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5 protocols using grp78

1

Protein Extraction and Detection

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Leupeptin, pepstain, aprotinin, phenylmethylsulfonyl fluoride (PMSF), dithiothreitol (DTT), Triton X-100 (TX100), sodium dodecyl sulfate (SDS), propidium iodide and other chemicals, as well as antibodies to beta-actin, Iba-1, and GFAP were purchased from Sigma (St. Louis, MO). Antibodies to Hsp40, Hsp70, Hsp90, Grp78, Grp94, calnexin, and PDI were purchased from Stressgen Biotechnologies, Inc. (San Diego, CA). Active caspase 3 and HSF1 antibodies were purchased from Cell Signaling Tech (Danvers, MA). Secondary antibodies were purchased from Jackson ImmunoResearch Labs (West Grove, PA).
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2

Liver Protein Expression Analysis

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100 mg liver was homogenized in 1 ml lysis buffer containing protease inhibitor (Roche). Cells were collected and protein concentration was measured by BCA protein reagent. Samples were subjected to electrophoresis on appropriate percentage gels and transferred to polyvinylidene-fluoride membranes. Sortilin (Abcam, 16640), apoB (Abcam, 31992), phos eIF2α (Cell Signaling Technologies, 119A11), Grp78 (Stressgen, SPA826), and actin (1:10,000; MilliporeSigma, A5441) were used. All primary antibodies were incubated overnight at 4°C. Species-specific secondary IgG antibodies conjugated with peroxidase (1:10,000 to 1:15,000) were incubated for 1 hour at room temperature. Protein bands were visualized using Immobilion Cresendo or Classico Western HRP Substrate (MilliporeSigma).
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3

Protein Extraction and Western Blot Analysis

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Lysates of tissues from individual mice were extracted by 3 freeze-thaw cycles followed by homogenization in ice-cold radioimmunoprecipitation assay buffer (50 mmol/l Tris-Cl, 150 mmol/l NaCl, 1% NP-40, 0.5% sodium deoxycholate, and 0.1% SDS) containing cocktails of proteinase inhibitors and phosphatase inhibitors (Roche), and centrifuged for 15 min at 13,000 g. Proteins were separated by 8% or 12% SDS-PAGE, transferred to nitrocellulose membrane (Pall), and subjected to Western blotting10 (link). Primary antibodies included GRP78, GRP94, CNX and CRT (1:2,000; Stressgen), and β-actin (1:5,000; Sigma). Western blotting was repeated two to four times and signal intensities were measured using the Quantity One system (Bio-Rad).
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4

Western Blot Analysis of Astrocytes

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Samples from the CPu or from cultured astrocytes were solubilized in buffer containing 1% NP40, 0.1% sodium dodecyl sulfate, and 0.2% deoxycholate and were subjected to western blotting with the following antibodies: tyrosine hydroxylase (TH; EMD Millipore, Billerica, MA, USA), glial fibrillary acidic protein (GFAP; Dako, Glostrup, Denmark), GRP78 (StressGen, Victoria, British Columbia, Canada), heme oxygenase-1 (HO-1; Abcam, Cambridge, UK), and β-actin (Sigma). Primary antibody binding was visualized using the ECL system (GE Healthcare Bio-Sciences Corp., Piscataway, NJ, USA).
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5

Immunohistochemical Analysis of Mouse Brain Sections

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Immunohistochemical analysis was performed as previously described [27 (link)]. In brief, brains were removed from mice after perfusion with 4% paraformaldehyde and postfixed in the same fixative for 4 hours at 4°C. After being cryoprotected in 30% sucrose, brains were cut in serial coronal 10 μm-thick sections containing the CPu (from Bregma +1.34 mm to Bregma +0.26 mm) and the midbrain covering the whole SNpc (from Bregma −2.80 mm to Bregma −3.80 mm) on a cryostat. Brain sections were mounted in series on ten slides (around ten sections were mounted on each slide). One out of these ten slides, representing a set of sections 100 μm apart, was processed for immunohistochemistry with the following antibodies: TH, GFAP, GRP78, HO-1, Ub (StressGen), α-synuclein (BD, Franklin Lakes, NJ, USA), and LC3B (Cell Signaling Technology, Danvers, MA, USA). In some cases, the cell nuclei were visualized with 4′,6-diamidino-2-phenylindole (DAPI; Sigma). Alexa488-conjugated (Thermo Fisher Scientific, Rockford, IL, USA) or Cy3-conjugated (Jackson ImmunoResearch Laboratories, West Grove, PA, USA) secondary antibody was used for visualization of immunolabeling.
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