analysis system (Alpha Innotech).
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10

Western Blot Analysis of Muscle Proteins

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Gastrocnemius muscle tissues or C2C12 myotubes were lysed in RIPA enhancer buffer (Beyotime, Shanghai, China, P0013B) and supplemented with protease inhibitor cocktail (Beyotime, Shanghai, China, P1005, 1:100). The lysates/proteins were loaded at 20 μg per lane, after electrophoresis and transfer, the PVDF membrane was incubated with primary antibody, the following primary antibodies: anti-HIF-α (CST, Danvers, MA, USA, #36169, 1:1000), anti-FNDC5 (Abcam, Waltham, MA, USA, ab174833; 1:2000), anti-β-tubulin (Abcam, Waltham, MA, USA, ab6046, 1:2000), anti-GAPDH (Abcam, Waltham, MA, USA, ab8245, 1:1000) and anti-PGC-1α (Proteintech, Wuhan, China20658-1-AP, 1:2000) were incubated overnight at 4 ℃. The HRP-coupled secondary antibody (Immunoway, Jiangsu, China, RS0001, 1:10,000) was incubated for 1 h at room temperature (RT). Protein bands were displayed via clarityTM western ECL substrate (BIO-RAD, Hercules, CA, USA #170-5060) by using Chemiluminescence Apparatus (Tanon, Shanghai, China, T5200).
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