The largest database of trusted experimental protocols

Iblot dry transfer system

Manufactured by Thermo Fisher Scientific
Sourced in United States

The IBlot dry transfer system is a laboratory equipment used for the rapid and efficient transfer of proteins from polyacrylamide gels to membranes. It utilizes a patented dry transfer technology to simplify the blotting process, eliminating the need for wet or semi-dry transfer methods.

Automatically generated - may contain errors

49 protocols using iblot dry transfer system

1

Quantifying Protein Expression in Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Patient PBMCs were lysed in RIPA buffer supplemented with cOmplete™ Protease Inhibitor Cocktail (Roche) and PhosSTOP (Roche) on ice. Protein concentration was determined using DC protein assay (Bio-Rad Laboratories) and samples prepared in 1x NuPage loading buffer (Invitrogen™) with 1x NuPage Sample Reducing Agent (Invitrogen™). Samples were run on NuPage Bis-Tris 4-12% (Invitrogen™) and NuPage Tris-Acetate 3–8% (Invitrogen™) gels and transferred using iBlot dry transfer system (Invitrogen™). Membranes were blocked 1h at RT using 5% bovine serum albumin or milk in PBSt 0.1% Tween-20 and primary antibody incubated over-night at 4°C, ENO1 (Abcam, #ab155102), ENO3 (Abcam, #ab126259), HIF-1α (BdBioscience, #610959), Akt (Abcam, #ab2771), Akt(S473) (Abcam, #ab81283), mTOR (Abcam, #ab32028), mTOR(S2448) (Abcam, #ab109268), S6K1 (Abcam, #ab32529), S6K1(T389 + T412) (Abcam, #ab60948), 4EBP1 (Abcam, #ab32024), 4EBP1(T37) (Abcam, #ab75767), or β-Actin (Sigma-Aldrich, #A5441). The secondary antibody (Dako, Aglient) was incubated 1h at RT prior detection using Amersham ECL/ECL select (GE Healthcare). Relative protein quantification was analysed using ImageLab version 6.0.1 (Bio-Rad Laboratories), results analysed using Mann-Whitney U-test or unpaired t-test and visualized using Prism 8.4.3 (GraphPad Software) (significance level, p<0.05).
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lysates were collected in 1% NP-40, 150 mM NaCl, 50 mM Tris-HCl pH 8.0,
10% glycerol, 0.1% SDS, and 0.5% Na-deoxycholate supplemented with the protease
and phosphatase inhibitor HALT (Thermo Fisher Scientific). Pre-aliquoted SDS and
DTT from New England Biolabs (B7703) were added to the lysate, and proteins were
denatured at 100˚C for five minutes. Proteins were then separated by
SDS-PAGE and transferred to a nitrocellulose membrane via either the iBlot dry
transfer system (Invitrogen) or overnight at 30 V in transfer buffer containing
10% MeOH and 1× Tris-Glycine. Antibody binding was detected using the
LI-COR Odyssey IR imaging system (LI-COR Biosciences).
+ Open protocol
+ Expand
3

NLRP3 Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole spinal cord from Ipsilateral T13/L1 was sonicated in a mixture containing extraction buffer (Invitrogen) and protease inhibitors (Sigma). Ice-cold tissue samples were centrifuged at 14,000 rpm for 10 min at 4°C. The supernatant was removed, and the protein concentration for each sample was quantified using the Bradford method. Samples were heated to 75°C for 10 min and loaded into a standard polyacrylamide Bis-Tris gel (Invitrogen). SDS-PAGE was performed in 3-(N-morpholino)-propanesulfonic acid running buffer (Invitrogen) at 175 V for 1.25 h. Protein was transferred onto a nitrocellulose membrane using the iblot dry transfer system (Invitrogen). The membrane was blocked with Odyssey blocking buffer (LI-COR Biosciences) for 1 h and incubated with a primary antibody in blocking buffer overnight at 4°C. The following day, the membrane was washed in 1× PBS containing Tween 20 (0.1%) and then incubated in blocking buffer containing either goat anti-rabbit (NLRP3) or goat anti-mouse (B-actin) (LI-COR) IRDye 800CW secondary antibody at a concentration of 1:10,000 (LI-COR) for 1 h at room temperature. Protein expression was quantified using an Odyssey Infrared Imager (LI-COR) and expressed as a ratio to their housekeeping protein. Primary antibodies included rabbit anti-rat NLRP3 monoclonal antibody (1:1000; Abcam), and mouse anti-rat β-actin (1:200,000; Sigma-Aldrich).
+ Open protocol
+ Expand
4

