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Anti α tubulin

Manufactured by Merck Group
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Anti-α-tubulin is a laboratory reagent used in the detection and quantification of the α-tubulin protein, a crucial component of the cytoskeleton in eukaryotic cells. It is a highly specific antibody that binds to the α-tubulin subunit, allowing for the visualization and analysis of microtubule structures within cells.

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920 protocols using anti α tubulin

1

Protein Extraction and Western Blot Analysis

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Frozen hearts, livers and kidneys were homogenized in modified RIPA buffer containing 50 mM Tris/HCl, 150 mM NaCl, 1% Triton X-100, 0.5% sodium deoxychoilate, 0.1% SDS, 1 mM EDTA, 10 mM sodium fluoride, Protease inhibitor cocktail (Roche Life Sciences, Mannheim, Germany) and Phosphatase inhibitor cocktail 2 and 3 (Sigma-Aldrich, Taufkirchen, Germany), pH 7.5 using an Ultra-Turrax T10 basic homogenizer. Samples were separated by 10% SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membranes at 250 mA for 2 h and incubated with the following primary antibodies: anti-insulin receptor (1:1000, Cell Signaling Technologies, 3025), anti-NRF1 (1:2000, Abcam, ab175932). Anti-Rabbit IgG (H+L) Fab2 Alexa Fluor (1:5000; Cell Signaling, 4414) and anti-Mouse IgG (H+L) Fab2 Alexa Fluor (1:10000; Cell Signaling, 4408) served as secondary antibody. Detection and quantification of fluorescent bands was performed using the Bio-Rad Western Blot Imager. Loading control was performed using anti-alpha-tubulin (1:2000, Sigma-Aldrich, T9026). For blots investigating levels of MTHFD1L, ATP synthase β and alpha-tubulin performed using isolated mitochondria, the following primary antibodies were used: Anti-MTHFD1L (1:1000, Novus Biologicals NBP2-37864), anti-ATP synthase β (1:2000, BD Biosciences, 612519), anti-alpha-tubulin (1:2000, Sigma-Aldrich, T9026).
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2

Immunofluorescence and Western Blotting Protocols

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Antibodies against Cep192 (1–211 aa; used at 0.5 µg/ml for immunofluorescence), SAS6 (501–657 aa; used at 0.5 µg/ml for immunofluorescence), and PLK4 (814–970 aa; used at 0.5 µg/ml for immunofluorescence) were used as previously described (Meitinger et al., 2016 (link)). The following antibodies were purchased from commercial sources, with their working concentrations indicated in parentheses: anti-CDK5RAP2 (1:1,000 for immunofluorescence in Fig. 7, A and C; ab86340; Abcam) anti-CDK5RAP2 (1:1,000 for immunofluorescence in Fig. 1, A and D, and Western blotting in Figs. 2F, 6 F and S5 C; 06–1398; Millipore), anti-CDK5RAP2 (1:500 for Western blotting in Fig. 1 A, Fig. 5 C, Fig. 6 B, and Fig. 7 B; A300-554A; Bethyl Laboratories, Inc.), anti-CEP152 (1:1,000; Abcam), anti-PCNT (1:2,000 for immunofluorescence, 1:500 for immunoblotting; ab4448; Abcam), GTU-88 (anti–γ-tubulin; 1:1,000; Sigma-Aldrich), DM1A (anti–α-tubulin; 1:5,000; Sigma-Aldrich), YOL1/34 (anti–α-tubulin; 1:500; Millipore), anti-GFP (1:500; 598; Medical and Biological Laboratories), and anti-Centrin1 (1:1,000; 20H5; Millipore). Antigens for anti-CDK5RAP2 and anti-PCNT antibodies are indicated in Fig. S1. Secondary antibodies were purchased from Jackson ImmunoResearch Laboratories and GE Healthcare.
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3

Chelidonine Induces Apoptosis Regulation

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Chelidonine purchased from Sigma-Aldrich was used in this study. To inhibit apoptosis, the pan-caspase inhibitor Z-VAD-FMK (Enzo Life Sciences, Farmingdale, NY, USA) was used and dimethyl sulfoxide (DMSO) (Sigma-Aldrich) was used as a vehicle. For western blot analysis, the following antibodies were used: anticaspase-3, caspase-9, poly (ADP-ribose) polymerase (PARP), Mcl-1, BAK, p-CDK1(Thr161), aurora A and p-PLK1 from Cell Signaling Technology (Beverly, MA, USA); anticyclin B1, CDK1, p-CDK1(Tyr15), and PLK1 from Santa Cruz Biotechnology (CA, USA); anti-BAX from BD Biosciences; anti-p-Ser/Thr-MPM-2 from Millipore; and anti-α-tubulin from Sigma-Aldrich. Anti-mouse IgG peroxidase conjugate and anti-rabbit IgG peroxidase conjugate from Sigma-Aldrich were used as secondary antibodies. For immunofluorescence assay, the following primary antibodies were used: anti-AIF from Santa Cruz, anti-α-tubulin from Sigma-Aldrich, and antipericentrin from abcam (Cambridge, MA, USA), and anti-mouse-FITC and anti-mouse-TRITC antibody were purchased from Sigma-Aldrich. To stain nucleus, we used DAPI from Sigma-Aldrich.
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4

