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16 protocols using mito tempo

1

Liver Ischemia-Reperfusion Injury Model

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As mentioned previously,7 (link)17 (link) a stable mouse model was established using 70% partial hepatic heat IR. Mice were anesthetized and a laparotomy was performed to expose the liver. The left and middle branches of the intrahepatic portal vein were clamped to block the blood supply. The clips were released for reperfusion after 90 minutes of ischemia. The sham mice underwent the same procedure but without clamping the blood vessels. The mice were sacrificed 6 hours after reperfusion, and liver and blood samples were collected for analysis.
To study the effects of ER stress, Control and HFD-fed mice were injected with tauroursodeoxycholic acid (TUDCA) i.p. (400 mg/kg) or PBS (Control) for 3 days, and then the model of liver IR was established.
To determine the role of mitochondrial oxidation, Control and HFD-fed mice were pretreated with the mitochondria-targeted antioxidant Mito-TEMPO (5 mg/kg, MedChemExpress, HY-112879) twice at 17 hours and 1 hour before surgery or PBS.
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2

Investigation of Redox Signal Origins

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To investigate the origin of redox signals, various inhibitors such as sodium diethyldithiocarbamate, GKT136901 (Sigma‐Aldrich, MO, USA), Mito‐tempo (MedChemExpress, NJ, USA), FCCP, oligomycin, rotenone and antimycin A (Agilent, CA, USA), and Batimastat (Selleckchem, Seoul, South Korea) were used as inhibitors. All of the inhibitors were incubated for 24 h at 37 °C. Furthermore, the cells were treated with CPI‐613 (MedChemExpress, NJ, USA) for drug screening and incubated for 24 h at 37 °C. After treatment, the cells were washed with DPBS for EC detection within 30 s and cytotoxicity testing.
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3

Simulating Pyroptosis in Pulpitis

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mDPC6T cells stimulated with LPS and ATP were utilized to simulate the pyroptosis during the pulpitis pathological process. In detail, mDPC6T cells were first primed with 1 μg/mL LPS (#LPS25, Sigma Aldrich) for 24 h, followed by treatment with 2 mM ATP (#HY‐B2176, MedChemExpress) for 24 h (referred to as LA‐mDPC6T). To inhibit mitochondrial OS, mDPC6T cells were pre‐treated with 5 μM MitoTEMPO (#HY‐112879, MedChemExpress) or 2 μM NAC (#HY‐B0215, MedChemExpress) for 4 h prior to stimulation with LPS and ATP. To inhibit mitochondrial transfer and tunnelling nanotube (TNT) formation, cells were pre‐treated with 1 μM cytochalasin B (HY‐16928, MedChemExpress) for 6 h to interfere polymerization and interaction of actin. For signalling pathway inhibition, cells were pre‐treated with 1 μM NF‐κB inhibitor Bay 11‐7082 (#HY‐13453, MedChemExpress) or 5 μM IKKβ inhibitor ML120B (#HY‐15473, MedChemExpress) for 4 h before experiments. To generate the mBMSCs without the mitochondrial function (ρomBMSCs), cells were cultured in a medium additioned with 1 μg/mL ethidium bromide (15585011, Invitrogen), 100 μg/mL pyruvic acid (HY‐Y0781, MedChemExpress) and 50 μg/mL uridine (HY‐B1449, MedChemExpress) for at least 1 month. For the TNF‐α treatment, the mBMSCs were treated with different concentrations of mouse TNF‐α (#HY‐P7090, MedChemExpress) for 24 h.
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4

P. gingivalis Infection Model in OCCM-30 Cells

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P. gingivalis, strain ATCC 33277, was maintained in the brain heart infusion broth, with supplement of yeast extract (1 mg/ml), hemin (5 mg/ml) and menadione (1 mg/ml) in an anaerobic condition (85 % N2, 5 % H2, and 10 % CO2) at 37 °C. Bacterial levels were normalized using a spectrophotometer (SpectraMax M3, USA) to an optical density (OD) of 1 at 600 nm, equivalent to 109 CFU/ml [25 (link)]. P. gingivalis infected OCCM-30 cells at the exponential growth phase with varying multiplicity of infection (MOI = 30, 100 and 300) as detailed in the figure captions.
Mito-Tempo (MedChemExpress, USA), the mtROS scavenger, MCC950 (MedChemExpress, USA), the selective NLRP3 inhibitor, and SC75741 (Selleck, USA), the nuclear factor-kappa B (NF-κB) inhibitor were used at the concentration of 100 μM or 5 μM respectively for 2 h before the experiment.
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5

