The largest database of trusted experimental protocols

8 protocols using anti cxcr4

1

Western Blot Analysis of CXCR4, CXCR7, and NF-κB Pathway

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were treated with lysis buffer (PBS containing 1% Triton X-100, protease inhibitor cocktail, and 1 mmol/L phenylmethylsulfonyl fluoride) at 4 °C for 30 min. Equal concentrations of protein were subjected to SDS-PAGE. Following transfer to a Immobilon-P Transfer Membrane, successive incubations with anti-CXCR-4 (1:500; Rabbit; Proteintech, USA), CXCR-7 (1:500; Rabbit; Proteintech, USA), p65 (0.5 µg/mL; Abcam, USA), p-p65 (0.5 µg/mL; Abcam, USA), and p-Iĸb (0.6 µg/mL; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA) antibodies or anti-GAPDH antibody (Sangon Biotech) were performed, followed by corresponding horseradish peroxidase-conjugated secondary antibody (Sangon Biotech) incubation. The immunoreactive proteins were then detected using the ECL system (NCM Biotech, Suzhou, China). Bands were scanned using a densitometer (GS-700; Bio-Rad) and quantification was performed via Quantity One 4.6.3 software (Bio-Rad). Experiments were repeated at a minimum of three times.
+ Open protocol
+ Expand
2

Western Blot Protein Detection Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was performed as already described [21 (link), 30 (link), 34 (link)]. Briefly, for protein detection, primary antibodies anti-β-Actin ((C4) #sc-47,778; Santa Cruz, Dallas, USA), anti-PCNA ((PC10) #sc-56; Santa Cruz, Dallas, USA), anti-AMT (#10633–1-AP; Proteintech Europe, Manchester, UK), anti-GCSH (#16726–1-AP; Proteintech Europe, Manchester, UK), anti-SGPL1 ((H-300) #sc-67,368; Santa Cruz, Dallas, USA), anti-Ezrin ((3C12) #sc-58,758; Santa Cruz, Dallas, USA), anti-CXCR4 (#11073–2-AP; Proteintech Europe, Manchester, UK) P-Cadherin (#13773–1-AP; Proteintech Europe, Manchester, UK) and Stathmin (#3352; Cell Signaling, Danvers, USA) were incubated overnight at 4 °C followed by labelling with a horseradish peroxidase (HPR)-conjugated secondary antibody (mouse #7076; rabbit #7074P2; Cell Signaling, Danvers, USA) for 1 h at room temperature. Finally, the protein signals were visualized with the Clarity™ Western ECL Chemiluminescent Substrate (Bio-Rad Laboratories Inc., USA). Stain free-images and β-actin were used as loading control. Band intensity was analyzed densitometrically with the Molecular Imager ChemiDoc XRS and Image Lab 6.0.1 software (Bio-Rad, München, Germany). Protein detection was repeated at least three times with individually prepared cell lysates from independent passaged cells.
+ Open protocol
+ Expand
3

Western Blot Analysis of Colon Cancer Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was extracted from colon tissues or colon cancer cell lines with radioimmunoprecipitation assay (RIPA) buffer with a proteinase inhibitor. The Protein BCA Assay Kit (Bio-Rad) was used to measure the protein concentration in the lysate. 20 μg of protein were separated by SDS-PAGE (80 V, 2.5 h) and then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, USA). After that, the PVDF membranes were treated with a primary antibody (4°C, overnight). Followed by treatment with a peroxidase-conjugated secondary antibody, all the blots were visualized using ECL solutions and quantified. The following antibodies were used: anti-MMP-2 (1:500, Proteintech, Wuhan, Hubei, China), anti-MMP-9 (1:500, Proteintech), anti-CXCR-4 (1:2000, Proteintech), anti-vimentin (1:2000, Proteintech), anti-N-cadherin (1:2000, Proteintech), anti-E-cadherin (1:1000, Cell Signaling Technology), anti-DLCK3 (1:1000, Boster Bio, CA, USA) and anti-GAPDH (1:1000, Abcam, Cambridge, UK).
+ Open protocol
+ Expand
4

Western Blot Analysis of Stem Cell Regulators

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed on ice for 30 min in RIPA lysis buffer supplemented with protease inhibitors and a phosphatase inhibitor cocktail (Bimake), followed by centrifugation at 12,000 g for 10 min. The protein concentration was measured using a BCA Assay Kit (Beyotime, Shanghai, China). Equal amounts of protein were resolved by SDS–polyacrylamide gel electrophoresis and transferred onto polyvinylidene difluoride membranes. After blocking, membranes were incubated with primary antibodies at 4 °C overnight and secondary antibodies at room temperature for 1 h. The immunoblots were visualized by ECL chemiluminescence (GE healthcare, Buckinghamshire, UK) using a Bio-Rad gel image analysis system. The following primary antibodies were used in this study: anti-ETV4 (sc-113, Santa Cruz), anti-HK2 (22029-1-AP, Proteintech), anti-LDHA (19987-1-AP, Proteintech), anti-PDK1 (3062 T, Cell Signaling Technology), anti-c-MYC (10828-1-AP, Proteintech), anti-OCT4 (11263-1-AP, Proteintech), anti-NANOG (14295-1-AP, Proteintech), anti-LIN28 (11724-1-AP, Ptoteintech), anti-SHH (ab53281, Abcam), anti-GLI1 (66905-1-Ig, Proteintech), anti-CXCR4 (60042-1-Ig, Proteintech), anti-β-actin (A1978, Sigma-Aldrich).
+ Open protocol
+ Expand
5

