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Semi dry transfer device

Manufactured by Bio-Rad
Sourced in United States

The Semi-dry transfer device is a laboratory equipment used for the rapid and efficient transfer of proteins or nucleic acids from a gel to a membrane for further analysis. It utilizes a simple and direct electrical current to facilitate the transfer process, making it a convenient and time-saving option for researchers.

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8 protocols using semi dry transfer device

1

Western Blot Analysis of NSC Cultures

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NSC cultures were seeded in 10 cm2 dishes at a density of 100, 000 cells/cm2. NSCs were infected (MOI 10) or stimulated 16 h after plating, lysed in RIPA buffer containing 50 mM Tris-HCL, pH 7.6; 150 mM NaCl; 0.1% sodium deoxycholate, 0.1% sodium dodecylsulfate, 0.1% NP-40, 1 mM EDTA, and a protease inhibitor cocktail (all from Sigma). Lysates were subjected to SDS-PAGE with 4 to 12% Tris-Tricine gels (Life Technologies). Proteins were blotted onto nitrocellulose membranes (GE-Healthcare, Pittsburgh, PA, USA) using a semi-dry transfer device (Biorad, Hercules, CA, USA). Western blot was performed using Tris-Buffered-Saline (TBS) containing 0.1% Tween-20 as the wash buffer, TBS containing 5% non-fat dry milk and 3% BSA as the blocking buffer, and primary or horseradish peroxidase-conjugated secondary antibodies diluted in blocking buffer. Detection was carried out by using a chemoluminescence kit (Sigma). Analysis was performed with a Chemidoc system (Bio-Rad, Hercules, CA) using conditions when signals were not saturating.
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2

Characterization of HPV16 L1 VLPs

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Equal amounts (500 ng) of HPV16 L1 protein (Abcam), purified L1:P18I10 and L1:T20 VLPs were mixed with 2× Laemmli sample buffer containing 5% 2-ME and boiled at 95 °C for 5 min. Samples were separated by 8–16% TGX Stain-free protein gels and then transferred to a PVDF membrane (Millipore, Burlington, MA, USA) using a Semi-Dry transfer device (Bio-Rad). The membrane was blocked with 5% skim milk in TBST. Then, the membranes were probed with the anti-HPV16 L1 CAMVIR-1 mAb at a dilution of 1:4000, anti-HIV-1 gp120 V3 loop mAb (NIBSC, EVA3012) at a dilution of 1:40 and HIV1 gp41 (2F5) mAb (NIBSC, ARP3063) at a dilution of 1:4000, respectively. After that, the membranes were incubated with anti-mouse IgG Peroxidase Conjugate (Sigma-Aldrich) at a dilution of 1:4000. The Western ECL substrate kit (BIO-RAD) was used for signal development. The blot images were acquired by using Odyssey Fc imaging system at a chemiluminescence channel.
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3

Western Blot Analysis of TDP-43 and Centrosomal Proteins

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Triton X-100-soluble and insoluble fractions as well as centrosomal fraction were run on an SDS-PAGE gel of 10% acrylamide/bis-acrylamide. Gels were transferred on nitrocellulose membranes with a semi-dry transfer device (Bio-Rad). Membranes were blotted with primary antibodies: rabbit anti-TDP-43 polyclonal antibody (10782-2-AP, 1:5000), rabbit anti-TDP-43 (C-terminal) polyclonal antibody (12892-1-AP, 1:1000), mouse anti-TDP-43 (human specific) monoclonal antibody (60019-2-Ig, 1:1000), mouse anti-γ-tubulin monoclonal antibody (T5326, 1:5000), and mouse anti-lamin B1 monoclonal antibody (ab8982, 1:1000). Membranes were then washed in PBS and incubated with peroxydase conjugated anti-rabbit and anti-mouse secondary antibodies (Sigma), and finally revealed and imaged by chemiluminescence using the ChemiDoc (Bio-Rad). Quantification of luminescence intensity were performed with Image Lab software (Bio-Rad). References of reagents and antibodies are detailed in Supplementary Table 2.
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4

