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45 protocols using immulite 2000 system

1

Quantitative Amino Acid and Metabolite Analysis

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Plasma and urinary levels of amino acids were analyzed using a quantitative method based on ion-exchange chromatography with post-column derivatization with ninhydrin (Biochrom, Cambridge, UK). Total plasma homocysteine levels were evaluated using a chemiluminescence immunoassay (Immulite 2000 system, Siemens Healthcare Diagnostics, Marburg, Germany). Urinary organic acids were measured as trimethylsilyl derivatives by gas chromatography/tandem mass spectrometry after urease treatment and ethyl acetate liquid–liquid extraction without oximation [9 (link)]. Plasma-free carnitine and acylcarnitines were quantified by a stable isotope dilution tandem mass spectrometry method. At the time of diagnostic confirmation, all mothers are routinely screened for amino acids and acylcarnitines in DBS to rule out maternal disease.
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2

IGF-1 Measurement in Serum Samples

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Blood Samples were taken from the antecubital vein of patients and controls, and they were processed within 1 h after collection, centrifuged for 15 min, aliquot, and stored at − 80 °C until analysis. IGF-1 was measured in serum using a solid-phase enzyme-linked chemiluminescent immunoassay on an Immulite 2000 system (Siemens Healthcare Diagnostics, Inc).
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3

Glucose, Lipids, and Insulin Analysis

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Plasma glucose concentrations were assessed with the glucose oxidation method with a Biosen glucose analyzer (EKF Diagnostics, Barleben, Germany). Plasma cholesterol and lipids were measured with a Cobas 8000 modular analyzer (Roche Diagnostics, Rotkreuz, Switzerland) and plasma insulin using a chemiluminescent immunometric assay on an Immulite 2000 system (Siemens, Breda, the Netherlands).
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4

Metabolic Biomarker Quantification Protocol

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Plasma glucose concentrations were measured with the glucose oxidase method using a Biosen C-line plus glucose analyzer (EKF Diagnostics, Barleben/Magedeburg, Germany). Insulin and cortisol were both measured on an IMMULITE 2000 system (Siemens Healthcare Diagnostics B.V., Breda, The Netherlands). Cortisol was measured with a chemiluminescent immunoassay (intra-assay variation: 7–8%; total assay variation: 7–8%; detection limit: 50 nM). Insulin was measured with a chemiluminescent immunometric assay (intra-assay variation: 3–6%; total assay variation: 4%; detection limit: 15 pm). C-peptide levels were measured with a 125I radioimmunoassay (Merck Millipore, St. Charles, Mo., USA) (intra-assay variation: 6–9%; total assay variation: 7–11%; detection limit: 50 pM). Glucagon was measured with the 125I radioimmunoassay (Merck Millipore) (intra-assay variation: 9–10%; total assay variation: 5–7%; detection limit: 15 ng/l).
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5

Inflammatory Biomarkers in Cohort Study

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C-reactive protein (CRP). Wide-range CRP was measured in fresh serum samples by a commercial latex-enhanced immunoturbidimetry method on an Advia 2400 Clinical Chemistry System (Siemens). Reference values with the method were 0–0.5 mg/dL. The measurement was available for 1499 individuals [45 (link)].
Erythrocyte sedimentation rate (ESR). ESR was measured in blood samples in K3EDTA tubes (Becton Dickinson, Franklin Lakes, NJ, USA) with a TEST-1 automatic apparatus (Alifax, Padova, Italy). The TEST-1 apparatus was validated against the Westergren reference method according to the criteria of the International Council for Standardization in Hematology. Reference values are 0–20 mm/h for men and 0–30 mm/h for women. ESR determination was available for 1472 participants [37 (link)].
Serum cytokines. Serum concentrations of interleukin (IL)-6, IL-8, TNF-alpha, and soluble IL-2 receptor (sIL-2R) were determined in fresh serum samples using a chemiluminescent immunoassay (IMMULITE 2000 System, Siemens Health Care Diagnostics, Barcelona, Spain). Results were available for 1499 individuals [46 (link)].
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6

