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12 protocols using hiscript 2 supermix

1

Quantification of Gene Expression in Lung Cancer Cell Lines

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TRIzol reagent was used to extract total RNA from BEAS‐2B, H1975, and H1395 cell lines (Thermo Fisher, USA). cDNA was produced using the HiScript II SuperMix (Vazyme, China) from 500 ng of RNA. ABI 7500 System was used to perform qRT‐PCR using the SYBR Green Master Mix. The PCR amplification conditions were 45 cycles of 94°C for 10 min,94°C for 10 s, and 60°C for 45 s each. The internal reference was GAPDH. The primer pair sequences for the genes that were being targeted are listed below:
GeneForward primer sequence (5′‐3′)Reverse primer sequence (5′‐3′)
TNFSF14GGTCTCTTGCTGTTGCTGATGGTTGACCTCGTGAGACCTTCGCT
CCNB2CAACCAGAGCAGCACAAGTAGCGGAGCCAACTTTTCCATCTGTAC
FADDCTCCTGCGCGAGCTGCTCGCGCCTTCTCCAATCTTTCCCCAC
CORO1ACCAACATCGTCTACCTCTGTGGCTCACACTTGTTCACCTCCAGG
ABL1CCAGGTGTATGAGCTGCTAGAGGTCAGAGGGATTCCACTGCCAA
GAPDHAATGGGCAGCCGTTAGGAAAGCCCAATACGACCAAATCAGAG
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2

Quantitative analysis of gene expression

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TRIzol reagent was employed for the extraction of total RNA from BEAS-2B, NCI–H209, and NCI–H526 cell lines (Thermo Fisher, USA). The HiScript II SuperMix (Vazyme, China) was utilized to generate cDNA from 500 ng of RNA. The qRT-PCR was conducted in the ABI 7500 System (Thermo Fisher, USA) with the SYBR Green Master Mix. The PCR amplification conditions included 45 cycles of 94 °C for 10 min, followed by 94 °C for 10 s, and 60 °C for 45 s each. GAPDH acted as the internal reference The following is a list of the sequences of primer pairs for the genes that were being targeted.
GeneForward primer sequence (5′-3′)Reverse primer sequence (5′-3′)
ADCY4GAGCCTACCTATCTGGTCATCGGACTCCAGGTAACGGGTCATCA
E-cadCGAGAGCTACACGTTCACGGGGGTGTCGAGGGAAAAATAGG
N-cadTCAGGCGTCTGTAGAGGCTTATGCACATCCTTCGATAAGACTG
VIMGACGCCATCAACACCGAGTTCTTTGTCGTTGGTTAGCTGGT
FN1AAGAAGGGCTCGTGTGACAGTCTTGTCCTACATTCGGCGG
BCL-2ATCGCCCTGTGGATGACTGAGTGCCAGGAGAAATCAAACAGAGGC
BAXTCAGGATGCGTCCACCAAGAAGTGTGTCCACGGCGGCAATCATC
CASP3GGAAGCGAATCAATGGACTCTGGGCATCGACATCTGTACCAGACC
CASP9GTTTGAGGACCTTCGACCAGCTCAACGTACCAGGAGCCACTCTT
GAPDHCTGGGCTACACTGAGCACCAAGTGGTCGTTGAGGGCAATG
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3

Quantitative RT-PCR Analysis of Gene Expression

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Total RNAs of GES-1, AGS and SGC7901 were extracted using TRIzol reagent (Sigma-Aldrich, St. Louis, MO, USA). 500 ng of the RNA were used to synthesize cDNA applying the HiScript II SuperMix (Vazyme, Nanjing City, China). QRT-PCR was carried out in ABI 7500 System using the SYBR Green Master Mix (Thermo Fisher Scientific, Waltham, MA, USA). GAPDH was an internal reference. The sequence list of primer pairs for the target genes was as follow:
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4

Isolation and Characterization of Primary Endometrial Epithelial Cells

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Freshly collected endometrial tissue from the implantation stage was transferred to a culture dish, cut into pieces, and digested with collagenase at 37 °C for 30 min. The digestate was filtered using a filter to remove endometrial stromal cells and obtain primary endometrial epithelial cells. Total RNA was extracted from the samples. The isolated RNA (500 ng) was reverse-transcribed into complementary DNA using the HiScript II SuperMix (Vazyme, Beijing, China). qRT-PCR analysis was performed using the SYBR green master mix with the ABI 7500 System (Thermo Fisher Scientific, Waltham, MA, USA). The PCR conditions were as follows: 46 cycles of 94 °C for 10 min, 94 °C for 10 s, and 60 °C for 45 s. GAPDH was used as an internal reference.
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5

Quantitative Analysis of Gene Expression

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Total RNA was isolated from cells, sEVs, and tissue using TRIzol reagent (Invitrogen). Then cDNA was synthesized from at least 1 μg of RNA using the HiScript II SuperMix (Vazyme Biotech Co., Ltd., China). Quantitative polymerase chain reaction (qPCR) was carried out with a QuantStudio 6 Flex Real-Time PCR System (Life Technologies, Carlsbad, CA) using SYBR Premix ExTaq (Vazyme Biotech Co., Ltd., China) and gene-specific primers (Table S1). The data were analyzed using the 2−ΔΔCT method, with Actin as internal control.
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6