SDS-PAGE and Immunoblotting for Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein samples were resolved by SDS–PAGE on NuPAGE Novex 4–12% Bis-Tris gels (ThermoFisher Scientific) with NuPAGE MOPS SDS Running buffer (ThermoFisher Scientific), or with NuPAGE MES SDS Running buffer (ThermoFisher Scientific) to improve resolution when monitoring unattached ubiquitin chains (Supplementary Figure S4) or ubiquitylated HIF1A peptide (Figure 2C). The resolved proteins were transferred onto a nitrocellulose iBlot membrane (Invitrogen, IB301031) with the iBlot Dry Transfer System (Invitrogen, Serial No.10063176). Immunoblotting was performed with the antibodies shown in Supplementary Table S1. Detection was carried out with the ECL Western Blotting Detection Reagent kit (GE Healthcare, RPN 2106). The chemiluminescent signal was captured on Hyperfilm ECL film (Amersham, GE Healthcare, 28906837) and developed with an ECOMAX X-Ray Film Processor (Protec).
+ Open protocol
+ Expand
5

SDS-PAGE and Western Blotting Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein samples were resolved by SDS–polyacrylamide gel electrophoresis on NuPAGE Novex 4–12% Bis-Tris gels (NP0321 and WG1402A, ThermoFisher Scientific) with NuPAGE MOPS SDS buffer (NP0001, ThermoFisher Scientific), or NuPAGE Novex 3–8% Tris-Acetate gels (EA0375BOX and WG1602BOX, ThermoFisher Scientific) with NuPAGE Tris-Acetate SDS buffer (LA0041, ThermoFisher Scientific). Resolved proteins were either stained with colloidal Coomassie blue dye (‘Instant Blue’, Expedion), or were transferred onto a nitrocellulose iBlot membrane (Invitrogen) with the iBlot Dry Transfer System (Invitrogen).
Antibodies used for protein detection in this study are described in Appendix 1-key resources table. Conjugates to horseradish peroxidase of anti-sheep IgG from donkey (Sigma, A3415), anti-rabbit IgG from donkey (GE Healthcare, NA934), or anti-goat IgG from rabbit (Sigma, A5420) were used as secondary antibodies before the detection of chemoluminescent signals on Hyperfilm ECL (Amersham, GE Healthcare) using ECL Western Blotting Detection Reagent (GE Healthcare).
+ Open protocol
+ Expand
6

Extraction and Blotting of Histone and Non-histone Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins for histone blots were harvested using acid extraction (see Supplemental Experimental Procedures). Proteins for non-histone protein blots were harvested using RIPA-buffer including cOmplete mini protease inhibitor cocktail (Roche) and, for phospho-blots, phosSTOP phosphatase inhibitor (Roche), according to the manufacturer's instructions. Protein was separated on a 10% Bis-Tris Gel (Nupage; Invitrogen) and blotted using the “iblot” dry transfer system (Invitrogen).
+ Open protocol
+ Expand
7

Protein Extraction and Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Strains were grown to mid-log phase and equivalent volumes were harvested or starved for glucose with raffinose treatment prior to harvesting. Cells were treated to 0.2 N NaOH for 5 min prior to resuspension in lysis buffer (8 M urea, 10% glycerol, 50 mM Tris-HCl pH 6.8, 5% SDS, 0.1% Bromophenol Blue and 10% 2-mercaptoethanol). SDS-PAGE was used to resolve proteins which were then transferred to a nitrocellulose membrane using the iBlot dry transfer system (Invitrogen). Ponceau S strain was used to confirm successful transfer and equal loading. Membranes were probed with antibodies stated, details as listed in Table S3, and visualised using enhanced chemiluminescence (ECL) Super Signal Pico Plus (Thermo Fisher Scientific) and captured using a ChemiDoc Imager (Bio-Rad).
+ Open protocol
+ Expand
8

