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15 protocols using total akt

1

Western Blotting Analysis of Cell Signaling

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For Western blotting analysis, the cells were harvested and lysed on ice for 30 min in RIPA buffer supplemented with protease inhibitors (100 mM Tris-HCl at pH 7.4, 150 mM NaCl, 5 mM EDTA, 1% Triton X-100, 1% deoxycholate acid, 0.1% SDS, 2 mM phenylmethylsulfonyl fluoride, 1 mM sodium orthovanadate, 2 mM DTT, 2 mM leupeptin, 2 mM pepstatin). Cells lysates were centrifuged at 12,000 rpm for 15 min, and the supernatants were collected as total proteins. After the concentrations of protein samples were determined by the BCA method (Beyotime, Haimen, China), equal amount of each sample was separated by SDS-PAGE and transferred onto PVDF membranes. Membranes were blocked with 5% nonfat dried milk solution for 2 h and incubated with primary antibodies, respectively. The antibodies used were against CAV2, FGF7, Bcl2, phospho-AKT, total AKT (Abcam, Cambridge, MA) and β-actin (Boster Bio Tec, Wuhan, China). After washing three times with PBST, the membranes were incubated with HRP conjugated secondary antibody and visualized with an ECL detection system. Protein expression was measured by ImageJ software. The pictures of un-cut gels were shown in Supplementary file.
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2

Inhibition of DNMT1 and SP1 signaling

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Monoclonal antibodies against DNMT1 and SP1 were purchased from Cell Signaling Technology Inc. (Beverly, MA, USA). The PDPK1, GAPDH, total Akt and the phosphor‐form (Ser473) antibodies were obtained from Abcam (Cambridge, MA, USA). MET was purchased from Enzo (Grand Island, NY, USA), MTT powder was obtained from Sigma‐Aldrich (St. Louis, MO, USA), Cell Proliferation ELISA and BrdU (colorimetric) Kits were obtained from Roche (Basel, Switzerland). Control (pCMV6‐AC or pCMV6‐GFP), DNMT1, PDPK1 and Akt overexpression plasmids and PDPK1 promoter constructs were purchased from OriGene Technologies (Rockville, MD, USA). BBR was purchased from Chengdu Must Bio‐technology Company (Chengdu, Sichuan, China). Agents were dissolved with DMSO, and freshly diluted to the working concentration with medium before use.
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3

Western Blot Analysis of Cancer Cell Signaling Pathways

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For Western blotting, the total protein lysate from the cancer cells was prepared, separated by SDS-PAGE and transferred to a PVDF membrane (Millipore, Billerica, MA, USA). The membranes were blocked with 5% nonfat milk and incubated in the following primary antibodies at 4°C overnight: p21 (1:1000, CST, USA), PCNA (1:1000, CST), Bax (1:1000, CST), Bcl-2 (1:1000, CST), cleaved-caspase 3 (1:1000; CST), GAPDH (1:10,000; Abcam), phosphor-AKT (Ser473) (1:1000; Abcam), total-AKT (1:1,000; Abcam), phosphor-ERK1/2 (1:1,000; Abcam), and total-ERK (1:1000; Abcam). After the membranes were washed with TBST, they were incubated with HRP-conjugated secondary antibody (1:2,500; Abcam). The GAPDH levels were used as internal standards.
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4

Western Blot Analysis of Cancer Cell Signaling Pathways

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For Western blotting, the total protein lysate from the cancer cells was prepared, separated by SDS-PAGE and transferred to a PVDF membrane (Millipore, Billerica, MA, USA). The membranes were blocked with 5% nonfat milk and incubated in the following primary antibodies at 4°C overnight: p21 (1:1000, CST, USA), PCNA (1:1000, CST), Bax (1:1000, CST), Bcl-2 (1:1000, CST), cleaved-caspase 3 (1:1000; CST), GAPDH (1:10,000; Abcam), phosphor-AKT (Ser473) (1:1000; Abcam), total-AKT (1:1,000; Abcam), phosphor-ERK1/2 (1:1,000; Abcam), and total-ERK (1:1000; Abcam). After the membranes were washed with TBST, they were incubated with HRP-conjugated secondary antibody (1:2,500; Abcam). The GAPDH levels were used as internal standards.
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5

Immunofluorescence Analysis of Apoptosis and AKT Signaling in Oocytes

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Partially denuded COCs (20 oocytes per group) were fixed in 4% paraformaldehyde for 15 min then washed three times with PBS. Permeabilization was conducted by incubation with 0.5% Triton X-100 for 20 min followed by washing three times. Proteinase K was added, and plates were incubated for 5 min at room temperature before washing. Oocytes were incubated for 2 h at room temperature with blocking buffer (10% FBS and 3% BSA in PBS) before incubation overnight at 4 °C with the primary antibodies (diluted in 3% BSA and 0.1% Tween 20 in PBS). Antibodies targeting caspase 3 and caspase 9 (Santa Cruz Biotechnology, Santa Cruz, CA, USA), total AKT (Abcam), Phospho-AKT (Thr308 and Ser473; Cell Signaling Technology) have been used. After washing, fluorescein isothiocyanate (FITC)- and tetramethylrhodamine isothiocyanate (TRITC)-conjugated secondary antibodies (Santa Cruz Biotechnology; diluted 1:100 in PBS) were added and plates were incubated 90 min at room temperature. The nuclei were stained with DAPI for 10 min followed by washing three times. The stained oocytes were spotted on glass slides, visualized under a confocal laser-scanning Olympus Fluoview FV1000 microscope, yet the optical densities were determined using ImageJ.
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6