Mitochondrial Dysfunction in Cigarette Smoke-Induced Lung Injury

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PM2.5 (SRM1649b) was obtained from NIST (MD, USA). Cigarettes were purchased from Hongta Tobacco (Group) Co., Ltd. (Yunnan, China). GKT137831 and mito-TEMPO were obtained from Med Chem Express (New Jersey, USA). Specific antibodies against Nrf2 (ab137550), p-mTOR (ab109268), SIRT3 (ab189860), VCAM (ab174279), ICAM (ab179707) and β-actin (ab8226) were purchased from Abcam (Cambridge, UK). Specific antibodies against caspase3 (9662S), Bax (5023S), Bcl2 (3498S), cleaved caspase-3 (9664S), Drp1 (8570S), AIF (4642), Cyto-c (4272), LC3B (2775S), P62 (5114S), ATG3 (3415), Tom20 (42406S), and Parkin (4211S) were purchased from Cell Signaling Technology (Danvers, USA). A specific antibody against PINK1 (P0076) was provided by Sigma–Aldrich (St. Louis, MO, USA). Specific antibody against NOX4 (Cat NO.380874) and MUC5ac (Cat NO.381811) were obtained from ZENBIO (Nanjing, China). Specific antibodies against Tim23 (Cat No.11123-1-AP) and p-creb (Cat No.28792-1-AP) were obtained from Proteintech (Chicago, USA). The BCA protein assay kit (lot # tk274307, USA) was obtained from Thermo Fisher Scientific. NOX4 siRNA was obtained from HanBio Technology (Shanghai, China). Cell Counting Kit-8 (CCK-8) and LDH kits were obtained from Beyotime (Shanghai, China).
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6

Cellular Senescence and Oxidative Stress Modulation

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The primary antibodies included anti-vWF (Santa Cruz, #sc-365712), anti-COL 1A1 (Proteintech, #14695-1-AP), anti-progerin (Santa Cruz, #sc-81611), anti-Lamin A/C (Cell Signaling Technology, #4777S), anti-Lamin B1 (Proteintech, #66095-1-Ig), anti-SIRT1 (Abcam, #ab110304), anti-LC3B (Abcam, #ab48394), anti-acetyl Lysine (Abcam, #ab22550), anti-Caveolin-1 (Cav-1) (Abcam, #ab32577), anti-Histone H3 (Proteintech, #17168-1-AP), and anti-GAPDH (Proteintech, #60004-1). The secondary antibodies included Cy3-labeled goat anti-mouse IgG (H+L) (Beyotime, #a0521), FITC-labeled goat anti-rabbit IgG (H+L) (Beyotime, #a0562), HRP-conjugated Affinipure Goat Anti-Mouse IgG(H+L) (Proteintech, #SA00001-1), and HRP-conjugated Affinipure Goat Anti-Rabbit IgG(H+L) (Proteintech, #SA00001-2).
The reagents used included carbon tetrachloride (CCl4) (Sigma-Aldrich, #56-23-5), hydrogen peroxide (H2O2) (Sigma-Aldrich, #1.07298), N-Acetylcysteine (NAC) (MedChemExpress, #616-91-1), mitochondria 2,2,6,6-tetramethylpiperidinooxy (mito-TEMPO) (MedChemExpress, #1334850-99-5), 3-Methyladenine (3-MA) (Sigma-Aldrich, #S2767), rapamycin (sirolimus) (Sigma-Aldrich, #S1039), MCDB131 (Gibco, #10372019), 1640 (Gibco, #11875101), and fetal bovine serum (FBS) (Biological Industries, #04-007-1A).
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7