Western Blotting of Brain Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein was extracted from pulverized brain powder, prepared as described above, and quantified using the BCA protein assay kit (Thermo Scientific, Rockford, IL), according to manufacturer's instructions. 30μg protein samples from each lysate were run on a denaturing 4-20% SDS-PAGE gel. The gel was transferred onto a nitrocellulose membrane using the iBlot dry transfer system (Invitrogen, Carlsbad, CA), and Western blots were performed for CD86 (mouse anti-human CD86, 1:3000, BD Biosciences, San Jose, CA) or CD64 / FcgR1 (mouse anti-human CD64, 1:1000, BD Biosciences, San Jose, CA) as described previously (Wilcock, et al., 2008 (link)). The blots were stripped using Restore stripping buffer (Thermo Scientific, Rockford, IL) and re-probed using the above protocol for β-actin (Rabbit anti-β-actin, 1:10, 000, Cell Signaling Technology, Danvers, MA). The blots were imaged on the Odyssey imager and semi-quantitative densitometry analysis was performed using the Odyssey Imaging Software (Licor, Lincoln, NE).
+ Open protocol
+ Expand
9

Western Blot Analysis of Protein Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were heated to 75°C for 10 min then loaded into a standard polyacrylamide Bis-Tris gel (Invitrogen). SDS-PAGE was performed in MOPS running buffer (Invitrogen) at 175 V for 75 min. Protein was transferred onto a nitrocellulose membrane using the iBlot dry transfer system (Invitrogen). The membrane was blocked with Odyssey blocking buffer (LI-COR) for 1 h and incubated with a primary antibody in blocking buffer overnight at 4°C. The following day, the membrane was washed in 1× PBS containing Tween 20 (0.1%) and then incubated in blocking buffer containing either goat anti-rabbit or goat anti-mouse (LI-COR) IRDye 800CW secondary antibody at a concentration of 1:10,000 for 1 h at room temperature. Primary antibodies included the following: mouse anti-rat high-mobility group box 1 (HMGB1) monoclonal antibody (1:4000; Abcam); rabbit anti-rat nod-like receptor protein 3 (NLRP3) monoclonal antibody (1:1000; Millipore); and mouse anti-rat β-actin (1:200,000; Sigma-Aldrich). Protein expression was quantified using an Odyssey Infrared Imager (LI-COR) and normalized to the housekeeping protein value for that sample, and data are presented as the percentage of the within-blot regular diet control samples.
+ Open protocol
+ Expand
10

Western Blot Protein Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole cell extracts were created by lysing cell pellets with RIPA buffer (Boston BioProducts, Ashland, MA) for 20 min on ice, and then lysates were cleared by centrifugation for 10 minutes at 15,000 rpm at 4°C. Samples were loaded onto NuPage 4–12% Bis-Tris gradient gels (Novex, Life Technologies, Grand Island, NY) and separated by electrophoresis in MOPS-SDS running buffer. Proteins were transferred to nitrocellulose membranes via the iBlot dry transfer system (Invitrogen, Life Technologies, Grand Island, NY). Blots were blocked for 1 hour at room temperature in 5% nonfat milk in PBS-Tween-20 (Westnet Inc., Canton, MA) and incubated in appropriate primary antibodies diluted in blocking buffer overnight at 4°C (Supplemental Table S1). Blots were then incubated in HRP-linked secondary antibody (GE Healthcare, Piscataway, NJ) at 1:4,000 dilution in blocking buffer. Proteins were detected using the ECL2 western blotting substrate kit (Thermo Fisher Scientific, Waltham, MA) and imaged with a FluorChem HD2 imager (Cell Biosciences, Santa Clara, CA). After initial development, membranes were re-probed with antibodies to β-actin (Sigma-Aldrich, St. Louis, MO) as a loading control.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!