The largest database of trusted experimental protocols

21 protocols using 3h ryanodine

1

Radioligand Binding Assay for Ryanodine Receptor

Check if the same lab product or an alternative is used in the 5 most similar protocols
Binding of [3H]ryanodine (PerkinElmer Inc., Waltham, MA, USA) to skeletal membrane vesicles was measured at 37°C for 90 min with constant shaking in buffer consisting of 200 μg protein ml–1, 5 nm [3H]ryanodine, 250 mm KCl, 25 mm PIPES and 200 μm AEBSF (pH 7.2). RyR1 channel modulators Ca2+, Mg2+, caffeine and adenine were included in specific experiments as described where appropriate. Non‐specific binding was determined in the presence of a 1000‐fold excess unlabelled ryanodine. Bound and free ligand were separated by rapid filtration through Whatman GF/B glass microfibre filters (GE Healthcare Life Sciences, Little Chalfont, UK). [3H]ryanodine retained in filters was quantified by liquid scintillation spectrometry using a scintillation counter. Measurements were performed in triplicate and each experiment was performed using at least three independent skeletal muscle preparations.
+ Open protocol
+ Expand
2

Ryanodine Receptor Binding Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
[3H]Ryanodine binding to crude membrane extracts (0.1 mg/ml) was performed at equilibrium (90 min at 37°C) in the presence of 250 mM KCl, 20 mM Hepes (pH 7.4) and 5 nM [3H]ryanodine (PerkinElmer Life Sciences) in the presence of a cocktail of protease inhibitors (Complete™, EDTA-free, Roche). Free Ca2+ concentrations were obtained by combination of 1 mM EGTA with specific amounts of CaCl2 according to calculation with the WEBMAXC Extended program (http://www.stanford.edu/~cpatton/maxc.html). Non-specific binding was determined by incubating the vesicles with 5 μM unlabelled ryanodine. Separation of bound and free ligand was performed by rapid filtration through Whatman GF/B glass fibre filters using a 24-well Brandel cell harvester as described previously [13 (link)].
+ Open protocol
+ Expand
3

Cardiac ryanodine receptor binding

Check if the same lab product or an alternative is used in the 5 most similar protocols
[3H]-ryanodine binding was measured in whole homogenates from frozen hearts (0.5 mg protein/mL) following 90 min incubation at 37°C with 10 nM [3H]-ryanodine (Perkin Elmer, Boston, MA) in 150 mol/L KCl, 0.5 mmol/L AMPPNP at pCa 5, as previously described [20 (link)].
+ Open protocol
+ Expand
4

Radioligand Binding Assay for Ryanodine Receptors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Binding assays were carried out following a protocol previously described (Federico et al., 2017 (link)). Binding mixtures contained 100 µg of protein from homogenates prepared from pooled atria (5–7 mice), 0.2 M KCl, 20 mM Hepes (pH 7.4), 6.5 nM [3H]ryanodine (PerkinElmer), 1 mM EGTA and enough CaCl2 to set free [Ca2+] between 10 nM (pCa2+ 8) and 100 µM (pCa2+ 4). The ratio between Ca2+ and EGTA was determined using MaxChelator (WEBMAXCLITE v1.15 http://maxchelator.stanford.edu/webmaxc/webmaxclite115.htm). Following a 2 hr incubation at 36°C, reactions were filtered through Whatman GF/B Filters using a Brandel M24-R Harvester. [3H]ryanodine binding was determined using a Beckman LS6500 scintillation counter and BioSafe II scintillation cocktail (RPI Corp). Non-specific binding was quantified in the presence of 2 µM unlabeled ryanodine (MP Biomedicals) and subtracted.
+ Open protocol
+ Expand
5

Ryanodine Receptor Binding Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
[3H]Ryanodine binding to rabbit skeletal SR was carried out as described previously (Schwartz et al., 2009 (link); Xiao et al., 2016 (link)). Briefly, Intrepicalcin was diluted directly into the incubation medium (10 μM CaCl2, 0.2 M KCl, 10 mM Na-HEPES, pH 7.2) to obtain a final concentration of 1 pM to 20 μM. To evaluate the effect of Intrepicalcin on Ca2+ sensitivity of [3H]ryanodine binding activity, a fixed concentration of Intrepicalcin at 100 nM was added to the standard incubation medium containing 0.2 M KCl, 1 mM Na2EGTA, 10 mM Na-PIPES (pH 7.2) and CaCl2 to set free [Ca2+] in the range of 10 nM to 10 mM. Ca2+/EGTA ratio was determinated with the computer program MaxChelator (http://www.stanford.edu/~cpatton/maxc.html). [3H]Ryanodine (95 Ci/mmol, PerkinElmer, USA) was directly diluted in the incubation medium to a final concentration of 5 nM. Protein concentration of heavy SR was 0.3 mg/mL and was calculated by Bradford method. The incubation lasted for a period of 120 min at 36 °C. Samples (100 μL) were always run by duplicate, filtered on Whatman GF/C glass filters (Whatman, Clifton, NJ, USA) and washed twice with 5 mL of distilled water using a Brandel M24-R cell harvester (Gaithersburg, MD, USA). Non-specific binding was determined in the presence of 20 μM unlabelled ryanodine, and has been subtracted from each sample.
+ Open protocol
+ Expand
6

