The largest database of trusted experimental protocols

16 protocols using celltrackertm cm dii

1

In Vivo Fluorescent Tumor Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
ACC cells (1.25 × 106 cells) were labelled with the vital red fluorescent dye CellTrackerTM CM-DiI (final concentration 0.66 ng/mL; Thermo Fisher Scientific, Milan, Italy), and resuspended in 25 µL of PBS for microinjections. Tumor xenograft was performed as previously described20 (link). Drugs or solvents were directly added to the PTU-fish water and after 3 days of treatment (T3), pictures were taken. The tumour areas of vehicle- and drug-treated groups at T0 and T3 were analysed with Axio Zoom Fluorescent Microscope (Carl Zeiss AG, Oberkochen, Germany) and measured with Noldus DanioScopeTM software (Noldus information Technology). Data obtained were analysed by GraphPad Prism software version 6.01.
+ Open protocol
+ Expand
2

Tracking hMSC Fate in Kidney Injury

Check if the same lab product or an alternative is used in the 5 most similar protocols
To track the fate of hMSCs in vivo, hMSCs were stained with chloromethylbenzamido (CM)-DiI (CellTrackerTM CM-DiI, C7000, Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s instructions. Staining efficacy was >98%. Stained hMSCs were injected via the renal artery following IRI as described above. As shown in Figure 1C, rats were sacrificed on days 1, 3, 7, 21, and 42 post-IRI. Kidney, lung, and spleen samples were harvested, fixed in 10% formaldehyde, and processed in paraffin. Stained hMSCs were also injected via the inferior vena cava following IRI, and samples were collected on days 1 and 3, fixed in 10% formaldehyde, and processed in paraffin. Harvested tissue samples were sectioned (4-µm), and staining was detected using a fluorescence microscope (KEYENCE, Osaka, Japan). The number of CM-DiI-stained hMSCs was counted in 10 random fields (×200, n = 5).
+ Open protocol
+ Expand
3

Tracking Transplanted HepaRG Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The HepaRG cells were incubated with CellTrackerTM CM-DiI (Thermo Fisher Scientific) diluted in culture media for 24 hours and then used for transplantation. Animals were euthanized three, seven, and 14 days after the HepaRG transplantation. The spleen was subsequently removed and fixed in 4% PFA solution (Biosesang, Gyeonggi-do, Korea) for 4-24 hours at room temperature. After the incubation with 30% sucrose solution until sink to the bottom, the tissue was transferred to the mold filled with OCT compound (Sakura Finetek, CA, USA). The OCT-embedded tissue was frozen, sectioned in 7 µm thickness using cryostat (Leica Microsystems, Germany), and mounted on slide glass (O. Kindler, GmbH, Germany). The tissue was fixed in cold acetone for 20 minutes, washed with PBS, and stained with DAPI solution (Sigma-Aldrich, MO, USA) to confirm the transplantation.
+ Open protocol
+ Expand
4

Tumor-Induced Angiogenesis in Zebrafish Embryos

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fish of the strain Tg(fli1a:EGFP)y1 were raised and maintained according to the National (Italian D.lgs 26/2014) and European (2010/63/EU and 2012/707/EU) animal guidelines. Embryos were collected by natural spawning and staged according to Kimmel and colleagues (Kimmel et al, 1995 (link)). GH3 cells, infected with unspecific shRNA (shCtrl) or with shAngpt2 were labeled with a viable red fluorescent dye (CellTrack‐erTM CM‐DiI, Invitrogen), resuspended in PBS and implanted into the sub‐peridermal space of embryos at 48 h postfertilization. At 24 and 48 h post‐injection, embryos were imaged through a fluorescence stereomicroscope (Leica DM6000B equipped with LAS Leica imaging software). In some pictures, the red channel was omitted to highlight the differences of tumor‐induced microvascular networks between the two experimental groups. Digital magnifications of graft regions are provided and all images shown are oriented so that rostral is to the left and dorsal is at the top. The same exposure time was used for all panels. At least 20 correctly grafted embryos have been included in each experimental group. As arbitrary unit (A.U.) of the tumor‐induced angiogenesis, the total cumulative length of endothelial structures sprouting from the SIV and CCV was measured in each grafted embryo by Fiji software and expressed in number of pixels.
+ Open protocol
+ Expand
5

