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5 protocols using anti ide

1

Western Blot Analysis of Alzheimer's Proteins

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The hippocampi of Tg2576 mice (n = 3/group) were sonicated in Ripa lysis buffer (20 mM Tris-HCl (pH 8.0), 150 mM NaCl, 1 mM EDTA, 0.1% SDS, 1% Igepal, 50 mM NaF, 1 mM NaVO3) containing a protease inhibitor cocktail. Proteins (15–45 μg) were separated by gel electrophoresis on 3–8% Tris-acetate or 10–20% Tris-Tricine gels (Life Technologies), transferred to nitrocellulose membranes and incubated with the following antibodies: anti-APP CTF (1:1000, BioLegend, London, UK), anti-Aβ1-16 (clone 6E10, 1:500, BioLegend), anti-nicastrin (1:500, New England Biolabs, Hitchin, UK), anti-β-secretase-1 (BACE, 1:750, New England Biolabs), anti-low-density receptor-related protein-1 (LRP-1, 1:2500, Insight Biotechnology, Wembley, UK), anti-IDE (1:750, Abcam, Cambridge, UK), anti-neprilysin (1:500, Abcam, Cambridge, UK), anti-fibronectin (1:750, AbD Serotec) and anti-collagen IV (1:500, Sigma Aldrich). Membranes were stripped and reprobed with anti-glyceraldehyde-3-PDH (GAPDH) antibody (1:50,000; Sigma Aldrich) to ensure equal protein loading. Immunoblots were repeated twice per antibody and quantified by densitometry using Image J software. Means ± S.E.M. were calculated as an optical density ratio of protein levels normalized to GAPDH levels.
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2

Proteomic Analysis of Hippocampal Proteins

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Proteins were isolated from the hippocampus of brain according to the protein extraction kit instructions (Beyotime Biotechnology, China). Protein concentrations were determined using the BCA protein assay kit (Bioworld, USA). Equal volumes of protein were separated using 10% dodecyl sulfate, sodium salt polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes. Membranes were blocked in 5% non-fat milk for 1 h and incubated overnight at 4 °C with primary antibodies as follows: 6E10 (1:1000; Covance, USA), anti-APP (1:1000, Abcam Technology, UK), anti-PSD95 (1:1000, Cell Signaling Technology, USA), anti-SYN (1:1000, Abcam Technology, UK), anti-IDE (1:1000,Abcam Technology, UK), anti-ADAM10 (1:1000, Millipore Technology, USA), anti-BACE1 (1:1000, Millipore Technology, USA), anti-PS1 (1:1000, Cell Signaling Technology, USA), and anti-GRPDH (1:2000, Cell Signaling Technology, USA). Membranes were rinsed with Tris-buffered saline with Tween 20 (TBST) three times. Then, membranes were incubated with HRP-conjugated anti-rabbit or anti-mouse secondary antibodies for 2 h. Protein signals were visualized with the chemiluminescence reagents provided with the ECL kit (Bioworld, USA), and quantitation of proteins was determined by densitometric analysis using ImageJ software (Bio-Rad, Hercules, USA).
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3

Western Blot Antibody Panel for AMPK

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Primary antibodies used for Western blotting: anti-phospho-AMPKα2Thr172, anti-AMPKα2, anti-phospho-acetyl-CoA carboxylaseSer79, and anti-ACC (Cell Signaling Technology, Boston, MA, USA); antiphospho-CaMKIITyr305 and anti-CaMKII (Abcam); anti-IDE, anti-GAPDH, anti-phospho-IR, IR, anti-phospho-AKT, and AKT (Santa Cruz Biotechnology).
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4

Protein Expression Analysis in Pig Tissues

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Total proteins were extracted from pig tissues and PSMSCs using protein extraction reagent containing protease and phosphatase inhibitor (Thermo Scientific). Equal amount of denatured proteins was separated by 10% SDS-PAGE and then transferred to nitrocellulose membranes (Millipore). Thereafter, the membranes were blocked with 5% non-fat milk for 1 h at room temperature followed by primary antibodies incubation overnight at 4°C. The primary antibodies were anti-IDE (1:1000, ab33216) and anti-MSTN (1:1000, ab201954) from Abcam, anti-MYOD (1:500, sc-377460) and anti-MYOG (1:250, sc-13137) from Santa Cruz Biotechnology, and anti-PCNA (1:1000, 2586), anti-CCNE1 (1:1000, 4129), anti-P53 (1:800, 2524), anti-BAX (1:500, 2772), anti-BCL2 (1:500, 3498), and anti-GAPDH (1:1000, 2118) from Cell Signaling Technology. HRP-conjugated secondary antibodies were used to incubate the membranes for 1 h at room temperature. The blots were developed using Pierce ECL Western Blotting Substrate according to the manufacturer’s instructions (Pierce). The protein bands were visualized on a Tanon-5200 Chemiluminescent Imaging System (Shanghai, China) and quantified via calculating integrated density with ImageJ software. The protein expression was normalized to endogenous GAPDH.
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5

Liver Protein Extraction and Western Blot

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Liver samples were taken from the mice and snap-frozen in liquid N2 and then stored for subsequent protein extractions. The tissue samples and cells were lysed in ice-cold lysis buffer for 30 min. The supernatant was boiled with Laemmli sample buffer for SDS-PAGE. Antibodies were sourced as follows: anti-FADD (1:500) (Abcam); anti-IDE (1:500), anti-SIRT1 (1:1,000), anti-β-actin (1:2,000), and anti-GAPDH (1:2,000) (Santa Cruz Biotechnology); HRP goat-anti-mouse IgG (1:3,000), HRP goat-anti-rabbit IgG (1:3,000), and HRP rabbit-anti-goat IgG (1:1,000) (Jackson ImmunoResearch Europe)
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