Radiolabeled Ryanodine Receptor Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
[3H]Ryanodine was obtained from Perkin Elmer Life Sciences, protease inhibitors from Sigma-Aldrich, and phospholipids from Avanti Polar Lipids.
+ Open protocol
+ Expand
7

Ryanodine Receptor Binding Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
RyR1 activity was estimated by measuring the extent of bound 3[H]ryanodine in microsomes isolated from rabbit skeletal muscle when incubated with free Ca2+ alone (10 μM to 2 mM range), or in the presence of 2 mM ATP or 2 mM AMP-PCP (ACP) sodium salts. Concentrations of total Ca2+ added to the reaction mixture were estimated in Maxchelator (https://somapp.ucdmc.ucdavis.edu/pharmacology/bers/maxchelator). Preincubated membrane vesicles (~40 μg) were allowed to bind 5 nM [3H]ryanodine (PerkinElmer) in a buffer containing 50 mM MOPS (pH 7.4), 0.15 M KCl, 0.3 mM EGTA, protease inhibitors, and 2 mM DTT for 3 hr at 37°C. Sample aliquots were diluted sevenfold with an ice-cold wash buffer (0.1 M KCl) before placing onto Whatman GF/B filter papers in a vacuum-operated filtration apparatus. The remaining radioactivity in the filter papers after washing three times with the wash buffer was measured by liquid scintillation counting. Nonspecific ryanodine binding was estimated in the presence of 250 μM unlabeled ryanodine (Calbiochem) and subtracted from the total binding. Data represent the mean specific [3H]ryanodine binding from four independent experiments.
+ Open protocol
+ Expand
8

RyR1 and RyR2 Protein Expression in HEK Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
[3H]Ryanodine was obtained from PerkinElmer (Waltham, MA), unlabeled ryanodine from Calbiochem (La Jolla, CA), protease inhibitors from Roche (Indianapolis, IN) and Sigma-Aldrich (St Louis, MO), and human embryonic kidney (HEK) 293 cells from ATCC. Full-length wild type RyR1 cDNA was provided by Dr. Gerhard Meissner (University of North Carolina, Chapel Hill). Full length wild type RyR2 and R1 chimera cDNAs were provided by Dr. Junichi Nakai (Saitama University, Japan).
+ Open protocol
+ Expand
9

Radioactive Ryanodine Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
[3H]Ryanodine was purchased from PerkinElmer. Ryanodine was purchased from Abcam. Caffeine was obtained from Sigma.
+ Open protocol
+ Expand
10

Quantifying Active Ryanodine Receptors

Check if the same lab product or an alternative is used in the 5 most similar protocols
To determine the maximum number of active RyRs, [3H]-ryanodine binding assays were performed using LV homogenates as previously reported [19 (link),22 (link)], with some modifications. Briefly, 50 μg of protein per tube were incubated with 7 nM [3H]-ryanodine (PerkinElmer, Waltham MA, USA) for 90 min at 37°C in an incubation medium containing (in mM): 200 KCl, 20 HEPES (pH 7.2 with KOH), and CaCl2 necessary to set free Ca2+ at 10 μM, as calculated by MaxChelator (http://maxchelator.stanford.edu/index.html). The samples were filtered onto glass fiber filters (Whatman GF-B, GE Healthcare, Chicago IL, USA) and washed three times with distilled water in an automatic collector (Brandel M24-R). The filters were placed in scintillation vials with 5 mL of liquid scintillation mixture, and the retained radioactivity was measured in a Beckman LS-6500 counter. The specific [3H]-ryanodine binding was defined as the difference between the binding in the absence (total binding) and the presence (nonspecific binding) of 20 μM unlabeled ryanodine (MP Biomedicals LLC, Santa Ana CA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!