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Ez link sulfo nhs biotinylation kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

The EZ-Link Sulfo-NHS-Biotinylation Kit is a laboratory product designed for the biotinylation of proteins and other macromolecules. It utilizes sulfo-N-hydroxysuccinimide (sulfo-NHS) chemistry to covalently attach biotin to free primary amine groups on the target molecules.

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29 protocols using ez link sulfo nhs biotinylation kit

1

Purification and Characterization of IgM

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IgM antibody was purified from wild-type mouse serum. Large-scale purification was performed using a HiTrap Protein G column to remove IgG (Amersham Biosciences, Piscataway, NJ). Proteins were precipitated with polyethylene glycol (Sigma) and the product was run over a size exclusion column to isolate the IgM fractions. The purity of the isolated IgM was established by Coomassie staining and Western blot analysis. The IgM was biotinylated using a EZ-link Sulfo-NHS Biotinylation Kit (ThermoScientific) according to the manufacturer's instructions, and binding of the biotinylated IgM to mesangial cells was confirmed by flow cytometry. Monoclonal natural IgM hybridomas were generated from the B cells of C57BL/6 mice as previously described.34 (link) Mice were injected with 1 mg of purified polyclonal IgM or 100 μg of the IgM monoclonal antibodies intravenously by tail vein (N=3 for each antibody preparation). For mice injected with polyclonal IgM, urine and serum samples were collected at baseline and on days 1, 2, and 3 following injection. Kidney tissue was obtained on days 1 and 3. Mice injected with the IgM monoclonal antibodies were sacrificed after 24 hours and the kidney tissue was analyzed.
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2

Biotin-labelled Pgp3 ELISA Protocol

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Biotin-labelled Pgp3 was produced using the EZ-Link Sulfo-NHS-Biotinylation Kit (Thermo Scientific). Optimised assay conditions were determined by checkerboard titrations, as previously described [9 (link)]. Maxisorp microtitration plates (Nunc) were coated with unlabelled Pgp3 with bovine serum albumin (BSA) in carbonate buffer, pH 9.6 (Sigma) at 4°C. The protein-coated wells were blocked and stabilised by dilution buffer (PBS with 0.05% Tween-20 (PBST) (Sigma) with 1% Hammersten casein (GE Healthcare)) containing 5% sucrose (Sigma). Bound protein was incubated with either Pgp3 antibody-positive or negative defibrinated plasma [20 (link)] (25μl) diluted in dilution buffer (75μl) containing BSA at 37°C. After washing with PBST, biotinylated Pgp3 was added, incubated at 4°C, washed and incubated with horseradish peroxidase (HRP)-labelled streptavidin (Thermo Scientific). Finally, HRP activity was measured with TMB substrate (Biorad).
Assay cut-off was determined by receiver operating characteristic (ROC) analysis of absorbance (450–620nm) values on 505 paediatric samples and 342 samples from GUM patients, previously used to characterize our indirect ELISA [9 (link)]. As before, we determined specificity on the 494 samples from micro-immunofluorescence (MIF) assay-negative children [9 (link)].
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3

ENOX2 Protein Aptamer Selection

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Recombinant human ENOX2 protein (Creative Biomart, Shirley, NY, USA) was biotinylated using the EZ-Link Sulfo-NHS-Biotinylation Kit (ThermoFisher, Waltham, MA, USA). Biotinylated ENOX2 protein was then bound to magnetic streptavidin-coated beads, Dynabeads M-270 Streptavidin (ThermoFisher), all following manufacturer protocols. Bead-bound ENOX2 protein was used for aptamer selection in the X-Aptamer Selection Kit (AM Biotechnologies, Houston, TX, USA), following the manufacturer protocol [22 ] for positive selection (pull-down of library oligonucleotides that bind the bead-bound ENOX2), negative selection (pull-down of off-target oligonucleotides by non-ENOX2 functionalized beads), and in-solution selection (pull-down of oligonucleotides by non-bound biotinylated ENOX2), followed by bead capture and magnetic pull-down. Selected oligonucleotides were validated via PCR (Figure S1). Abundance and identity of unique sequences were determined via high-throughput sequencing; the most highly enriched sequence was 5′-TTT TTT AGA TCC CTG TTC ATC TGT CTC GAG TGT TCT TTA ATG ATC TTT TT-3′ [22 ] (AM Biotechnologies).
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4

Antibody Reactivity to HES and HF-treated HES

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Antibody reactivity to HES and hydrogen fluoride (HF)-treated HES was performed as described previously (Hewitson et al., 2011 (link)). For competition ELISA, plate bound HES was first incubated for 30 min at 37 °C with 250 μg/ml of unlabelled mAb before addition of 10 μg/ml of biotin-labelled mAb for 2 h at 37 °C. Antibodies were biotinylated with a 20-fold molar excess of biotin using EZ-link Sulfo-NHS Biotinylation kit (Thermo Fisher Scientific, USA). Bound biotinylated antibody was detected with 1/1000 streptavidin-horseradish peroxidase (Sigma–Aldrich, USA) and developed as described by Hewitson et al. (2011) (link).
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5

Surface Expression of Human Riboflavin Transporter

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NCM460 cells maintained for 14 days in RF deficient and OS media were biotinylated using an EZ-Link Sulfo-NHS-Biotinylation Kit (Thermo Fisher Scientific Inc., Rockford, IL) and then lysed. In order to isolate biotinylated proteins, an equal amount of total soluble protein from NCM460 cells maintained in RF deficient or OS media was then incubated with avidin-conjugated agarose. The agarose-avidin beads were washed three times following manufacturer’s protocol and the bound biotinylated protein eluted by heating with DTT at 95°C. The eluted protein samples were subjected to western blot analysis in a NuPAGE 4–12% Bis-Tris gradient minigel (Invitrogen). For normalization, an equal protein concentration of total NCM460 cell lysate was loaded simultaneously and the level of surface expression of hRFVT-3 was determined using hRFVT-3 specific primary antibodies. After washing with PBST the blots were probed with IRDye 800 labeled goat-anti rabbit (1:30,000) secondary antibody. Specific bands for hRFVT-3 were detected and quantified as described previously.
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6

