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4 protocols using lab tek 2 chambered cover slides

1

HEK-293-T Cell Adhesion and Transfection

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Labteks were coated with poly-D-lysine (Sigma-Aldrich, #P6407, 0.5 mg/ml) for 1 h at room temperature for adherence of HEK-293-T cells; 1 × 105 HEK-293-T cells were seeded at least 4 h before transfection on four-well Lab-Tek II chambered cover slides (Nunc, cat. no. 155409) and cultured at a 5% CO2 atmosphere at 37°C.
HEK-293-T cells (German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany; #ACC635) were maintained in T25-culture flasks (Thermo Fisher, Cat. Nr. 156340) in Dulbecco’s Modified Eagle’s Medium (DMEM, Sigma-Aldrich, #D5796) supplemented with 10% FCS (Sigma-Aldrich, #F7524), and 1% Pen-Strep (Sigma-Aldrich, #P4333).
All experiments with primary neuronal cultures carried out in accordance with the guidelines established by the European Communities Council (Directive 2010/63/EU of September 22, 2010) were permitted by the Italian Ministry of Health and followed the rules approved by the Italian Institute of Technology. Primary cultures of hippocampal neurons were prepared from P0-P1 C57BL/6J mice as previously published (Polenghi et al., 2020 (link)). Neurons were plated at a density of 70 × 103 cells/cm2 on poly-D-lysine pre-coated coverslips and kept in Neurobasal-A medium (Thermo Fisher, Italy) supplemented with B-27 (Thermo Fisher, Italy) 2%, Glutamax 1% (Thermo Fisher, Italy), and gentamycin 5 mg/ml (Sigma) at 37°C in 7.4% CO2.
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2

Preparation of Biotin-Functionalized GUVs

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GUVs were prepared under physiological salt conditions (20 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid [HEPES], pH 7.5, 150 mM KCl) using a modified electroformation protocol and laboratory-built platinum wire electrode chambers as described previously (Montes et al., 2007 (link)). The lipid mixture contained, in addition to DOPC (∼75 mol%), 5 mol% PIP2, 20 mol% 1,2-dioleoyl-sn-glycero-3-phospho-l-serine (DOPS), 0.1 mol% RhPE for fluorescence imaging, and 0.5 mol% biotin-PE for GUV adhesion to streptavidin (Sigma-Aldrich, St. Louis, MO)–coupled, biotin-LC-BSA (Thermo Scientific, Rockford, IL)–coated LabTek II chambered cover slides (Nalge Nunc International, Rochester, NY) prepared according to published protocols (Yildiz et al., 2003 (link)). Confocal images were captured using a 60× oil-immersion objective and an Olympus FV1000 IX81 confocal microscope (Olympus USA, Melville, NY).
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3

Cell Culture Conditions for HeLa and COS-7

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HeLa cells and COS-7 cells were cultured at 37 °C and 5% CO2 using DMEM high glucose with pyruvate (4.5 g l−1 glucose, with GlutaMAXTM supplement) supplemented with 10% fetal bovine serum and 1 × penicillin–streptomycin (all gibco®, ThermoFisher Scientific) or DMEM high glucose w/o phenol red (4.5 g l−1 glucose) supplemented with 4 mM l-gluthamine, 10% fetal bovine serum and 1 × penicillin–streptomycin (all gibco®, ThermoFisher Scientific). HeLa cells were from ATCC (ATCC® CCL-2™) and COS-7 cells were a kind gift of the Manley lab (LEB, EPFL).
Cells were seeded in Lab-tek® II chambered cover slides (nunc) 1–2 days before fixation in DMEM high glucose w/o phenol red (4.5 g l−1 glucose) supplemented with 4 mM l-gluthamine, 10% fetal bovine serum and 1 × penicillin–streptomycin (all gibco®, ThermoFisher Scientific).
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4

Immunofluorescence Staining of Tubulin in COS-7 Cells

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Fixed COS-7 cells were prepared as described in 19 (link) . Primary anti-tubulin antibody (clone B-5-1-2 ascites fluid, Sigma-Aldrich) was used at 1:100-1:200 dilution, secondary donkey anti-mouse-AbberiorFlip565
(preparation see below) was used at 1:100-1:200 dilution.
COS-7 cells were cultured at 37 °C and 5 % CO2 using DMEM high glucose w/o phenol red (4.5 g l -1 glucose) supplemented with 4 mM L-gluthamine, 10 % fetal bovine serum and 1× penicillin-streptomycin (all gibco ® , Thermo Fisher Scientific). Cells were seeded in Lab-tek ® II chambered cover slides (nunc) or on 18 mm high-precision No. 1.5 borosilicate coverslips (Marienfeld) in 12 well plates (Thermo Fisher Scientific)
1-2 days before fixation in DMEM high glucose w/o phenol red (see above).
The fixation and labelling protocol is similar as described by Chazeau et al. 24 (link)
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