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5 protocols using cd9 20597 1 ap

1

Investigating Renal Tubular Epithelial Cell Protection

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C57BL/6 male mice (20–25 g, 8–10 wk old) were provided by the Animal Experiment Central at Chongqing Medical University (Chongqing, China). The ethical approval number of our institute is:2022-k276. HucMSCs were obtained from the Zhong Qiao Xin Zhou Biotechnology Co., Ltd. (Shanghai, China), and the human renal tubular epithelial cell line HK-2 was purchased from the Procell Life Science&Technology Co., Ltd. (Wuhan, China). antimycin A was purchased from Maokang Biotechnology Co., Ltd. (Shanghai, China), 2-Deoxy-D-glucose was purchased from Sigma Aldrich (St. Louis, MO, USA), Fetal bovine serum (FBS), PKH26, and PKH67 were purchased from Millipore Sigma (Burlington, MA, USA). The pAb anti-cleaved caspase-3 (9664S), Bcl-2 (3498), GRP78 (3177), IRE1-α (3294), XBP-1S (83418), CHOP (2895), p-PERK (3179), ATF6 (65880), and β-actin (3700) were obtained from Cell Signaling Technology (Danvers, MA, USA). The pAb anti-PDK4 (YN5701) was obtained from ImmunoWay Biotechnology Company (Plano, TX, USA). The pAb anti-TSG101 (28283-1-AP) and CD9 (20597-1-AP) were obtained from Proteintech Group, Inc. (Wuhan, China). The mimic miRNAs, inhibitor miRNAs, and small interfering RNAs (siRNAs) were purchased from Tsingke (Beijing, China). Lipofectamine 2000 was purchased from Thermo Fisher Scientific (Waltham, MA, USA).
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2

Western Blot Analysis of EMT Markers

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Exosomes or cells were lysed with RIPA buffer containing a complete protease inhibitor tablet (Roche, Switzerland). Lysate was separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis, and the gel was blotted onto polyvinylidene fluoride (PVDF) membrane (Millipore, USA). The membrane was blocked in 5% nonfatmilk, and then incubated with either rabbit anti-human E-cadherin (3195, Cell Signaling Technologies, USA), N-cadherin (14,215, Cell Signaling Technologies, USA), Vimentin (5741, Cell Signaling Technologies), Twist (ab49254, Abcam, USA), PTEN (ab32199, Abcam, USA), CD103 (GTX64393, Genetex, USA), CD9 (20597–1-AP; Proteintech, USA), or Actin (3700, Cell Signaling Technology, USA). After washing, the membrane was incubated with the fluorescence-conjugated anti-mouse or anti-rabbit IgG (Invitrogen, USA). The bound secondary antibody was quantified using the Odyssey v1.2 software (LI-COR, USA) by measuring the band intensity (area × optical density) for each group and then normalized with Actin. The final results are expressed as fold changes by normalizing the data to control values.
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3

Isolation and Characterization of Exosomes

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Exosomes were isolated by ultracentrifugation. Brie y, the conditioned supernatants of MSCs pretreated with or without TSA were collected and centrifuged at 300 ×g for 10 min. The supernatant was centrifuged at 10000 ×g for 30 min and ltered through a sterile 0.22-μm pore lter. The ltered solution was ultracentrifuged at 120,000 ×g for 2 h. Lastly, the supernatant was discarded to obtain the exosome precipitate [25, 26] . The structure of exosomes was observed by transmission electron microscopy (TEM) analysis using a Hitachi HT7700 (Hitachi, Japan) and their size distribution was determined by dynamic light scattering (DLS) using a DynaPro NanoStar (WYATT, USA). The exosomes were identi ed using western blotting with the marker proteins CD9 (20597-1-AP; Proteintech, Chicago, USA), CD63 (25682-1-AP; Proteintech), and Alix (12422-1-AP; Proteintech). The protein concentration in exosomes was determined using the bicinchoninic acid kit (Thermo Fisher Scienti c, Waltham, MA, USA).
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Exosomal Marker and Signaling Pathway Detection

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5× loading buffer was added to the solution in a 4:1 ratio and denatured at 100°C for 5 min. SDS-PAGE was electrophoresed at 75 V for 130 min and then transferred to the membrane at 300 mA for 1 h. After 5 min of TBST rinsing, 5% skimmed milk was blocked for 1.5 hours, TBST was rinsed for 15 min, and CD63(25682-1-AP, 1:300, proteintech, USA), CD81 (66866-1-Ig, 1:3000, proteintech, USA), CD9 (20597-1-AP, 1:300, proteintech, USA), GAPDH(60004-1-Ig, 1:5000, proteintech, USA), PI3K (67071-1-Ig, 1:5000, proteintech, USA), p-Akt(66444-1-Ig, 1:5000, proteintech, USA), Ang-1 (ab183701, 1:10000, abcam, UK), Tie-2(19157-1-AP, 1:500, proteintech, USA), and b-actin (60008-1-Ig, 1:5000, proteintech, USA) primary antibodies were added and incubated overnight at 4°C. The PVDF membrane was taken out and rinsed with TBST. The secondary antibody HRP goat anti-mouse IgG (SA00001-1, 1:5000, Proteintech, USA) or HRP goat anti-rabbit IgG (SA00001-2, 1:6000, Proteintech, USA) was added, incubated at 25°C for 1.5 h, and rinsed with TBST. The Western strip image was scanned and analysed by a chemiluminescence imaging system (Guangzhou Qinxiang Company). GAPDH or b-actin was used as an internal control.
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5

Isolation and Characterization of Exosomes

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Exosomes were isolated by ultracentrifugation. Brie y, the conditioned supernatants of MSCs pretreated with or without TSA were collected and centrifuged at 300 ×g for 10 min. The supernatant was centrifuged at 10000 ×g for 30 min and ltered through a sterile 0.22-μm pore lter. The ltered solution was ultracentrifuged at 120,000 ×g for 2 h. Lastly, the supernatant was discarded to obtain the exosome precipitate [25, 26] . The structure of exosomes was observed by transmission electron microscopy (TEM) analysis using a Hitachi HT7700 (Hitachi, Japan) and their size distribution was determined by dynamic light scattering (DLS) using a DynaPro NanoStar (WYATT, USA). The exosomes were identi ed using western blotting with the marker proteins CD9 (20597-1-AP; Proteintech, Chicago, USA), CD63 (25682-1-AP; Proteintech), and Alix (12422-1-AP; Proteintech). The protein concentration in exosomes was determined using the bicinchoninic acid kit (Thermo Fisher Scienti c, Waltham, MA, USA).
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