Smooth Muscle Cell Proliferation Assay

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PRF was obtained from Anhui Joyfar Pharmaceutical Co., Ltd, (Bozhou, China), while Dulbecco’s modified Eagle’s medium (DMEM)/F12 and fetal bovine serum (FBS) were purchased from Life Technologies (Carlsbad, CA, USA). Dimethyl sulfoxide (DMSO), MTT and recombinant human PDGF-BB were purchased from Sigma-Aldrich (St. Louis, MO, USA). Mouse anti-cyclin D1, proliferating cell nuclear antigen (PCNA), cyclin-dependent kinase (CDK) 4, α-SMA, desmin, smoothelin, phospho-protein kinase B (Akt), total Akt, phospho-ERK, total ERK, glyceraldehyde 3-phosphate dehydrogenase (GAPDH) antibodies and rabbit anti-mouse secondary antibodies were obtained from Abcam (Cambridge, UK).
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7

Assessing Insulin Signaling Pathway

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Streptozotocin, thiobarbituric acid (TBA), tetra methyl rhodamine methyl ester (TMRM),and dexamethasone were procured from Sigma (St. Louis, MO, USA). Antibodies such as phospho-IRS-1ser307, total IRS, phosphor-Aktser473, total Akt, and beta-actin were purchased from Abcam Plc., Cambridge, USA. All other chemicals and reagents were available commercially from local suppliers and were of analytical grade.
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8

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

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Cells and tissues were lysed using the Protein Extraction kit (Wanlei Biotechnology, Beijing, China). The proteins were separated by SDS-polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride (PDVF) membranes. The membranes were blocked with skimmed milk (5%, w/v). The membranes were probed with anti-E-cadherin (1: 2000; Abcam, Cambridge, MA, USA), anti-Vimentin (1: 3000; Abcam, Cambridge, MA, USA), anti-NUS1 (1: 2000; Abcam, Cambridge, MA, USA), p-AKT (1: 5000; Abcam), total-AKT (1: 2000; Abcam), p-IKKα (1: 2000; Abcam), total-IKKα (1: 2000; Abcam), total-p65 (1: 3000; Abcam), p-p65 (1: 2000; Abcam), and anti-GAPDH (1: 3000; Abcam) antibodies overnight at 4˚C. The membranes were washed with TBST and incubated with horseradish peroxidase-conjugated secondary antibody for 2 h and the immunocomplexes were then visualized using a New Super ECL Detection Kit (KeyGEN BioTECH, China) according to the manufacturer’s protocol.
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9

Kidney Protein Expression Analysis

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One part of the kidney tissue was homogenized in a radioimmunoprecipitation assay buffer (RIPA; Sigma-Aldrich, USA) containing 1% protease inhibitor cocktail and 2% phenylmethanesulfonyl fluoride (Sigma-Aldrich, USA). Protein concentrations were determined by the Bradford method, and 40 μg proteins were separated using 10% SDS-PAGE gel and transferred electrophoretically onto nitrocellulose membranes (0.45 μm; Bio Basic, Inc., USA). The transferred membranes were blotted with primary antibodies at 4°C overnight at a dilution of 1 : 1000: phosphor-AKT (ab131443), total-AKT (ab200195), phosphor-GSK-3β (ab75745), total-GSK-3β (#32391), and glyceraldehyde-3-phosphate dehydrogenase (#2118) (Abcam, Cambridge, UK) and then incubated with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz, USA). Chemiluminescence was detected using ECL detection kits (GE Healthcare, UK). The intensity of the bands was quantified by scanning densitometry using Image J software (National Institutes of Health, Bethesda, USA).
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10

Protein Expression Analysis of A498 and Renca Cells

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The A498 cells and Renca cells were collected for protein samples with NP40 solution. 25 μg protein samples were separated by SDS-PAGE, followed with transferring to PVDF membranes. Next, samples were examined by immunoblotting with primary antibodies against: α-SMA (1:1000, Abcam, Cambridge, UK), AhR (1:5000, Abcam, Cambridge, UK), phosphorylated-Src (1:500, Abcam, Cambridge, UK), total Src (1:500, Abcam, Cambridge, UK), phosphorylated AKT (1:500, Abcam, Cambridge, UK), total AKT (1:500, Abcam, Cambridge, UK), phosphorylated STAT3 (1:500 Abcam, Cambridge, UK), total STAT3 (Abcam, Cambridge, UK) and β-actin (1:1000, Abcam, Cambridge, UK) respectively at 4°C overnight. Then HRP-conjugated secondary antibody (1:1000, Abcam, Cambridge, UK) was incubated for 1 hour at room temperature, and visualized by using ECL detection kit (Thermo, MA, USA).
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