Measuring Integrin αvβ3 Receptor Binding

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Purified αvβ3 receptors (Sino Biological Europe GmbH, Eschborn, Germany) were diluted to 0.5 μg/mL in coating buffer containing Tris-HCl (20 mmol/L; pH 7.4), NaCl (150 mmol/L), MnCl2 (1 mmol/L), CaCl2 (2 mmol/L) and MgCl2 (1 mmol/L). An aliquot of diluted receptors (100 μL per well) was added to 96-well microtiter plates (MW 96F Medisorp Straight Nunc, Thermo Fischer Scientific, Waltham, MA, USA) and incubated, overnight, at 4 °C. The plates were then incubated with blocking solution (coating buffer plus 5% bovine serum albumin) for an additional 2 h at room temperature to block nonspecific binding followed by 3 h incubation at room temperature with various concentrations of test compounds in the presence of vitronectine (1 μg/mL, Sigma Aldrich, Merck KGaA, Darmstadt, Germany) biotinylated by using EZ-Link Sulfo-NHS-Biotinylation kit (Thermo Fisher, Waltham, MA, USA). After washing, the plates were incubated for 1 h at room temperature with streptavidin–biotinylated peroxidase complex (GE Healthcare, Chicago, IL, USA), followed by 30 min incubation with substrate reagent solution (100 μL; R&D Systems) before stopping the reaction by addition of H2SO4 (2 N, 50 μL). Absorbance at 415 nm was read with a BMG Labtech Fluostar Optima microplate reader. All the experiments were performed in triplicates and data collected were analyzed using the GraphPad 5.0 Software Package.
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7

Production and Characterization of Biotin-Conjugated CR2-Crry

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CR2-Crry was produced and characterized as previously described19 (link), 27 (link). Briefly, CR2-Crry was expressed in Chinese hamster ovary (CHO) cells transfected with plasmids encoding mouse CR2-Crry and further purified from the cultural supernatants by anti-mouse CR2 affinity chromatography19 (link), 27 (link). Biotin-conjugated CR2-Crry was generated by EZ-Link Sulfo-NHS-Biotinylation Kit (21425, Thermo Scientific) and the level of biotin conjugation with CR2-Crry was measured by biotin binding assay according to the manufacturer’s instructions. Equivalent amount of biotin was prepared in 1 X phosphate buffered saline (PBS) buffer as vehicle control.
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8

Cell Surface Biotinylation and Protein Precipitation

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Cell surface biotinylation was performed using the EZ-Link Sulfo-NHS-Biotinylation kit (Thermo Fisher Scientific) according to the manufacturer’s instructions. Biotinylated cells were lysed in ice-cold RIPA buffer (Fig. S1 f) or a buffer containing 25 mM Tris-HCl, pH 7.4, 150 mM NaCl, 5 mM EDTA, and 1% Triton X-100 (Fig. 6 c), and biotinylated surface proteins were precipitated from the clarified lysates using streptavidin agarose (Thermo Fisher Scientific).
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9

Binding Assay for SubB Glycoprotein

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Purified SubBΔS106/ΔT107 was labelled with biotin using the EZ-Link® Sulfo-NHS-Biotinylation Kit (Thermo Scientific) according to the manufacturer’s instructions. Purified human and bovine α−1 acid glycoprotein (Sigma cat. nos G9885 and G3643) were dissolved in water at 5 mg/ml and 5 μl volumes of serial two-fold dilutions were spotted onto nitrocellulose filters and air dried at 37 °C overnight. Filters were then blocked with 5% skim milk in Tris-buffered saline with 0.05% Tween 20 (TTBS) for 2 h. After washing three times in TTBS, filters were overlaid with 1 μg/ml biotin-SubBΔS106/ΔT107 in TTBS and incubated overnight at 4 °C. Filters were then washed three times in TTBS and bound biotin-SubBΔS106/ΔT107 was detected using streptavidin-alkaline phosphatase conjugate (Roche). Filters were developed using a chromogenic nitro-blue tetrazolium/X-phosphate substrate system (Roche).
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10

Isolation and Profiling of Memory B Cells

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PBMC were isolated via a standard Ficoll gradient. Informed consent in writing was obtained from each donor. B cells were enriched from PBMC using Dynabeads Untouched Human B cells Kit (Thermo Fisher). For further analysis, B cells were incubated with human Fc block (BD Biosciences) for 10’ at RT, followed by biotinylated HBsAg for 30’ on ice (HBsAg by Roche Diagnostics; EZ-Link Sulfo-NHS-Biotinylation kit, Thermo Fisher). Memory B cell staining: 30’ on ice in PBS+0.5% BSA with live-dead stain (Thermo Fisher), anti-CD19-eF450 (eBioscience), anti-IgG-Pe-Cy7 (BD) and Streptavidin-APC (eBioscience). Cells were analyzed via flow cytometry on Cytoflex S (Beckman Coulter) or sorted with MoFlo II (Beckman Coulter) into lysis buffer, i.e. PBS+12U RNasin (Promega), 100 mM DTT (Thermo Fisher). PCR plates were sealed and stored at -80°C. IgG gene identification via PCR and sequencing from single B cells was performed as described elsewhere (16 (link)).
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