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Pcdna3.1 hygro vector

Manufactured by Thermo Fisher Scientific
Sourced in United States

The PcDNA3.1/Hygro(+) vector is a plasmid vector commonly used in molecular biology research. It serves as a tool for the expression of genes of interest in mammalian cell lines. The vector includes a hygromycin resistance gene, which allows for the selection of successfully transfected cells.

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26 protocols using pcdna3.1 hygro vector

1

ACVR1-IPF Fusion Protein Generation

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The InversePericam FKBP1A (IPF) fusion protein was amplified by PCR from the pCS2+zALK3 IPF (Michel et al., 2011 (link)) and cloned in-frame downstream of the human ACVR1 cDNA sequence in the pcDNA3.1 Hygro (+) vector (Thermo Fisher). MDCKII and NIH-3T3 cells were transfected with the ACVR1-IPF construct and selected with 400 µg/ml hygromycin or 40 µg/ml hygromycin, respectively. After selection, cells were FACS sorted for GFP expression. MDCKII ACVR1-IPF cells were maintained as a pool, while a single clone was isolated for NIH-3T3 cells. To test the functionality of ACVR1-IPF, NMuMG cells knocked out for ACVR1 and BMPR1A were transfected with empty pcDNA3.1 Hygro (+), ACVR1-IPF or FLAG-ACVR1 (Daly et al., 2008 (link)) as a positive control, and activity was monitored by their ability to induce phosphorylation of SMAD1/5.
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2

Src Mutant Plasmid Constructs for Cell Studies

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SFK-Src R388A/Y527F (Src-R/A) and SFK-Src D386N/Y527F (Src-D/N) encoding plasmid constructs were kindly provided by Dr. Philip A. Cole (The Johns Hopkins University, Baltimore) (21 (link)). They were subcloned into pcDNA3.1/Hygro (-) vector (Thermo Fisher Scientific, Grand Island, NY) and stably transfected in HEK293 cell or SW480 cells (ATCC, Manassas, VA).
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3

Measuring Amyloid-Beta Secretion

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We used a previously constructed APPswe plasmid [24 (link)], which contains human APP695 with the Swedish (KM595/596NL) mutation cloned into pcDNA3.1/Hygro(+) vector (Thermo Fisher Scientific). Cells were transfected with the APPswe plasmid, and stably expressing cells were selected by using hygromycin. Before the ELISA, cells were plated on 6-well culture plates at a density of 4.0 × 105 cells/well and cultured in DMEM for 24 h. We used a human β-amyloid ELISA kit (Wako) to measure the amounts of Aβ40 and Aβ42 secreted into the culture medium. Each experiment was independently conducted three times, with 12 replicates for each sample. The ratio of Aβ42 to Aβ40 was calculated on the basis of the average of the replicates.
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4

Recombinant ASPH Expression in Mammalian Cells

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To achieve recombinant ASPH in
mammalian systems, the pcDNA3.1/Hygro(+) vector (Thermo Fisher Scientific,
Waltham, MA) containing mammalian cytomegalovirus (CMV) was implemented.
This plasmid also involves the Hygromycin resistance gene (Hygromycin-B-phosphotransferase)
as the selectable marker of stable transfectants in mammalian cells
and the Ampicillin resistance gene (β-lactamase) as the selectable
marker of the vector in the properly transformed Escherichia
coli
strains. A modified cDNA of ASPH (NCBI Accession
Number: NM_004318) containing the C-terminal 6-His tag coding sequence
before the stop codon and the Kozak consensus sequence (ACC ATGG)
just before the start codon was designed before being synthesized
and cloned into the vector by General Biosystems, Inc. (Morrisville,
NC) to give the pcDNA3.1/Hygro(+)-ASPH expressing the 2310 bp NheI to XhoI fragment just after the CMV
and T7 promoter.
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5

Expression and Validation of IE2 Protein

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The ORF of IE2 was first amplified from cDNA of infected HFF (24 h p.i.) using an iProof polymerase kit (Biorad). Restriction sites (BamHI/XbaI containing primers) were added in a second PCR step to the resulting amplicon for subsequent insertion into the pcDNA3.1/Hygro(+) vector (Thermofisher Scientific). Sequence identity of the insert with the AD169 IE2 CDS (NCBI FJ527563.1) was confirmed by Sanger sequencing of both the forward and reverse strand.
HEK293 cells were transfected with 850 ng of pcDNA-IE2 or empty vector control plasmid in 24-well plates using 2 μL Turbofect (Thermofisher Scientific) according to the manufacturer’s instructions. Two days post transfection, lysates were harvested for analysis via Western blot.
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6