Prostate Cancer Biomarker Analysis

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Serum total-PSA (tPSA) and free-PSA (fPSA) were measured using the Immulite® 2000 system (Siemens Healthcare Diagnostics srl, Siemens, Milan, Italy). For PCA3 analyses, urine samples were collected after digital rectal examination (DRE) using a Progensa™ PCA3 (Gen-Probe, San Diego, CA, USA) assay following the manufacturer’s instructions. PCA3 mRNA and PSA mRNA values were determined. The PCA3 score was determined by calculating the PCA3 mRNA/PSA mRNA × 1000 ratio. Urinary creatinine was measured using a Cobas 6000 (c501) analyser (Roche Diagnostics S.p.a., Monza, Italy).
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7

Determination of Plasma Metabolic Markers

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Plasma glucose levels were determined immediately using a Biosen C-line plus glucose analyzer. Plasma insulin and cortisol levels were determined from frozen heparin plasma by immunoassay using the Immulite 2000 system (Siemens Healthineers, Erlangen, Germany). Plasma glucagon was determined by radioimmunoassay (Linco Research, St. Charles, MO). Blood for the determination of plasma GLP-1 was collected in ethylenediaminetetraacetic acid-coated vacutainers with added Diprotin-A (Sigma-Aldrich Corporation, St. Louis, MO), a dipeptidyl peptidase-4 inhibitor. Active GLP-1 levels were determined from frozen plasma using a commercially available enzyme-linked immunosorbent assay kit (EGLP-35K, Millipore, Billerica, MA) in accordance with the manufacturer's instructions. Note that we did not perform solidphase extraction, and cross-reactivity of antibodies may have resulted in higher measured active GLP-1 [33] . Plasma FFAs were determined by the enzymatic colorimetric method (NEFA C test kit; Wako Chemicals, Neuss, Germany).
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8

Metabolic Syndrome Assessment Protocol

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Fasting glucose levels were routine measurements by the Department of Clinical Biochemistry. Fasting plasma levels of insulin were measured using Immulite 2000 System (Siemens, NY, USA) and insulin resistance was calculated using the homeostasis model assessment (HOMA-IR) [24 (link)]. Metabolic syndrome was defined according to the 2009 consensus definition for high risk populations [25 (link)]. The assessment of metabolic syndrome was based on the presence of at least three of the five following criteria: elevated waist circumference (≥94 cm, as recommended for high risk populations); elevated triglycerides (≥1.7 mmol/L); reduced HDL-C (<1.0 mmol/L); elevated blood pressure (systolic ≥130 or diastolic ≥85 mm Hg, or anti-hypertensive treatment); elevated fasting glucose (≥100 mg/dL).
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9

Evaluating Metabolic and Kidney Biomarkers

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Routine blood tests, including complete blood count (CBC), liver function tests, serum creatinine, serum cholesterol and triglycerides were performed.
Serum AFP was evaluated by chemiluminescent immunometric technique on the Immulite 2000 system (Siemens Medical Solutions Diagnostics, Los Angeles, California, USA). The eGFR was estimated based on the following formula: eGFR=186×(Creatinine88.4)1.154×Age0.203×(1.210ifblack)×(0.742iffemale) (Levey et al., 1999 (link)). Quantitative assessments of serum AGEs were measured by ELISA kit (MyBioSource, San Diego, CA 92195-3308, USA, Cat No. MBS267540). The homeostasis model assessment (HOMA) method (Matthews et al., 1985 (link)) was evaluated as follows: Insulin resistance (HOMA-IR) = fastingseruminsulin(FSI)×fastingplasmaglucose(FPG)405
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10

Quantifying Thyroid Hormone Levels

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Plasma thyroid-stimulating hormone (TSH) was determined with the TSH rat ELISA kit from MP Biomedicals (Illkirch-Graffenstaden, France). Plasma free triiodothyronine (free T3) and free thyroxine (free T4) levels were determined by immunoassay on an IMMULITE® 2000 system from Siemens (Saint-Denis, France).
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