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9 protocols using sh sy5y human neuroblastoma cell line

1

Isolation and Culture of PDLCs and SH-SY5Y Cells

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PDLCs were obtained from impacted human wisdom teeth removed at the Department of Dentoalevolar Surgery of the Semmelweis University (Budapest, Hungary) under ethical guidelines approved by the Ethical Committee of the Hungarian Medical Research Council. This study was approved by the Semmelweis University Regional and Institutional Committee of Science and Research Ethics, the number of the ethical permissions are 17458/2012/EKU and 25459/2019/EKU. Isolation of PDLCs was performed according to our previously published protocol [15 (link),81 (link)].
The PDLCs were cultured in Minimal Essential Medium Alpha (αMEM, Gibco, Thermo Fisher, Waltham, USA) supplemented with 10% fetal bovine serum (FBS, Gibco), 2 mM L-glutamine (Gibco), 100 units/mL penicillin and 100 mg/mL streptomycin (Gibco).
The SH-SY5Y human neuroblastoma cell line was purchased from Sigma-Aldrich (Budapest, Hungary) and maintained according to the manufacturer’s protocol. The growth medium of these cells consisted of a 1:1 mixture of Eagle’s MEM and Ham’s F12 medium supplemented with 15% FBS (Gibco), 2 mM L-glutamine (Gibco), 100 units/mL penicillin, and 100 mg/mL streptomycin (Gibco), as well as 1% non-essential amino acids (NEAA, Gibco).
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2

Differentiation of SH-SY5Y Neuroblastoma Cells

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An SH-SY5Y human neuroblastoma cell line (ATCC CRL-2266; Sigma-Aldrich, Saint Louis, MO) was cultured in 1:1 (v/v) DMEM/F12 media supplemented with 2 mM glutamine, 10% heat-inactivated fetal bovine serum (FBS) and 1% antibiotics including penicillin and streptomycin. Cell cultures with three to four passages were used for the experiments in compliance with ATCC recommendation. After reaching 70–80% confluence, cells were subcultured on poly-D-lysine plates with 10 μM retinoic acid in a reduced serum media (1% FBS) to induce postmitotic differentiation.27 (link) Differentiation was confirmed by the change to polygonal morphology and extension of long neurites. Cells were cultured at 37 °C in a fully humidified atmosphere containing 5% CO2.
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3

Oleocanthal Treatment on Differentiated SH-SY5Y Cells

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The SH-SY5Y human neuroblastoma cell line was obtained from Sigma-Aldrich (Milan, Italy). Cells were grown in DMEM supplemented with 10% (v/v) of FBS, 2 mM glutamine, 50 U/mL of penicillin, and 50 μg/mL of streptomycin and maintained at 37 °C in a humidified incubator with 5% CO2 as previously reported [64 (link)]. Cell differentiation was induced, reducing serum levels of the medium to 1% with 10 µM of RA for seven days prior to treatments. Differentiated SH-SY5Y were treated with oleocanthal for 1 or 24 h. Oleocanthal was dissolved in DMSO and kept at −20 °C until use. The control group was treated with an equivalent volume of the vehicle alone. Oxidative stress was induced by exposing cells to 700 µM H2O2.
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4

SH-SY5Y Cell Transduction Protocol

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SH-SY5Y human neuroblastoma cell line (Sigma 94030304) was cultured in DMEM/F12 (Gibco 11330032) supplemented with 1× GlutaMAX (Gibco 35050-061), 1× Penicillin/Streptomycin (Sigma P4333-100ML) and 15 % heat-inactivated FBS (Gibco 10270-106).
Cells (200,000 per well of a 6-well plate) were plated. Cells were transduced the day after and each lentivirus was mixed with spent medium (500 ng (GV) ml−1, 1 ml total). Three wells were transduced individually for each shRNA-coding lentivirus (2–4 shRNA sequences per target or 1–2 per nontargeting shRNA were tested; see cloning for details). Medium was changed the day after transduction and cells were then collected 4 days post-transduction in RIPA buffer (500 µl per well) containing 2 tablets of cOmplete EDTA free protease inhibitor cocktail (Roche 11873580001) and 1 tablet of PhosSTOP (Roche 0490684500) per 20 ml of buffer.
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5

