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36 protocols using lc net 2 adc

1

Comprehensive Chemical Characterization of Biorefinery Feedstock

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The chemical characterization of the raw material was carried out by measuring the extractives, ash, glucan, hemicelluloses and lignin content. The extractive compounds were evaluated in ethanol-toluene (TAPPI T204 cm-97). Ash content was measured using the TAPPI T211 om-02 standard procedure and moisture content employing TAPPI T264-om-88. Lignin, hemicelluloses and cellulose content, measured as glucan, were determined using NREL-TP-510-42618 [30 (link)].
The solids derived from the different biorefinery steps were chemically characterized by quantitative acid hydrolysis, following the procedure described in NREL-TP-510-42618. The chemical characterization of the liquid phases from autohydrolysis was carried out using HPLC (Jasco LC-Net II/ADC, 300 mm × 7.8 mm Aminex HPX-87H column) (Jasco-Spain, Madrid, Spain). Autohydrolysis was followed by a post-hydrolysis for each liquid obtained to ensure that only those polysaccharides were removed from the starting material during autohydrolysis. Post-hydrolysis and subsequent HPLC analysis was carried out following the methodology described in a previous work [30 (link)].
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2

HPLC Analysis of Phenolic Compounds

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The crude extracts and each chromatographic fraction were analyzed by HPLC [77 (link)]. Briefly, the analyses were carried out using a Jasco-LC-Net II ADC liquid chromatograph system (Jasco Inc., Easton, MD, USA) equipped with a diode array detector (DAD). Phenols were separated using a Mediterranea Sea C18 reverse-phase analytical column (25 cm length × 4.6 mm i.d., 5 μm particle size; Teknokroma, Barcelona, Spain). The gradient profile was performed with solvent A (water with 1% formic acid) and solvent B (acetonitrile with 1% formic acid) and developed as follows: from 5% B to 25% B for the first 30 min, to 50% B over the next 15 min, to 100% B over 2 min, to 25% B over the next 3 min, to 5% B over the next 2 min, and finally maintained at 5% B for 3 min (55 min total). The flow rate was 1 mL/min. The spectra from all peaks were recorded in the 200–600 nm range, and the chromatograms were acquired at 360 nm. The quantification of individual phenols was performed using an eight-point regression curve in the range of 0–250 μg on the basis of standards.
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3

HPLC-Based Sugar Quantification in Liquors

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The sugar quantification in extracted liquors was quantitatively determined in a high performance liquid chromatograph ((HPLC) Jasco LC Net II/ADC (column oven and quaternary gradient pump), (Jasco Corporation, Hachioji, Tokyo, Japan) equipped with a refractive index detector and a photodiode array detector. We used 0.005 N H2SO4 prepared with 100% deionised and degassed water as mobile phase (0.35 mL/min flow, 40 °C and injection volume 20 µL). High purity of different sugars such as glucose, fructose, xylose, arabinose, and rhamnose, and other by-products such as formic acid, citric acid, ethanol, lactic acid, furfural and hydroxymethylfurfural (HMF) were used for the calibration curve.
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4

Determining Fructan Molecular Weight

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The three different pools of fructans (Fruct1, Fruct2, and Fruct3) were studied by high performance size-exclusion chromatography (HPSEC) as described in Dos-Santos et al. [23 (link)]. The average molecular weight (MW) was measured in a Jasco equipment (LC-Net II ADC, Kyoto, Japan) with a refractive index detector (Jasco RI-1530) and injection valve (Rheodyne, loop 20 μL, Cotati, CA, USA). A TSKgel G3000PWXL column (300 × 7.8 mm i.d., Tosoh Bioscience GmbH, Griesheim, Germany) was used after calibration with 70, 40, 6 kDa, maltotriose, sucrose and glucose (Fluka, Buchs, Switzerland). The elution was performed at a flow rate of 1 mL/min. The regression equation to calculate the average MW of fructan pools was: telut=1.614logMW+16.681,
with a R2 value of 0.9918. The average DP was calculated by dividing the calculated MW by 162.
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5

HPLC Analysis of Phenolic Compounds

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The presence and quantification of tricin, ρ-coumaric acid, ferulic acid, cinnamic acid, and salicylic acid by high-performance liquid chromatography (HPLC) analyses were compared with the standards attained by the method presented by Anh et al. [33 ]. In brief, the HPLC system consisted of a pump (PU-4180 RHPLC, Jasco, Tokyo, Japan), a controller (LC-Net II/ADC, Jasco, Japan), and a detector (UV-4075 UV/VIS, Jasco, Tokyo, Japan). A column (130 Å, 5 µm, 2.1 × 100 mm) (XBridge BEH Shield RP18, Waters Cooperation, Milford, MA, USA) was used as a stationary phase. Solvent A (0.1% formic acid in water) and solvent B (acetonitrile) were applied as mobile phases, which were fixed in the same gradient program reported by Anh et al. [33 ]. Each operation was continued for 35 min at room temperature. Every sample was identified by a corresponding peak scanned at 350 nm for tricin and 280 nm for ρ-coumaric acid, ferulic acid, cinnamic acid, and salicylic acid. The peak area was used to quantify these compounds.
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6