Investigating SIRT6-Mediated Immune Regulation

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All general reagents and chemicals were purchased from Sigma–Aldrich, unless otherwise specified. Supplements and media for cell culture were from Invitrogen. Antibodies were purchased from Cell Signaling Technology (anti-Sirt6, catalog no.: 12486; anti-p27, catalog no.: 3688; anti–histone H3, catalog no.: 4620; and antiubiquitin, catalog no.: 3936), Abcam (anti-TNFα, catalog no.: ab183218 and anti-Sirt6, catalog no.: ab191385), or Sigma–Aldrich (anti–beta actin, catalog no.: A5441 and anti–alpha tubulin, catalog no.: T6074). Antibodies for flow cytometry were purchased from Thermo Fisher Scientific (LIVE/DEAD Fixable Far Red Dead Cell Stain Kit; catalog no.: L10120), BioLegend (CD19-APCCy7, catalog no.: 115530; T-cell receptor beta (TCRβ)-APCCy7, catalog no.: 109220; Ly6G-APCCy7, catalog no.: 127624; CD11b-BV510, catalog no.: 101245; and ZOMBIE-AQUA, catalog no.: 423102), or Millipore (F4/80-PE, catalog no.: MABF1530).
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5

Western Blot Analysis of Zebrafish Hdac1

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Western blot assay was performed as described previously [122 (link)]. Primary antibodies used were: anti-zebrafish Hdac1 (GeneTex; 124499) and anti-alpha-Tubulin (Sigma; 6199). According to the manufacturer, the anti-zebrafish Hdac1 antibody was generated to amino acids 297–468 of zebrafish Hdac1. Secondary antibodies used were: IRDye 680LT Donkey anti-Rabbit IgG(H+L) (Licor; 92568023) and IRDye 800CW Donkey anti-Mouse IgG(H+L) (Licor; 92532212). Antibodies used are listed on S2 Table.
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6

Antibody Production and Characterization

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Anti-ES1, mAAT, rhodopsin, red/green opsins, cone-type arrestin-1 and -2 antibodies were prepared in our laboratory or raised commercially. Antigens used for production of each antibody were described in Supplementary Methods. The other antibodies used were commercially available; anti-alpha-tubulin (Sigma-Aldrich), anti-TOM20 (Santa Cruz Biotechnology, inc.), anti-AMPKα (Cell Signaling Technology) and anti-phospho-AMPKα antibodies (Cell Signaling Technology). Each antibody was used at dilutions as described in Supplementary Methods.
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7

Immunofluorescence Analysis of DNA Damage Markers

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Antibodies used in the study: anti-53BP1 (dilution: 1:500, sc-629, Santa Cruz Biotechnology), anti-γH2AX (dilution: 1:1000, 05-636, Upstate Biotechnology, Millipore), secondary antibodies (dilution: 1:600, anti-mouse Alexa 568, A11004, anti-rabbit Alexa 488, A11008, Molecular Probes), anti-pimonidazole (mouse monoclonal 4.3.11.3, Natural Pharmacia International, Belmont, MA, USA, dilution 1:100), anti-BrdU (mouse monoclonal, Clone Bu20a, Dako Deutschland GmbH, Hamburg, Germany, dilution: 1:50), anti-pRB (Ser807/811, 1/1000) (Cell signaling, #9308), anti-Cyclin E1 (Cell signaling, 20808, 1/1000), anti-HIF1a (Cayman Chemicals 10006421, 1/1000), anti-alpha-tubulin (Sigma Aldrich T5168, 1/1000). Reagents used in the study: Doxycycline (D9891, Sigma-Aldrich), nocodazole (M1404, Sigma-Aldrich), Hoechst 33342 (B2261, Sigma-Aldrich), BrdU (Sigma 850187), pimonidazole (Hypoxyprobe Inc, hpi, Middlesex, Burlington, USA), SirDNA kit (SPIROCHROME), AEC kit (Signa Aldrich AEC 101), Dako Faramount aqueous mounting medium (S3025).
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8

Culturing Hippocampal Neurons for Sholl Analysis

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Hippocampal neurons were grown on poly-L-lysine (Sigma) coated coverslips for 4–7 days, fixed in 4% PFA, and stained with anti-alpha tubulin (Sigma) to visualize neurites. Sholl analysis was performed as described64 (link).
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9

Western Blotting Antibody Validation

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Antibodies used for western blotting included anti-HA (2367S, Cell Signaling), anti-V5 (46-0705, Invitrogen), anti-AGO2 (SAB4200085, Sigma), anti-GAPDH (2118S, Cell Signaling), anti-alpha-Tubulin (T6199-200UL, Sigma), anti-BRD4 (13440S, Cell Signaling), anti-CTNNB1 (9587S, Cell Signaling), anti-POU2F1 (8157S, Cell Signaling), anti-ANKRD52 (A302-372A, Bethyl), and anti-CSNK1A1 (sc-6477, Santa Cruz).
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10

Virus Overlay Assay for Capsid Binding

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The virus overlay assay was performed as previously reported [34 (link)] with some modifications. Briefly, protein lysates were separated on Bolt 4–12% Bis-Tris Plus gels and transferred onto nitrocellulose membranes. After incubation with AAV9 or PHP.eB at 5e11 vg/mL, the membranes were fixed with 4% PFA at room temperature for 20 minutes to crosslink the interaction between the capsid and its target protein, followed by 2M HCl treatment at 37°C for 7 minutes to expose the internal capsid epitope for detection. The blots were then rinsed and incubated with anti-AAV VP1/VP2/VP3 (1:20; American research products, Inc., cat. #03–65158), anti-LY6A (1:1000; BD, 553333 or 557403) or anti-alpha-tubulin (1:1000; Sigma, T9026) followed by incubation with a horseradish peroxidase (HRP)-conjugated secondary antibody at 1:5000. The detection of the HRP signal was by SuperSignal West Femto Maximum Sensitivity Substrate using a Bio-Rad ChemiDoc TM MP system #1708280.
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