Protein Expression Analysis by Western Blot

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Total protein (30 µg per lane) underwent 10% SDS-PAGE and was transferred onto a polyvinylidene fluoride membrane with a semi-dry transfer device (Bio-Rad Laboratories, Inc., Hercules, CA, USA) for 10 min. The membrane was blocked with blocking buffer (TBS with 0.1% Tween-20 and 5% skim milk powder) at room temperature for 1 h. The blocked membrane was incubated with a primary antibodies in TBST at 4°C overnight (ACSL1 monoclonal antibodies, 1:1,000, cat. no. ab177958; β-actin polyclonal antibody antibodies, 1:1,000, cat. no. ab8227; Abcam, Cambridge, MA, USA) Following washing, the membrane was incubated with secondary antibodies (Hydroxypyruvate reductase conjugated sheep anti-rabbit immunoglobulin G; 1:3,000; cat. no. ab 97051; Abcam) at 4°C for 1 h. The membrane was developed using an enhanced chemiluminescence kit (Thermo Fisher Scientific, Inc.). To analyze the relative expression level of each protein, densitometric analysis was performed using Image Lab 4.1 software (Bio-Rad Laboratories, Inc.).
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5

HPV16 L1 Protein and VLP Analysis

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Equal amounts (200 ng) of HPV16 L1 protein (Abcam) and L1:P18I10 VLPs purified from both methods were mixed with 2× Laemmli sample buffer containing 5% 2-ME and boiled at 95 °C for 5 min. Samples were separated by 8–16% TGX Stain-free protein gels and were then transferred to a PVDF membrane (Millipore) using a Semi-Dry transfer device (Bio-Rad). The membrane was blocked with 5% skim milk in TBST. Then, the membranes were probed with the anti-HPV16 L1 CAMVIR-1 mAb at a dilution of 1:4000 and anti-HIV1-V3 loop mAb (NIBSC, EVA3013) at a dilution of 1:500, respectively. After that, the membranes were incubated with anti-mouse IgG Peroxidase Conjugate (Sigma-Aldrich) at a dilution of 1:4000. The signal was developed and visualized by chemoluminiscence using Western Blot ECL substrate kit (Bio-Rad). The blot images were acquired by using Odyssey Fc imaging system.
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6

Western Blotting of Target Proteins

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To detect the target proteins through western blotting, the proteins separated by SDS PAGE were transferred to a PVDF membrane (Bio-Rad) using a semidry transfer device (Bio-Rad). Membranes were incubated with TBST solution (Tris-buffered saline with 0.1% Tween® 20 detergent) containing primary antibodies. Anti-GFP (Thermo) and anti-TAP (Thermo) were purchased; anti-Act1 was derived from the Taiwan yeast resource center. anti-uL8 and anti-eS24 were generated in this lab. Protein signals were detected by ClarityTM ECL Substrate (Bio-Rad). Images were acquired with MultiGel-21 (TopBio, Taiwan).
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7

Western Blot Analysis of Signaling Proteins

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Cell lysates were prepared, electrophoresed on 12% SDS-polyacrylamide gels, and then transferred to PVDF membranes using a Semi-dry transfer device (Bio-Rad, USA). Immunoreactive proteins were detected with antibodies to p-JNK (Abcam, Cambridge, UK) or BECLin-1 (Abcam, Cambridge, UK) using ECL (Thermo Scientific, Waltham, MA, USA) and a goat anti-mouse HRP secondary antibody (Abcam, Cambridge, UK). Blots were exposed to film for 1–2 h in the Amersham Imager 600 device (GE healthcare, Pittsburgh, PA, USA).
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8

N-terminal Sequencing of Purified Proteins

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To verify the identity of the purified proteins, N-terminal sequencing was performed. Samples from different M711 production culture conditions were subjected to SDS-PAGE (12.5%) and then transferred onto methanol activated - polyvinylidene fluoride (PVDF) membranes in a semidry transfer device (Biorad, CA, United States) soaked in transfer buffer (25 mM Tris, 192 mM glycine, 20% methanol, pH 8.3) for 1 h 15 min at 15 mV. The resulting transferred membranes were stained with Ponceau S stain (ThermoFisher, MA, United States), and the visible protein bands were subjected to N-terminal sequencing by Edman degradation (Edman and Begg, 1967 (link)) in a Protein sequencer (Applied Biosystems, Procise 494, CA, United States), as performed by the Protein Chemistry service from the Margarita Salas Center for Biological Research.
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