Neurotoxicity Evaluation of Protein Aggregates

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To test the previously described neurotoxic effects of the examined aggregates in vitro, we used a differentiated SH-SY5Y human neuroblastoma cell line (Sigma-Aldrich), with the related culturing and differentiating methods based completely on our previous works [7 (link), 26 (link)]. Five-day-old animals (as determined by BSI) were chosen for the experiments, an age that precedes the beginning of the reproductive stage (i.e., egg production) by 2 days. Before treatment (using micropipette) of individual rotifers with aggregated molecules (0.1, 10 and 100 μg/mL), the stock solutions (1 mg/mL) were ultrasonicated (Emmi-40 HC, EMAG AG, Mörfelden-Walldorf, Germany) for 10 min at 45 kHz to achieve sterilization and homogenization. During the in vivo experiments, the viability assay, the assessments of descriptive characteristics (such as normalized mean lifespan /NML/, body size index /BSI/, bright light disturbance /BLD/, mastax contraction frequency /MCF/, and cellular reduction capacity /CRC/), and the assembly of the experimental setup (with the oil-covered microdrop) were carried out as presented in detail previously [34 (link)].
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6

Tau and Methylene Blue Effects on SH-SY5Y Cells

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The SH-SY5Y human neuroblastoma cell line was provided by Sigma-Aldrich. Cells were grown in Dulbecco’s modified Eagle´s medium (DMEM) supplemented with 2 mM L-glutamine, 100 mU/mL penicillin, 0.1 mg/mL streptomycin, and 10% heat-inactivated fetal bovine serum (FBS). Cells were maintained at 37 °C and incubated in humidified atmospheric air containing 5% CO2. After 1 day, the cells were exposed to 10 nM tau and/or 10 nM MB for 24 h. Afterward, The Ca2+-ATPase activity was also assayed in membranes prepared from SH-SY5Y cells, as described above.
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7

Neuroblastoma Cell Line Differentiation

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The SH-SY5Y human neuroblastoma cell line was obtained from Sigma-Aldrich (cat. n° 94030304) (St. Louis, MO, USA). Cells were expanded in a growth culture medium composed of high glucose Dulbecco’s Modified Eagle’s medium (DMEM), supplemented with 10% fetal bovine serum (FBS), 2 mM glutamine, 50 U/mL of penicillin, and 50 μg/mL of streptomycin, and cultured at 37 °C with 5% CO2 as previously reported [31 (link)]. Cell differentiation was induced by reducing serum levels of the medium to 1% with 10 µM retinoic acid (RA) for seven days prior to treatments [32 (link)]. SF (LKT Laboratories, Minneapolis, MN, USA), EGCG and PB (Sigma-Aldrich, St. Louis, MO, USA) were dissolved in DMSO, and 10 mM stocks were kept at −20 °C until use. Differentiated SH-SY5Y cells were treated with 1 μM SF, 2.5 μM EGCG, and 0.5 μM PB and SEP (1 μM SF + 2.5 μM EGCG + 0.5 μM PB,) for 24 h or 6 h according to the different experiments. Oxidative stress was induced, as previously reported [33 (link)], by exposing cells to 700 µM H2O2 in 1% FBS DMEM.
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8

SH-SY5Y Neuroblastoma Cell Differentiation

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The SH-SY5Y human neuroblastoma cell line was obtained from Sigma-Aldrich (Milan, Italy). Cells were grown in DMEM supplemented with 10% (v/v) FBS, 2 mM glutamine, 50 U/mL of penicillin and 50 μg/mL of streptomycin and maintained at 37 °C in a humidified incubator with 5% CO2 as reported in [40 (link)]. Cell differentiation was induced reducing serum levels of the medium to 1% with 10 µM of RA for seven days prior to treatments. Differentiated SH-SY5Y were treated with plain and hill extracts for 24 h. Extracts were dissolved in DMSO. The control group was treated with an equivalent volume of the vehicle alone. Oxidative stress was induced exposing cells to 700 µM H2O2 for different times depending on the assay.
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9

Culturing SH-SY5Y Neuroblastoma Cells

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The SH-SY5Y human neuroblastoma cell line was obtained from Sigma-Aldrich (Milan, Italy). Cells were grown in DMEM supplemented with 10% (v/v) FBS, 2 mM glutamine, 50 U/mL penicillin, and 50 µg/mL streptomycin and maintained at 37 °C in a humidified incubator with 5% CO 2 , as reported in 47 . Cells were used for experiments after reaching 80-90% confluence.
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