Investigating Aryl Hydrocarbon and Pregnane X Receptor Modulation

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Chemicals, among them, indolepropionic acid (IPA), glutathione (GSH), N-acetyl-cysteine (NAC), Mito-TEMPO, and ketoconazole were from Sigma-Aldrich (St. Louis, MO, USA) unless otherwise stated. IPA was used, 0.4 μM and 0.8 μM, which corresponds to the normal human serum concentration of IPA [40 (link),49 (link),50 (link)]. GSH and NAC antioxidants were used at a final concentration of 5 mM. The mitochondria-targeted antioxidant Mito-TEMPO was used at a concentration of 5 μM. The aryl hydrocarbon receptor (AHR) inhibitor, CH223191, was obtained from MedChemExpress (MCE, Monmouth Junction, NJ, USA) and was applied at a concentration of 10 μM. Pregnane X receptor (PXR) downstream signaling was inhibited using ketoconazole at a final concentration of 25 μM [51 (link),52 (link)]. The Silencer Select siRNAs targeting AHR (AHR—siRNA ID: s1198) and PXR (NR1I2—siRNA ID: s16910) and the negative control siRNA #1 (cat.no. 4390843) were obtained from Thermo Fisher Scientific (Waltham, MA, USA) and each was used at a final concentration of 30 nM.
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8

AML Cell Line Profiling and Treatments

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MOLM-14 and OCI-AML2 human AML cell lines were short-tandem repeats (STR) profiled periodically by PCR-single-locus-technology (Promega, PowerPlex21 PCR Kit, Eurofins Genomics, Luxembourg). Doxycycline (1 µg/mL) was from Sigma-Aldrich (Saint Louis, MO, USA). Mitotempo and MYLS22 were from MedChem Express (Monmouth Junction, NJ, USA).
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9

CVB3-Induced Myocardial Injury Protocol

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CVB3 used in this study was derived from the infectious cDNA copy of the cardiotropic Nancy strain and maintained at the Key Laboratory of Viral Heart Diseases, Zhongshan Hospital, Shanghai Medical College of Fudan University. Virus titer was routinely determined prior to infection by a 50% tissue culture infectious dose (TCID50) assay of Hela cell monolayer.
MCC950 (Catalog no.: HY-12815), Mito-TEMPO (Catalog no.: HY-112879), and PD151746 (Catalog no.: HY-19749) were purchased from MedChemExpress (America, New Jersey) and dissolved as per the manufacturer’s instructions. The concentrations of the drugs used in this study were as follows: MCC950, 10 mg/kg i.p. daily for 6 days; Mito-TEMPO, 0.7 mg/kg i.p. daily for 6 days; PD1517446, 20 μmol/L; Mito-TEMPO, 10 nM for cells.
The cell counting kit-8, enhanced ATP assay kit, and mitochondrial membrane potential assay kit with JC-1 were purchased from Biyotime (China). Cardiomyocytes isolation kit, DHE (Dihydroethidium) assay kit, Lipofectamine™ RNAiMAX, and MitoSOX™ red mitochondrial superoxide indicator were purchased from Invitrogen (America). Mitochondria isolation kit for tissue or cultured cells was purchased from Abcam (America). ELISA kit for mouse creatine kinase-MB (CK-MB), lactate dehydrogenase (LDH), cardiac troponin I (cTnI), IL-18, and IL-1β were purchased from MULTI SCIENCES (China).
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10

Necroptosis Inhibition Assay

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GSK’872, BAY 11–7082, and MITO-TEMPO were purchased from Medchem Express (USA). Necrostatin-1 (NEC-1) and RBC lysing buffer were from Sigma-Aldrich (USA). Antibodies against RIPK3, RIPK1, p-P65, and actin were from Cell Signaling Technology and Abcam. RIPK3, RIPK1 and p-P65 were diluted at 1:1000 and actin were at 1:2500. Goat anti-Mouse and Goat anti-Rabbit secondary antibodies (diluted at 1:2500) were from Erath. Recombinant mouse M-CSF were from R&D Systems.
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