Labeling and Uptake of ASC-Derived Nanovesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Artificial nanovesicles (100 μg) from ASCs were labeled with 1 μM of CellTracker TM CM-DiI (Invitrogen, Life Technologies) for 5 min at 37 °C and then for an additional 15 min at 4 °C. After incubation, the labeled ASC-derived artificial nanovesicles were washed with PBS alternating with ultracentrifugation (100 000 g force, 1 h). MLE-12 cells (3 × 104) were seeded overnight in a 35 mm tissue culture dish or a 27 mm collagen coated tissue culture dish (Nunc). On the next day, cells were pretreated for 30 min with LY294002 (1 μM), cytochalasin D (0.2 μM), chloropromazine (1 μg ml−1), or heparin (10 μg ml−1) (all from Sigma, USA). Then, 10 μg ml−1 of DiI-labeled artificial nanovesicles from ASCs were added to the MLE-12 cells for 2 h, and the cells were counterstained with Hoechst 33258 (Thermo Fisher Scientific). Cells were observed under confocal microscopy (Carl Zeiss, Weimar, Germany), and microscopic images were obtained.
+ Open protocol
+ Expand
6

Tracking hCSCs with CellTracker CM-DiI

Check if the same lab product or an alternative is used in the 5 most similar protocols
hCSCs were labeled for tracking with CellTrackerTM CM-DiI (Invitrogen #C7000). For the labeling process, we suspended the cells at 1 × 106 cells/mL in DPBS and added DiI at 1 µM/mL. After incubation for 5 min at 37 °C and then 15 min at 37 °C, the cells were centrifuged at 1500 rpm for 5 min and washed twice with DPBS. To prepare cells for transplantation, DiI-labeled hCSCs (1 × 106) were suspended in 100 μL of saline.
+ Open protocol
+ Expand
7

Evaluating EV Biodistribution in TMEV Model

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the evaluation of EV biodistribution at 2 hours after intravenous administration, an additional six animals were used, which were divided into two groups: sham group (n = 3) and TMEV-EVs (n = 3). TAPA1 marker levels (CD81) (1:750, Abcam) were observed in the brain as well as in samples from the peripheral organs, such as the lungs, spleen and liver. A colabelling of EVs (CD63) with glial fibrillary acid protein (GFAP) (1:400, Millipore) and neuronal specific nuclear protein (NeuN) (1:100, Millipore) was made by immunofluorescence. The EV phenotype was determined by immunofluorescence with a specific lipophilic tracer, CellTrackerTM CM-DiI (Invitrogen, Carlsbad, CA, USA), and then colabelled with ALIX (1:250, Abcam). Images were acquired as a maximum confocal projection using a LEICA TCS SPE spectral confocal microscope (Leica Microsystems, Heidelberg, Germany) and analysed using LAS AF software (Leica). Mean fluorescence intensity was measured by the NIS-Element AR (Nikon) 4.5 Program.
+ Open protocol
+ Expand
8

Macrophage Integration in Lung Organoids

Check if the same lab product or an alternative is used in the 5 most similar protocols
On day 30 of lung organoid differentiation, hPSC-derived macrophages were stained with CellTrackerTM CM-DiI (C7000, Invitrogen, Waltham, MA, USA). Live staining was performed according to the manufacturer’s instructions. The macrophages were then injected into the lung organoid at a concentration of 2.0 × 107 cells/mL using a 0.3 mL insulin syringe. Fluorescence was continuously observed after the injection on day 45 for organoid differentiation. During the macrophage injection stage, the cell-cultured medium used a “lung organoid medium”.
+ Open protocol
+ Expand
9

Quantifying HUVEC-EPC Adhesion Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
2 × 105 human umbilical vein endothelial cells (HUVECs) were seeded in each well of a four-well plate 48 h before the assay to prepare a monolayer of ECs. Then, 1 × 105 EPCs labelled with CM-DiI (CellTrackerTM CM-DiI, Invitrogen) were added to each well and incubated for 3 h at 37°C. Nonattached cells were gently washed and removed with PBS, and adherent EPCs were fixed with 4% paraformaldehyde and counted by independent investigators blinded to treatment randomly.
+ Open protocol
+ Expand
10

Assessing HUVEC-EPC Adhesion

Check if the same lab product or an alternative is used in the 5 most similar protocols
A monolayer of Human umbilical vein endothelial cells (HUVECs) was prepared 48h prior the assay by plating 2×10 5 cells in each well of a six-well plate (Corning 3516). HUVECs were pretreated with or without 1 ng/mL fibronectin (Peprotech Inc, Rocky Hill, NJ, USA) for 12 h. Then, 1×10 5 CM-DiI (CellTracker TM CM-DiI; Invitrogen)-labeled EPCs were added to each well and incubated for 3 h at 37℃. Nonattached cells were gently removed by PBS, and adherent EPCs were fixed with 4% paraformaldehyde and counted by independent investigators.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!