Western Blotting Analysis of Cell Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blotting analysis was performed using the same procedure demonstrated previously7 (link). Briefly, the radioimmunoprecipitation assay lysis buffer (Beyotime, China) was used to extract total cell protein, which was then quantified using the bicinchoninic acid protein assay kit (Beyotime, China) and resolved on a 6–12% sodium dodecyl sulphate-polyacrylamide gel, and then incubated with relevant primary antibodies. GAPDH and histone (ZSGBBIO, China) were used as loading controls. The following primary antibodies were utilised in this research: anti-PPARδ (Proteintech), anti-CXCR4 (Proteintech, China), anti-vimentin (Proteintech), anti-GAPDH (Proteintech), anti-β-catenin (Proteintech), anti-Slug (Proteintech) and anti-N-cadherin (Proteintech). We used GSK3787 (Abcam) and XAV-939 (Abcam, UK) as PPARδ and β-catenin inhibitors, respectively. The enhanced chemiluminescence system (Bio-Rad, Hercules, EDA USA) was used to detect protein expression levels and Scion imaging software was used to capture images.
+ Open protocol
+ Expand
6

Comprehensive Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot was performed as previously described (35 (link)). Primary antibodies used were: anti-TNFAIP6 (1:1000, Proteintech, China), anti-TLR6 (1:1000, ABclonal, China), anti-FAS (1:3000, Proteintech, China), anti-CCL3 (1:1000, Proteintech, China), anti-ICAM-1 (1:3000, Proteintech, China), anti-CCL2 (1:3000, Proteintech, China), anti-CXCR4 (1:3000, Proteintech, China), anti-VEGFA (1:2000, Proteintech, China), anti-β-Tubulin (1:20000, Proteintech, China) and anti-GAPDH (1:2000, Servicebio, China).
+ Open protocol
+ Expand
7

Quantification of CXCR4, CXCR7, and NF-κB activation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were treated with lysis buffer (PBS containing 1% Triton X-100, protease inhibitor cocktail, and 1 mmol/L phenylmethylsulfonyl uoride) at 4 °C for 30 min. Equal concentrations of protein from the cytoplasm and nucleus were subjected to SDS-PAGE. Following transfer to a Immobilon-P Transfer Membrane, successive incubations with anti-CXCR-4 (1:500; Rabbit; Proteintech, USA), CXCR-7 (1:500; Rabbit; Proteintech, USA), p65 (0.5 µg/mL; Abcam, USA), p-p65 (0.5 µg/mL; Abcam, USA), and p-Iĸb (0.6 µg/mL; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA) antibodies or anti-GAPDH antibody (Sangon Biotech) were performed, followed by corresponding horseradish peroxidase-conjugated secondary antibody (Sangon Biotech) incubation. The immunoreactive proteins were then detected using the ECL system (NCM Biotech, Suzhou, China). Bands were scanned using a densitometer (GS-700; Bio-Rad) and quanti cation was performed via Quantity One 4.6.3 software (Bio-Rad). Experiments were repeated a minimum of three times.
+ Open protocol
+ Expand
8

Protein Expression Analysis of BM-EPCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Respectively, total protein was extracted from BM-EPCs and BM-EPCs sheets (1 × 106 cells) and quantified using the BCA Protein Assay Kit (TaKaRa, Japan).Proteins lysates were isolated by using 10% SDS-PAGE and then transferred them to PVDF membrane (Millipore, USA).The membranes were blocked at room temperature for 2 h using 5% non-fat dried milk dissolved in Trisbuffered saline with TWEEN-20 (TBST), then incubated overnight at 4 °C with specifific primary antibodies.The primary antibodies included anti-CXCR4 (1:1000; cat.no.11073-1-AP, Proteintech, WuHan, China), P-CXCR4 (1:1000;cat.no.bs-12256R, Bioss, Beijing, China),PI3K(1:1000;cat.no.ab86714,Abcam,USA),P-PI3K(1:1000;cat.no.ab182651,Abcam,USA),AKT(1:500;cat.no.10176-2-AP, Proteintech, WuHan, China),P-AKT(1:3000;cat.no.66444-1-Ig,Proteintech,WuHan,China), eNOS(1:300;cat.no.bs-20609R,Bioss, Beijing, China) and Tubulin (1:200;cat.no.10068–1-AP, Proteintech, WuHan, China). Following, the membrane was exposed to the HRP-conjugated secondary antibodies (1:3000; cat. no. SA00001-2, Proteintech, WuHan, China) for 1 h at room temperature. Proteins were detected with Super ECL Plus kit (Applygen, Beijing, China). The signals were quantified with Image Studio.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!