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39 protocols using xcelligence real time cell analyzer

1

Quantifying Cell Proliferation Capacity

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Cell proliferation capacity was monitored using an xCELLigence real-time cell analyzer (Roche Life Science, Indiana, USA) and examined by a colony formation assay according to the manufacturer's instructions. For the colony formation assay, cells transfected with a plasmid expressing CPS1-IT1 or the empty vector were seeded onto 6-well plates at a density of 500 cells/well and maintained for 12 days in DMEM containing 10% FBS. The medium was replaced every 3 days. Colonies were fixed with methanol twelve days later and stained with 0.1% crystal violet (Sigma–Aldrich, St. Louis, MO, USA). Visible colonies were imaged and manually quantified.
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2

Real-Time Monitoring of Pravastatin's Effects

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Cell proliferation was measured with the xCelligence Real-Time Cell Analyzer (Roche, Basel, Switzerland). The xCelligence system allows us to monitor cell proliferation continuously in real time. The electrical impedance caused by the adherent cells is converted into cell indices by the xCelligence software (v.1.2.1, Roche, Basel, Switzerland). A total of 2000 to 3000 cells from 4–5 biologically distinct ECFC lines were seeded in quadruplicates in EGM-2 with 8% FBS and 1% P/S onto a gold-coated E-Plate View 96-well plate (Roche) and then placed into the Real-Time Cell Analyzer SP station, positioned in a 37 °C incubator with 5% CO2 supply. After reaching a stable cell index, different concentrations (2–2000 µM) of pravastatin with or without 200 µM mevalonate were added. Cell growth was continuously monitored for 72 h after pravastatin addition.
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3

Antibody Mediated Macrophage Survival Assay

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To assess the functionality of the antibodies in blocking macrophage survival in culture, real-time cell proliferation assays were performed. 3 × 104 canine bone marrow macrophages were used. Cells were harvested as described elsewhere [22 (link)]. Macrophages were grown in the presence of rhCSF-1 (20 ng/ml, Invitrogen). Cells were placed on an xCELLigence Real-Time Cell Analyzer (Roche) 96-well plate in 100 μl of Rosewell Park Memorial Institute culture medium. The plate was scanned to measure the initial numbers of cells in each well, and then purified mAb 3.1 treatment was added. The small-molecule inhibitor of CSF-1R, GW2580, was used as a control. Negative controls received equivalent concentrations of murine serum IgG (Sigma) or DMSO (for comparison to GW2580). rhCSF-1 and antibodies were replaced during the experiment. Cells were then maintained at 37°C and 5% atmospheric CO2 for the duration of the experiment. Cell proliferation was assessed every 15 min.
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4

Cell Viability Assay with AZD9291

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Cell viability assay was carried out by plating 3000 cells/well into 96-well plates and incubated overnight. The cells were drugged with AZD9291 across a five-concentration range from 10 nM to 1000 nM and then incubated for 72 h [37 (link)]. Viability was assayed by MTT, trypan blue staining, or by a xCELLigence real-time cell analyzer (Roche Life Science, Pleasanton, CA, USA) according to the manufacturer’s instructions [38 (link)].
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5

Anti-cancer effects of Polyphyllin compounds

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PC-9 cells (4×104/100μl/well) plated in 96-well plate were placed in 96-well plates and treated with 2 μM of Gracillin, 1 μM of Polyphyllin I, 1 μM of Polyphyllin II, 4 μM of Polyphyllin III, 32 μM of Polyphyllin VI, 1 μM of Polyphyllin VII and 1 μM of Polyphyllin H. Cell viability was then measured using the Cell Counting Kit-8 (CCK-8) to determine cell viability at 24, 48, and 72 h.
Cell viability of human lung adenocarcinoma (PC-9) cells (3×103/100 μl/well) plated in specific xCELLigence-E plates was sequentially and in real time monitored for 72 h using the xCELLigence-RealTime Cell Analyzer (Roche Applied Science, Mannheim, Germany).
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6

Cancer Cell Proliferation and Migration Assays

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For proliferation assay, the number of cancer cells was monitored by the real-time cell analysis (RTCA) of a cell culture system as described in our previous study [23 (link)]. Briefly, 2.5 × 104 cancer cells were added into an individual well of culture E-Plate (Roche Applied Science, USA) containing 100 μl normal or cancer-associated hMSC-conditioned media. The E-Plates were incubated at 37°C and monitored on the RTCA system by the xCELLigence real-time cell analyzer (Roche Applied Science, USA) at 5-minute time intervals for 7 days. The number of cancer cells in each well was continuously monitored throughout the entire culture period and reported as the cell index. Cancer cells cultured in DMEM+10% FBS served as controls.
For migration assay, hMSC-conditioned media were used to induce migration of hepatoblastoma C3A cells through 8 μm transwell (Costar, Corning, USA) as described in our previous study [24 (link)]. 1 × 106 C3A cells were seeded in the transwell inserts which were placed into wells of the 24-well plate (Costar, Corning, USA) containing 600 μl of various hMSC-conditioned media. After 6 hours of culture, the numbers of C3A cells that migrate to the other side of the transwell's membrane were determined by hematoxylin staining. C3A cells cultured in C3A-conditioned medium served as controls.
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7

Real-Time Cell Proliferation Monitoring

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The cell proliferation capacity was monitored with an xCELLigence real-time cell analyzer (Roche Life Science, Indiana, USA) according to the manufacturer’s instructions.
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8

Real-Time Cell Analysis for Adhesion Monitoring

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We used the xCELLigence Real-time Cell Analyzer (Roche Diagnostics, GmbH, Mannheim, Germany) for the measurements. This system monitors the status of cells, namely cell number and adhesion, by performing calculations of the electrical impedance across microelectrodes at the bottom of the culture plates. These plates contain wells similar to that of 96-well plates (E-Plates, Roche Diagnostics). The analyzer automatically calculates the frequency-dependent electrical impedance and provides the cell index (CI). As more cells attach on E-Plates, the impedance value is higher, leading to a larger CI number.[9 (link)] The system provides the calculation of normalized CI as the quotient of CI at each time point to CI at a reference time point. Cell cultures were treated 1 day after dispersion of cells in the wells of E-Plates and monitored for 72 h. Values of normalized CI are presented as mean of two different measurements.
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9

Real-Time Cellular Migration and Invasion Assay

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xCELLigence Real-Time Cell Analyzer (Roche Applied Science) was used to measure the changes in migration and invasion ability of LSCC cells in response to the changes in miR-744-3p or PDCD4 levels. CIM-Plate 16 was adopted for the migration and invasion assay. The dynamic changes of cell number (expressed as cell migration index) from upper chamber (coated with fibronectin) to lower chamber due to the migratory capacitance of LSCC cells were measured continuously over 24 hours. For the measurement of invasion propensity, the upper chamber of CIM-Plate 16 was coated with Matrigel (1:30 dilution; BD Biosciences) for 4 hour at 37°C before cell seeding. Subsequently, the dynamic invasion of LSCC cells through the Matrigel layer was recorded and expressed as cell invasion index.
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10

Huh7 and HepG2 Proliferation Assay

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Huh7 or HepG2 cells were seeded at 3 × 103 per well in 96-well E-plates and cultured in DMEM in the presence or absence of various concentrations of HGK. The cell proliferation rates were monitored with an xCELLigence real-time cell analyzer (Roche Life Science, Indianapolis, IN, USA) according to the manufacturer’s instructions.
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