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Pbabe egfp

Manufactured by Addgene

PBABE-EGFP is a plasmid vector that contains the EGFP (Enhanced Green Fluorescent Protein) gene under the control of a constitutive promoter. It is commonly used for the expression and visualization of EGFP in various cell lines.

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2 protocols using pbabe egfp

1

Autophagy and Actin Dynamics Regulation

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pN3-3xFlag-Control (Addgene, 107717, Guntram Suske Lab [75 (link)]); pmRFP-LC3 (Addgene, 21075, Tamotsu Yoshimori Lab [43 (link)]); pMXs-puro GFP-Sqstm1/p62 (Addgene, 38277, Noboru Mizushima Lab [49 (link)]); pBABE-puro mCherry-EGFP-LC3B (Addgene, 22418, Jayanta Debnath Lab [76 (link)]); pBABE-EGFP (Addgene, 36999, Debu Chakravarti Lab [77 (link)]); ECFP-SSH1ΔC (N461) (Dr. Mizuno lab [51 (link)]); EGFP-SSH1 (Dr. Storz lab [69 (link)]); mKeima-Red-Mito-7 (Addgene, 56018); pOPTN-EGFP (Addgene, 27052Beatrice Yue Lab [78 (link)]); pMXs-puro GFP-Sqstm1/p62ΔC (Addgene, 38282, Noboru Mizushima Lab [49 (link)]); pMXs-puro GFP-Sqstm1/p62 D337, 338, 339A (GFP-SQSTM1-LIR) (Addgene, 38280, Noboru Mizushima Lab [49 (link)]); HA-Ubiquitin (Addgene, 18712, Edward Yeh Lab [79 (link)]); pDR125 (Addgene, 37150, Dale Ramsden Lab); pN3-3xFlag-SSH1, mCherry-EGFP-Sqstm1/p62, mCherry-EGFP-Sqstm1S403A, mCherry-EGFP-Sqstm1S403E, pN3-Flag-SSH1ΔC, pN3-Flag-SSH1ΔN and pN3-Flag-SSH1ΔNC393S were generated in this work (see methods below).
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2

Retroviral Transduction of Nrp1 and Sema3a

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The open reading frame of Nrp1 was cloned into the pBabe vector. The open reading frame of Sema3a was cloned into pBabe-EGFP (Parker et al., 2012 (link)) (addgene, 36999). shNrp1 plasmids were purchased from Origene (OriGene, TG513573A). 15 µg of retroviral plasmid DNA was transfected using FuGENE HD (Roche, E2311) into Platinum E cells (Cell Biolabs), which were plated on a 10-cm tissue culture dish at a density of 5 × 106 cells per dish, 24 h before transfection. After 48 h of transfection, viral medium was harvested and filtered through a 0.45 μm cellulose filter. The viral supernatant was concentrated overnight using Retro-X concentrator (Clontech, 631456) according to manufacturer’s protocol. The virus was then resuspended in growth medium mixed with Polybrene (Sigma) to a final concentration of 6 μg ml−1.
Tw2-MB and Pax7-MB were plated at a density of 200,000 cells per 35-mm plate in growth medium. After 24 h, the growth medium was replaced with freshly made viral mixture containing Polybrene and bFGF (5 ng ml−1). 24 hrs later, viral medium was replaced with growth medium with bFGF for recovery.
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