HPLC-Fluorescence Detection of Aflatoxins

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A Luna C18 (2) column of 4.6 x 150 mm, 5 µm particle size, 100Å (Phenomenex, Torrance, CA, USA), protected by a pre-column (Phenomenex, Torrance, CA, USA): pre-column holder, analytical guard cartridge system (4.6 x 10 mm), cartridge guard column and C 18 cartridges security guard (4 x 3 mm), was used for the separation of AFs in a 1100 Series HPLC system (Agilent Technologies, Barcelona, Spain) equipped with a quaternary pump (G1311A), autosampler (G1313A) and a fluorescence detector FP-2020 Plus communicated via a LC-Net II/ADC (Jasco, Madrid, Spain). A postcolumn derivatization with a Kobra Cell system (R-Biopharm, Madrid, Spain) was used to quantify AFB 1 and AFG 1 . The chromatographic conditions which were previously optimized for determining AFs in sample extracts are specified in the reference literature (Hernández-Martínez and Navarro-Blasco, 2010).
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7

HPLC Analysis of Phenolic Compounds

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Solutions of 10 mg/mL of each sample were analyzed by HPLC [21 (link)]. Briefly, the analyses were carried out using a Jasco-LC-Net II ADC liquid chromatograph system equipped with a diode array detector (DAD). Phenols were separated using a Mediterranea Sea C18 reverse-phase analytical column (25 cm length × 4.6 mm i.d., 5 μm particle size; Teknokroma, Barcelona, Spain). The gradient profile was formed using solvent A (water with 1% formic acid) and solvent B (acetonitrile with 1% formic acid): from 0% B to 20% B for the first 20 min, to 21% B over the next 8 min, maintained at 21% B for 2 min, and then to 30% B over the next 10 min, and to 100% over the next 5 min, and finally maintained at 100% B for 5 min. The flow rate was 1 mL/min and the column temperature was 30 °C. Spectra from all peaks were recorded in the 200–600 nm range and the chromatograms were acquired at 360 nm. The quantification of individual phenols was performed using an eight-point regression curve in the range of 0–250 μg on the basis of standards.
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8

Quantification of Tocopherol Isomers by HPLC

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The chromatographic determination of tocopherols was performed on a HPLC system including a Perkin Elmer (Norwalk, CT, USA) 200 Series pump equipped with a Perkin-Elmer 650-10S fluorescence detector, Jasco LC-Net II/ADC (Oklahoma City, OK, USA) communication module and ChromNAV Control Center software. The analysis was carried out according to Calvo et al. (2011) : a LiChrosorb Si60-5 C18 column 250 mm × 4.6 mm, 5 μm (Supelco, Bellefonte, PA, USA) was used, the injection volume was 20 μL, and the mobile phase was hexane:isopropanol:ethanol (98.5:1:0.5). Fluorescence detector was set at 290 nm excitation and 330 nm emission wavelengths.
α-, γ- and δ-tocopherols were identified by comparing retention times with those of commercial standards. Results were expressed as mg/100g of dry sample for each tocopherol.
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9

Quantifying Root Carboxylate Exudation

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Exudates were collected from the total root system of each plant following the methodology described in Delgado et al. (2014) (link). Briefly, the roots were washed with tap water, incubated in CaSO4 (0.2 mM) and shaken for 2 h. Subsequently, the solution was filtered, to avoid the presence of microorganisms, with a sterile syringe containing a filter of 0.22 μm. The liquid samples containing the exudates were frozen at −20°C and then lyophilized using a freeze-dryer (Model FD8508, Bondiro, Ilshin Lab, Co. Ltd., Korea). Finally, lyophilized samples were re-suspended in water for high-performance liquid chromatography (HPLC) and quantified using HPLC equipment (JASCO, LC-Net II/ADC, Tokyo, Japan) following the protocol described by Delgado et al. (2013) (link). Citrate, malate, oxalate, and succinate were used as standards. These determinations were carried out at the Institute of Agroindustries of the Universidad de La Frontera, Temuco. The values were expressed as a rate of carboxylates exuded per gram of fresh weight (FW) per hour (μmol g–1 FW h–1). The exudates from six seedlings per species grown in the different substrates were analyzed.
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10

Cellulase-Mediated Saccharification of Biomass

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Saccharification used 1 g of substrate and 0.5 g of cellulase (AC 40, HBI Enzyme, Hyogo, Japan) in 100 mL of citric acid buffer solution at pH 4.5. The reaction proceeded for 72 h with the sample incubated at 50 °C with stirring at 1000 rpm. The amount of glucose produced was determined by high-performance liquid chromatography (HPLC). The HPLC system (LC Net-II/ADC, Jasco, Tokyo Japan) consisted of a refractive index (RI) detector (RI-2031 Plus, Jasco), a HPLC pump (PU-970, Jasco), a three-line degasser (DG-980-50, Jasco), a column oven (CO-965, Jasco), and an NH 2 column (Asahipak NH2P-50G; 5 µm, 4.6 × 250 mm; Showa Denko, Tokyo Japan) connected with a guard column (NH2P-50G 4A, Showa Denko). The oven temperature was set at 40 °C. The mobile phase consisted of 75% acetonitrile (Wako first grade, Wako Pure Chemical Industries) and 25% ion-exchanged water; its flow rate was fixed at 1 mL/min. The total analysis time was 20 min. The glucose yield (g/g) was calculated as the amount of glucose produced per gram of substrate.
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