Molecular Tagging of Murine Testis Proteins

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Open reading frames encoding C11orf94, Izumo1, SOF1, SPACA6, and ACE3 were amplified by PCR from murine testis cDNA and equipped with C-terminal 3xFLAG, (3x)myc, or HA tags, respectively. Coding sequences were inserted into the pcDNA3.1 hygro+ vector (Thermo Fisher Scientific) using Hind III and Xho I (C11orf94, SPACA6, and Izumo1) or Bam HI and Xho I (SOF1 and ACE3) restriction sites. For analysis of the membrane topology of C11orf94, an artificial NIS motif was added to the N or C terminus of the protein, respectively. Plasmids encoding NotchΔE-eGFP (53 (link)), mSPPL2c-myc, and mSPP-myc and the catalytically inactive mSPPL2c D457A variant (20 (link)) have been described previously. The mutations D395A and F455L were introduced into the SPPL2c-coding sequence by site-directed mutagenesis, and the resulting open reading frames were ligated into the pcDNA hygro+ expression vector using Bam HI and Not I sites. For propagation of plasmids, Escherichia coli XL1-Blue cells (Stratagene) were used.
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7

Stable Expression of Taste Receptors

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The Tas2r108 (NM_020502.1) and Tas2r126 (NM_207028.1) sequences with the bases that encode 45 amino acids of rat somatostatin receptor 3 [22 (link)] and HSV glycoprotein epitope tag attached at their 5′ and 3′ ends, respectively, were cloned into a pcDNA™3.1/Hygro(+) vector (Thermo Fisher Scientific Inc., Waltham, MA, USA). The vector was transfected into 3T3-L1 preadipocytes using Lipofectamine 3000 reagent (Thermo Fisher Scientific Inc.) and Opti-MEM™ I reduced serum medium (Thermo Fisher Scientific Inc.). Three days after transfection, hygromycin B (0.5 mg/mL) was added to the medium and the cells were selected for 1 week. The selected cells were used for the experiments.
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8

Overexpression of SERPINB1 in C4-2 Cells

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Human SERPINB1 was cloned via nested PCR. SERPINB1 cDNA was inserted into pcDNA3.1/Hygro(+) vector (Invitrogen). C4-2 cells were transfected with SERPINB1-pcDNA3.1/Hygro(+) or empty vector using X-tremeGENE 9 DNA Transfection Reagent (Sigma) and selected with 100 μg/mL hygromycin (Sigma). Monoclonal cell lines were established and maintained in 10% FBS and 1% P-S in RMPI-1640 containing 25 μg/mL hygromycin.
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9

Generating Caspase-8, Plk3, and CD95 Constructs

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Primer sequences used here will be provided upon request. Deletion fragments of CD95, Plk3 and procaspase-8 were generated by standard techniques. Site-directed mutagenesis was performed using the QuikChange protocol and PfuUltra II Fusion HS DNA polymerase (Stratagene). Procaspase-8-WT, its subfragments (NT, p18, p10) and its mutants were inserted into the HindIII/XbaI sites of the pGEX 5X-3 vector (GE Healthcare). 3 × Flag-tagged procaspase-8-WT and its mutants (T273A, -T273D) were inserted into the BamHI/XbaI sites of the pcDNA3.1-V5 vector (Invitrogen). Plk3-WT and its subfragments were inserted into the BamHI and EcoRI sites of the Myc-, V5- or 3xFlag-tagged pcDNA3.1-Hygro+ vector (Invitrogen) and the pGEX 5X-3 vector. All constructs were confirmed by sequencing.
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10

Dual Promoter Reporter Plasmid

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A pNIS-FL2-TurboFP635-pCMV-Rluc plasmid DNA expressing the reporter gene driven by dual promoters was established by Cosmo Genetech Co. Ltd. (South Korea) using pNIS-FL2-TurboFP635 and pcDNA3.1/Hygro (+) vectors. pNIS-FL2-TurboFP635 vector was a kind gift from Dr. Abhijit De, ACTREC, India. pcDNA3.1/Hygro (+) vector was purchased from Invitrogen (Carlsbad, CA, USA). For monitoring NIS promoter/enhancer, the downstream region (clockwise) of NIS promoter included the gene for firefly luciferase (Fluc) and TurboFP635. Cytomegalovirus promoter with Renilla luciferase (Rluc) gene was placed in the opposite direction (anti-clockwise) of NIS promoter region to evaluate cell viability. The details of vector diagram are indicated in Supplementary Figure 1.
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