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8 protocols using hitrap cm ff column

1

Murine LECT2 Protein Purification

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Murine LECT2 was prepared as previously described31 (link). Briefly, murine LECT2 was expressed in Expi293 cells (Thermo Fisher Scientific, Waltham, MA, USA) in accordance with the manufacturer’s protocol. The cells were grown for 5–7 days after transfection, and the cell culture supernatant was diluted in 20 mmol/L phosphate buffer without sodium chloride, and potassium chloride, pH 7.2 (buffer A) and loaded onto a HiTrap CM FF column (GE Healthcare Bioscience, Piscataway, NJ, USA) equilibrated with buffer A. After the column was washed with buffer A, the protein was eluted with a linear gradient of 0–1 mol/L sodium chloride. The purified LECT2 was concentrated using VivaSpin (GE Healthcare). To determine the protein concentration, absorbance at 280 nm was measured.
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2

Purification and Characterization of Venom Phospholipase A2

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D. siamensis venom was dissolved in buffer A (50 mM phosphate pH 6.0) and centrifugated at 10,000 rpm for 5 min. The supernatant was loaded onto a HiTrap CM FF column (GE Healthcare, Uppsala, Sweden). The column was equilibrated with 5 volumes of buffer A and elution was carried out with an increasing linear gradient of 0–1 M NaCl in buffer A at a flow rate of 0.5 mL/min for 15 column volumes. Absorbance of the elution was monitored at 280 nm and the eluted fractions were collected using an AKTA pure Fast Protein Liquid Chromatography system (GE Healthcare, Uppsala, Sweeden). Four peaks were obtained from the elution chromatogram and each peak was tested for PLA2 activity using the Holzer and Mackessy method [21 (link),41 (link)]. Peaks with PLA2 activity were pooled and further fractionated using a SuperdexTM 75 10/300GL column (GE Healthcare, Uppsala, Sweden) mounted on a AKTA pure Fast Protein Liquid Chromatography system (GE Healthcare, Uppsala, Sweden). The fraction was eluted using 10 mM PBS, pH 7.4, at room temperature. The flow rate was set at 0.5 mL/min and 1 mL fraction was collected in each tube and elution was run for 50 min. The eluted proteins were detected by absorbance at 280 nm.
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3

Purification of Human Alpha-1-Acid Glycoprotein

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Human AGP was purified as previously described24 (link),26 (link). Briefly, human plasma fraction V supernatant provided by KM Biologics Co., Ltd. (Kumamoto, Japan) was mixed with 10 mM acetate buffer and passed through a HiTrap CM FFcolumn (5 mL) and a HiTrap Q FF column (5 mL) on an AKTAprime Plus System (GE Healthcare, Tokyo, Japan). AGP was eluted with an acetate buffer containing 0.5 M NaCl and dialyzed against deionized water at 4 °C.
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4

Venomous Protein Isolation from RVV

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The venom compositions of RVV were isolated for phospholipase A2(PLA2) and metalloproteinase (MP) as the dominant protein
families, and L-amino acid oxidase (LAAO) and phosphodiesterase (PDE) as minor
protein families, as previously described [19 (link)]. Briefly, crude RVV was divided for isolation through
fractionation methods. One hundred milligrams of pool-crude RVV were used to
obtain phospholipase A2 (PLA2), resulting in a protein
yield of 7.6 mg. Another 100 mg of pool-crude RVV was isolated using
fractionation methods for metalloprotease (MP), L-amino acid oxidase (LAAO), and
phosphodiesterase (PDE), yielding 4.8 mg, 0.7 mg, and 0.32 mg of protein,
respectively, for comparative purposes. The enzymatic activities of crude RVV
venoms were measured as previously described [19 (link)].
To isolate PLA2 from crude RVV, ion-exchange chromatography was
performed on a HiTrap CMFF column (GE Healthcare, Sweden). PLA2activity was assessed according to the method of Holzer and Mackessy [20 (link)]. The isolation of MP, PDE, and LAAO was
achieved through gel filtration on SuperdexTM 75 10/300GL and column
ion-exchange chromatography. The proteolytic activity and inhibitor assay for MP
were determined using the method described by Anson [21 (link)]. LAAO activity was determined according to the
Worthington Enzyme Manual [22 ]. PDE
activity was measured according to Lo et al. [23 ].
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5

