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4 protocols using vascular endothelial growth factor (vegf)

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Protein Extraction and Western Blot Analysis

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Lung tissues and PASMCs were lysed in radio immunoprecipitation assay (RIPA) lysis buffer (containing 1% PMSF) on ice to extract total proteins. Nuclear and cytoplasmic proteins were extracted following the manufacturer's recommendations of the nuclear and cytoplasmic extraction kit (Beyotime). After protein quantification, the same amount of protein from each sample were separated on sodium dodecyl sulphate‐polyacrylamide gel electrophoresis (SDS‐PAGE), and then the proteins on the gel were transferred to PVDF membranes (Millipore) by semi‐dry electrophoretic transfer system (Bio‐rad). The membranes were then blocked with 5% BSA and incubated with primary antibodies against calpain‐1 (1:1000, proteintech), HIF‐1α (1:1500, ABclonal), P65 (1:2000, proteintech), β‐actin (1:5000, proteintech), Lamin B (1:10000, proteintech), VEGF (1:1000, ABclonal), TGF‐β1 (1:800, Wanleibio), PCNA (1:1500, ABclonal), MMP2 (1:1000, ABclonal) and collagen I (1:1000, Wanleibio) overnight at 4°C. On the second day, membranes were incubated with HRP‐conjugated secondary antibodies (1:10000, ABclonal). The immune response bands were visualized with a chemiluminescence reagents (Biosharp).
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2

Immunoblotting and Immunoprecipitation Assays for Hypoxia Signaling

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IP lysis buffer with a protease inhibitor cocktail was used to harvest the protein from the cells. 40 μg of total protein was transferred onto a PVDF membrane. The membrane was subjected to immunoblotting by incubating with specific primary antibodies overnight at 4°C. Antibody signals were detected by ChemiDox XRS+.
For immunoprecipitation experiments, cells were harvested, lysed, quantified, and precleared with 20 μL of Dynabeads™ Protein G (ThermoFisher Scientific, #10004D, USA). After centrifugation, the supernatant was collected and incubated with antibody at 4°C overnight. Dynabeads™ Protein G was added to the protein‐antibody complex for additional incubation. Subsequently, the beads were collected and boiled. Western blot analysis was performed on the samples, with 20 μg of total protein used as the input control.
The antibodies for Western Blot: HIF‐1α (CST, #36169S, 1:1000), Hydroxylation HIF‐1α (CST, #3434T, 1:1000), PHD3 (Novus, #NB100‐139, 1:1000), GLUT1 (CST, #12939S, 1:1000), RP58 (Proteintech, #12714‐1‐AP, 1:1000), PHD2 (CST, #4835S, 1:1000), VEGF (Abclonal, #A12303, 1:500), N‐cadherin (CST, #13116, 1:1000), HK2 (Proteintech, #22029‐1‐AP, 1:2000), Ubiquitin (CST, #3936S, 1:1000), PGK1 (Proteintech, #17811‐1‐AP, 1:1000), β‐actin (Sigma, #A5441, 1:10000), ABCG2 (Sigma‐Aldrich, MAB4146, 1:1000), and anti‐Flag (CST, #14793, 1:1000).
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3

Histological Analysis of BCP Bioceramics

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Fixed with 4% formaldehyde for 24 h, harvest samples were then decalcified in 10% EDTA decalcifying solution for 4 weeks and solution was refreshed each two days. Then, dehydration, embedding, and section into paraffin slices were conducted. Hematoxylin and eosin staining (H&E, Google biotechnology, China), immunohistochemistry staining (IHC, MXB biotechnologies, China) and immunofluorescence staining (IF) were carried out according to the manufacturer's protocols. For IHC and IF staining, the primary antibodies were against CD301b (eBioscience, USA), α-SMA (CST, USA), VEGF (ABclonal, China), CaN (ABclonal, China), and STIM1 (ABclonal, China). For IF staining, the anti-mouse and rabbit secondary antibodies were 594 nm red and 488 nm green fluorescent markers (Abbkine, USA). The DAPI dye (Zhongshan Biotechnology, China) was used to stain the nucleus of cells in tissue and cells. All stained sections were captured with an Olympus DP72 microscope (Olympus, Japan), and each sample was captured for 3 images of BCP bioceramics surroundings.
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4

Protein Extraction and Western Blot Analysis

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About 100 μL RIPA buffer containing protease inhibitor and 1% phosphatase inhibitors was used to lyse the cells and collected into the pre-cooled tube, followed by ultrasonic treatment on ice. Each sample was quantified and normalized by BCA kit (Thermo Fisher Scientific, USA). After mixed with 5X loading buffer, the protein mixture was heated for 10 min at 95 °C. Then, successive steps of separation by SDS-PAGE gelatin, transfer to nitrocellulose, soaking into 5% fat-free milk and incubation with primary and secondary antibodies (BioSharp, China) were carried out. The primary antibodies were against STIM1 (ABclonal, China), CaN (ABclonal, China), VEGF (ABclonal, China), NFATc1 (ABclonal, China) and GAPDH (ABclonal, China). At last, the results were visualized by WesternBright ECL HRP Substrate Kit (Advansta, U.S.A).
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