RNA Extraction and qRT-PCR Analysis

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Total RNAs of decidua tissues were extracted using Trizol (Invitrogen) according to manual instructions. Quantitative RT-PCR (qRT-PCR) was performed using the HiScriptII Supermix (Vazyme, Nanjing, China) following the manufacturer’s instructions. Briefly, RNA was quantified using a Nanodrop One instrument (Thermo, MA, USA) and 1 μg was used for reverse transcription using random primers. For qRT-PCR, SYBR Green master mix and primers (final concentration at 200 nM) were used and results were analyzed in CFX Connect PCR detection system (Bio-Rad, CA, USA). Primers were designed according to a previous publication (22 (link)) for CCL8 and GAPDH, or using an open resource (www.ncbi.nlm.nih.gov/tools/primer-blast) for TRDV1, TRDV2, and TRDV3, whose sequences are listed in Supplementary Table S2. Expression levels were normalized to GAPDH and represented as fold change compared to the control (2−ΔΔCt).
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7

Quantitative RT-PCR Analysis of Gene Expression

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The total RNA from GM12878, THP-1 and U937 cell lines (Thermo Fisher, USA) was extracted using TRIzol reagent. cDNA was created from 500 ng of RNA using the HiScript II SuperMix (Vazyme, China). By applying the SYBR Green Master Mix, RT-qPCR was carried out in ABI 7500 System (Thermo Fisher, USA). 45 cycles of 94 °C for 10 min, 94 °C for 10 s, and 60 °C for 45 s each comprised the PCR amplification conditions. Table 1 displayed the list of the sequences of primer pairs for targeted genes.

The primers of genes

GenesForward primer sequence (5’-3’)Reverse primer sequence (5’-3’)
CD83AAGGGGCAAAATGGTTCTTTCGGCACCTGTATGTCCCCGAG
NRIP1GGATCAGGTACTGCCGTTGACCTGGACCATTACTTTGACAGGTG
ACSL1CCATGAGCTGTTCCGGTATTTCCGAAGCCCATAAGCGTGTT
METTL7BGCAACCGCAAGATGGAGAGGATTTGGGTCTAGGCAGGTGA
OGTTCCTGATTTGTACTGTGTTCGCAAGCTACTGCAAAGTTCGGTT
C4orf48CGTCCGAATGGGCGTTTTCTGCATGAACTCGAAGGCGT
GAPDHAATGGGCAGCCGTTAGGAAAGCCCAATACGACCAAATCAGAG
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8

Comparative RNA Extraction and Analysis

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TRIzol (Thermo Fisher, United States) reagent was used to extract the total RNA from Hep3B, Huh-7, and THLE-2 cell lines. cDNA was created from 500 ng of RNA using the HiScript II SuperMix (Vazyme, China). The PCR amplification conditions comprised 46 cycles of 94°C for 10 min, 94°C for 10 s, and 60°C for 45 s. GAPDH acted as the internal reference. The primer sequences for target genes are listed in Table 2.
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9

Quantitative Real-Time PCR Analysis of Immune-Related Genes

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Extraction of total RNA from hFOB1.19, MG-63 and Saos-2 cell lines (Thermo Fisher, USA) was conducted using TRIzol reagent. HiScript II SuperMix (Vazyme, China) was employed to separate cDNA from 500 ng of RNA. QRT-PCR was carried out in ABI 7500 System (Thermo Fisher, USA) with the use of SYBR Green Master Mix and PCR was amplified for 45 cycles at 94 °C for 10 min (min), at 94 °C for 10 s (s), and at 60 °C for 45 s. GAPDH was an internal reference. Primer sequneces for the genes were listed as Table 1.

The sequences of primers for target genes.

Table 1
GeneForward primer sequence (5′-3′)Reverse primer sequence (5′-3′)
TLR4CCCTGAGGCATTTAGGCAGCTAAGGTAGAGAGGTGGCTTAGGCT
LY96CCCTGTATAGAATTGAAAGGATCCTGCGCTTTGGAAGATTCATGGTG
IFNGR1AGTGCTTAGCCTGGTATTCATCTGGGCTGGTATGACGTGATGAGTG
CD4CCTCCTGCTTTTCATTGGGCTAGTGAGGACACTGGCAGGTCTTCT
CASP1GCTGAGGTTGACATCACAGGCATGCTGTCAGAGGTCTTGTGCTC
GAPDHAATGGGCAGCCGTTAGGAAAGCCCAATACGACCAAATCAGAG
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10

Transcriptomic Analysis of Hepatic Cell Lines

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Total RNA from HepaRG, SK-HEP-1 and THLE-2 cell lines was extracted utilizing TRIzol (Thermo Fisher, USA) reagent. Applying the HiScript II SuperMix (Vazyme, China), cDNA was synthesized from the RNA (5000 ng). The PCR was conducted under the amplification conditions of 45 cycles at 95 °C for 30 s (s), 95 °C for 10 s, and at 60 °C for 30 s. GAPDH was an internal reference. The sequences of primer pairs for the genes were displayed in Table 1.

The primers information of genes.

Table 1
GeneForward primer sequence (5′-3′)Reverse primer sequence (5′-3′)
IL7RGAAGCAGGGACATAGAGCAACTTCTAGCCAGGCATCTTAGGG
PIP4K2AAAGAAGAAGCACTTCGTAGCGATGGCTCAGTTCATTGATCGAG
P2RY6GTGAGGATTTCAAGCGACTGCTCCCCTCTGGCGTAGTTATAGA
GZMHCAGCAGAGCCACTGAGATTTTACCTTGGGCTACGTCCTTA
WARSAGCACCTACCAGTAATCATGGCTCCAAACCGAACAATGAGCTT
CCR7ATTTGTTTCGTGGGCCTACTGTCATGGTCTTGAGCCTCTTGA
MMP9GTGTGAGTACCCGGAACGAGTGTATCCGGCAAACTGGTCC
GAPDHAGGTCGGTGTGAACGGATTTGTGTAGACCATGTAGTTGAGGTCA
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