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3 protocols using mouse monoclonal anti xpress

1

Quantifying Protein Binding and Internalization

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Following the binding assay described above, cells were fixed with methanol for 5min at -20°C. After washing with PBS, cells were blocked with 3% BSA in PBS for 1h at RT and incubated with mouse monoclonal anti-Xpress (1:2000, Invitrogen, Life Technologies, Carlsbad, CA, USA) overnight at 4°C. After washing, cells were incubated with Alexa Fluor 488-conjugated goat anti-mouse IgG (1:2000, Invitrogen, Life Technologies, Carlsbad, CA, USA) for 1h at RT. After washing off the secondary antibody, cells were stained with 4'6-diamidino-2-phenylindole (DAPI; Roche Diagnostics GmbH, Vienna, Austria) and Whole Cell Stain (Invitrogen, Life Technologies, Carlsbad, CA, USA). Following a final washing step, cells were mounted in ibidi Mounting Medium (Ibidi GmbH, Munich, Germany). Binding and internalization of proteins were examined using a Zeiss Axiovert 200 M fluorescence microscope or a Zeiss 510 Meta confocal microscope (Zeiss, Jena, Germany).
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2

Western Blot and Non-Denaturing Gel Electrophoresis

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For Western blot analysis, 30 μg of proteins were transferred to PVDF membranes (Immobilon-P, Merck Millipore, Billerica, MA). For non-denaturing gel electrophoresis cell pellets were directly dissolved in an equal volume of 2x sample buffer (120 mM Tris-HCl pH 6.8, 20% glycerol, 0.1% bromophenol blue), and sodium dodecyl sulfate (SDS) removed from all gel solutions and electrophoresis buffers. Membranes were blocked for 1 h in TBS-Tween containing 5% nonfat dry milk. Rabbit polyclonal anti–NR2E3 antibody (#OAAB10504, Aviva Biosystems, San Diego, CA) was diluted 1:800, rabbit polyclonal anti-GFP 1:5’000 (#G1544, Sigma), mouse monoclonal anti-Xpress 1:500 (Invitrogen), rabbit polyclonal anti-alpha-tubulin (H300) 1:5000 (Santa Cruz Biotechnology, Santa Cruz, CA) and mouse monoclonal anti-α-tubulin 1:40’000 (#T5168, Sigma). The secondary ECL donkey anti-rabbit IgG horseradish peroxidase (HRP) and sheep anti-mouse IgG HRP-conjugated antibodies were diluted 1:25’000 (Amersham Biosciences, Otelfingen, Switzerland) and used to detect protein expression by chemiluminescence using LumiGlo (Amersham Biosciences) in a Fujifilm LAS-4000 mini imaging system (Bucher Biotec, Basel, Switzerland). Molecular weight markers were purchased at Fermentas (PageRuler™Plus).
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3

cDNA Cloning and Antibody Characterization

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cDNAs for human ISG15 and UBCH8 and mouse UBP43 were subcloned into pFlag-CMV10 vector and/or pcDNA3-Myc vector32 (link). Human p53 cDNAs were obtained from Korean human gene bank. p53, its deletion constructs, and K-to-R mutants were subcloned into pcDNA3-HA vector and pcDNA-HisMax vector (Invitrogen)67 (link). Site-directed mutagenesis was performed as recommended by the manufacturer's instructions (Stratagene).
Antibodies used were mouse monoclonal anti-Xpress (Catalogue number P/N 46-0528, Invitrogen), mouse monoclonal anti-Flag M2 (F3165, Sigma), mouse monoclonal anti-Myc (9E10, Santa Cruz), mouse monoclonal anti-p53 (DO-1, Santa Cruz), rabbit polyclonal anti-p21 (C-19, Santa Cruz), mouse monoclonal anti-β-actin (C4, Santa Cruz), rabbit anti-phospho-p53 (9284S, Cell Signaling) and rabbit anti-acetyl-p53 (2525S, Cell Signaling). Polyclonal anti-ISG15 antibody was generated by injecting purified ISG15 protein to rabbit32 (link). shRNA were purchased from Open Biosystems. Target sequences of shRNAs for ISG15 and EFP are: 5′- CTGAGCATCCTGGTGAGGAAT -3′ for ISG15; 5′- GAACTCATCTTTGCCAGTA -3′ (5′-UTR (untranslated region) for ISG15; 5′- GAGTGAGATCCAGACCTTGAA -3′ for EFP; 5′- GCAGAACTCTCCTTGGATA -3′ (3′-UTR) for EFP. All antibodies were diluted 1:1,000 with PBS containing 0.1% Triton X-100 and 3% BSA, except anti-β-actin, which was diluted 1:2,500.
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