Murine LECT2 Protein Purification

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A cDNA sequence encoding murine Lect2 was amplified by polymerase chain reaction. The amplified fragments were cloned in-frame into the EcoRI/XhoI site of the pCMV-Myc-C vector (Clontech, Mountain View, CA, USA), in which a c-Myc tag was introduced at the C-terminus.
Murine LECT2 was expressed in Expi293 cells (Thermo Fisher Scientific, Waltham, MA, USA) in accordance with the manufacturer’s protocol. The cells were grown for 5–7 days after transfection, and the cell culture supernatant was diluted in 20 mmol/L phosphate buffer without sodium chloride and potassium chloride, pH 7.2 (buffer A) and loaded onto a HiTrap CM FF column (GE Healthcare Bioscience, Piscataway, NJ, USA) equilibrated with buffer A. After the column was washed with buffer A, the protein was eluted with a linear gradient of 0–1 mol/L sodium chloride. Next, the eluted protein was loaded onto a c-Myc-tagged protein purification cartridge (MBL International, Woburn, MA, USA) equilibrated with PBS (Wako Chemicals, Tokyo, Japan). The cartridge was washed with PBS, followed by elution with 0.5 mg/mL c-Myc tag peptide in PBS. The purified LECT2 was concentrated using VivaSpin (GE Healthcare). To determine the protein concentration, absorbance at 280 nm was measured (1 absorption unit at 280 nm = 1 mg/mL for this study). The mass spectra were measured using Ultraflex III (Bruker Daltonics, Billerica, MA, USA).
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6

Isolation of DC Maturation Factors

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To isolate the DC maturation factors, protein samples were applied to an AKTA Explorer 100 FPLC system (GE Healthcare, Piscataway, NJ, USA). Briefly, 30 ml anti-CD3 Ab-activated supernatant from NKT cells was applied to a HiTrap diethylaminoethanol fast flow (DEAE FF) column (5 ml, GE Healthcare), and the DC maturation factors were eluted with 20 mM Tris-Cl (pH 8.0) containing 1 M NaCl. From each collection tube, 50 μl of supernatant was used to test the allogeneic immature DC maturation effect. Samples that showed a DC maturation effect were concentrated by dialysis with 20 mM Tris-Cl buffer at 4°C overnight after freeze-drying. The active region was again loaded to a HiTrap CM FF column (5 ml, GE Healthcare) and corrected by DEAE anion column chromatography. Active regions that were prepared for cation chromatography [27 (link)] were reloaded onto a HiTrap Blue HP (1 ml, GE Healthcare) and finally eluted with 1.5 M KCl (pH 7.0) containing 50 mM KH2PO4. The protein contents of the final active regions were analyzed by mass spectrometry (MS).
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7

PEGylation and Purification of rhG-CSF

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PEGylated rhG-CSF was prepared as control, referring to a previously reported method (Veronese et al., 2007 (link)). Briefly, rhG-CSF was dissolved in 0.05 M sodium phosphate buffer, pH 7.2, containing 4 M guanidinium chloride (Gu HCl). And, 10 kDa PEG-MAL was added at a mole ratio of PEG-MAL to rhG-CSF of 5:1. The solution was incubated at 30°C for 2 h. Before purification, the reaction mixture was dialyzed with buffer A (10 mM acetate buffers, pH 4.2), and then concentrated using Amicon Ultra-15 centrifugal filter devices with a 3 kDa MW cut-off (Millipore Corp. Bedford, MA, United States). Subsequently, the treated reaction mixture of 2 ml was loaded on a 5 ml HiTrap CM FF column (GE Healthcare, United States) pre-equilibrated with buffer A, using an AKTA purifier 10 system (GE Healthcare, United States) at room temperature. After the column was washed with three column volumes of the buffer A, PEGylated rhG-CSF fractions were eluted with a linear salt gradient from 0 to 50% buffer B (10 mM acetate buffer containing 1 M NaCl, pH 4.2) over 120 min, at a flow rate of 1 ml/min with UV detection at 280 nm. The collected fraction of purified PEG10k-rhG-CSF was dialyzed with buffer A, and then concentrated using Amicon Ultra-15 centrifugal filter devices with a 3 kDa MW cut-off (Millipore Corp. Bedford, MA, United States), and stored at −20°C until use.
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8

Purification of Phospholipase A2 from Crude Venom

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Crude RVV (100 mg) was dissolved in buffer A (50 mM phosphate buffer pH 6.0). After centrifugation at 7826 g for 5 min, the supernatant was applied to ion-exchange chromatography on HiTrap CMFF column (GE Healthcare, Sweden). The column was washed with five volumes of buffer A and elution was performed with an increasing linear concentration gradient of NaCl from 0 to 1 M in buffer An at a flow rate of 0.5 ml/min. Fractions of 1 ml were collected and measured at an absorbance of 280 nm (A280) under an AKTA pure Fast Protein Liquid Chromatography system (FPLC, GE Healthcare, Sweden). Four peaks were observed and determined for PLA2 activity. Fractions containing PLA2 activity were pooled (21.2 mg protein) and further enriched by size exclusion chromatography in a pre-equilibrated Superdex™ 75 10/300 GL column (GE Healthcare, Sweden). Elution was performed with 10 mM phosphate buffered saline pH 7.4 at room temperature. The flow rate was adjusted to 0.5 ml/min, and 1 ml fractions were collected in each tube. The protein elution and concentration was determined by A280 under a Unicorn 6.3 Software.
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